Vata004373.1
Basic Information
- Insect
- Vanessa atalanta
- Gene Symbol
- GATA-B
- Assembly
- GCA_905147765.1
- Location
- LR990551.1:46338-55590[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-18 2.1e-14 53.1 3.9 1 34 162 194 162 196 0.97 2 2 3.2e-19 1.2e-15 57.1 7.1 1 34 230 262 230 264 0.97
Sequence Information
- Coding Sequence
- ATGAATGTAAGCGGGCCGAGGGCGTCGCGACGTTGCTGCGGGGAGGCGGGGAGCGGAGGCGGTGGAGGCGCGGCCTACACGCGTTGTGCGTACCCGACCGCCGGCTCGCCTTACTTCAGCAACGGTGCAGACCTCACGCAGCCGCAGATATGGACCTCAGCTGCAGGAGGATCGCCGAACTACGGCACCGCTAGTGGCGCTGGCTCAGTGCTCGGTGAGGAATATGGTGATACGGGAGAGGCGGGCGAGAGCGGAGGGGCGGGAAGCGGGGGCGCACTGCCCGCCTTTAGCGCTCGTTTCGGAGGCGCCTTCGCCAGCGCCACTTCCAGGCCGTCCACTGTATACGGCACCACCGCGCTGGCTACGAACGCTTATGCACAACCGGAAGTATGGAGTCTAGACGGCAGCCGACGGCCGCAGCTCTCCGCCGCCGCCAGCCTCTCAGCCATCGATATGGCGGAGTTTTTCACGGAGGGTCGCGAGTGCGTGAACTGCGGGGCCATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCACACGCGCTGGCGCCCGCTCCCGACATGGGCACGAAGCGGCCGGGCATGTCTTGCAGCAACTGTCACACGACCACCACCTCGCTGTGGCGTCGCAACGCGCACGGCGAGACCGTCTGCAACGCCTGCGGCCTGTACTACAAGCTCCACAACATCAACCGTCCGCTCGCTATGAAGAAAGACTCCATACAGACGAGAAAGCGGAAACCTAAGAACAGCATGAAGGCCGAGAGAAGTTTGAGTAAGAGTTTAGTGAACGCGGCGCACGCGGCGCACGCGGCGCACTCGGCGCACAACTCGCACAACTCGCACTCGGTCGGAGCCGCCGTCAAAATGGAGAACCTGCTGGAGGGCGGCGCGACCGGCGGCGCGGGCTCGGGCGCGCGCTCCCCGCTGACGCTCGGCTTCTACGTGCAGCAGCACGCCGCCGCCGTGAAGCTGGAGGAGCCGCCGCCCGCGCACGCGCACCAGCACGCGCACCAGGCGCACCACCCGCACCAGGCGCACCACGCGCACCACGCGCAGTCCTTCTACGACGAGACGGAGTACCGGCGCGCGGAGCCGCAGGAGCGCCTCGAACGCCCGACCGTCGTGTCGTTGGGCAGCTGA
- Protein Sequence
- MNVSGPRASRRCCGEAGSGGGGGAAYTRCAYPTAGSPYFSNGADLTQPQIWTSAAGGSPNYGTASGAGSVLGEEYGDTGEAGESGGAGSGGALPAFSARFGGAFASATSRPSTVYGTTALATNAYAQPEVWSLDGSRRPQLSAAASLSAIDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAPAPDMGTKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKAERSLSKSLVNAAHAAHAAHSAHNSHNSHSVGAAVKMENLLEGGATGGAGSGARSPLTLGFYVQQHAAAVKLEEPPPAHAHQHAHQAHHPHQAHHAHHAQSFYDETEYRRAEPQERLERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796987;
- 90% Identity
- iTF_01080378;
- 80% Identity
- -