Basic Information

Insect: Vanessa atalanta
Gene Symbol: Hivep2
Assembly: GCA_905147765.1
Location: LR990580.1:3083969-3093987[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 26 5.9 2.1 1 23 210 233 210 233 0.96

2 10 0.42 32 5.6 0.4 2 23 241 262 240 262 0.96

3 10 1.5 1.2e+02 3.8 1.6 1 23 266 289 266 289 0.89

4 10 6e-05 0.0046 17.6 0.0 2 23 324 346 323 346 0.96

5 10 3.5e-05 0.0027 18.4 0.1 1 23 353 375 353 375 0.97

6 10 0.24 18 6.3 5.6 3 23 383 403 382 403 0.96

7 10 0.00066 0.051 14.4 0.1 1 23 411 434 411 434 0.93

8 10 4.6e-05 0.0035 18.0 1.9 1 23 440 463 440 463 0.90

9 10 2.8e-05 0.0022 18.7 1.2 3 23 474 494 473 494 0.98

10 10 0.0092 0.71 10.8 0.3 2 23 501 523 500 523 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	26	5.9	2.1	1	23	210	233	210	233	0.96
2	10	0.42	32	5.6	0.4	2	23	241	262	240	262	0.96
3	10	1.5	1.2e+02	3.8	1.6	1	23	266	289	266	289	0.89
4	10	6e-05	0.0046	17.6	0.0	2	23	324	346	323	346	0.96
5	10	3.5e-05	0.0027	18.4	0.1	1	23	353	375	353	375	0.97
6	10	0.24	18	6.3	5.6	3	23	383	403	382	403	0.96
7	10	0.00066	0.051	14.4	0.1	1	23	411	434	411	434	0.93
8	10	4.6e-05	0.0035	18.0	1.9	1	23	440	463	440	463	0.90
9	10	2.8e-05	0.0022	18.7	1.2	3	23	474	494	473	494	0.98
10	10	0.0092	0.71	10.8	0.3	2	23	501	523	500	523	0.92

Sequence Information

Coding Sequence: ATGGCTGTAGATTTAAAATTTAATTTAAATGTTAGTTTAAATAGGGATGAGACAAGAGTGTCTCAAGATAAGATTTGCATTTCTTGTTTAAAAAAAGAAGTGCCTTTTATAACTTTGTCAAATTGTGTACATATTAAGGTTTTCGATTTTCTACTGGACTGTAAGATGGAGTTACTGGACCATTTAATATGCTACACATGCCATAGTGTGATAAAAAAAATACAAGACTTTAAAAATCAAGTCAATCACAGCATGAATAAATTGTATCATGAGTCAAAATATCTGAAAACAGTGAATGTATACACACAGAGTCTTCAATTTTCAAATATAGAAATAAATTCAACAATAAAATCACAACCGATCGAAGTTCAAATATTAGAACCGACAGCCACAGATACATTCATAGATATAGAAACGGAAGTTAAAATCGAACGTAAATCCGACACCGAACAGGACGTGCCTTTGATAGAGTTGCAGAAAGAAAAAAAAAGAACGAAAGTCAGCAAGGCGAAGACGCCATTACAAAAAAAATACGAAGGGAAAATACGTACAATAATGCTGAGCGAGGAGGAAATGCTGGATGAAAGGAAAGATGAAGCGTTGAAGAACAGTTATTTAAAATTACCATTTAAATGTGCATTTTGTATAACGGGTTTCGACCATGAATTGACATTGAAAAATCACATGGAGAAACGTCACGGTAAAAAGAGCGACGGCATTGAATGTAAGATCTGCAATTCAATTCTGGGCACGAAGACGTCGTACGATGAACATTATAAAAGGCATTTTAGAAGATACGAGTGCGTTGAATGCGGCCGACGCAATAACAACGTCTATACGGTGCTGAAGCATTACAACGAATGTCATGGAAGGATAAAGACGAAGTTCTCGTGTAAATTATGTGATTTTTCCACAGAGTCGCACAGAATCTACCGTTATCACCGCGACAAGCATCGCACGAAGAAGGTCGAATGTGAACTGTGTGGCAACTCCTTTGTCAACAATGCCGGCCTGAAGATTCATATGTTCACGGTGCACCGGCAGTCGAGTCGCGTGTATTCGTGCGACAAGTGCGGCAAGGTGTACCGCGCCAAGTCCGGTCTGGCGGCGCACGCGGCGAAGCACTCGCCCGCCGCGCCCGCGTACTGCGCCGACTGCGGCACGCACTTCCAGACGCACCTCGGCCTCAAGTACCACCTCAAGCACCACTCGCGGCACAGCGACAAGAGATTCGCCTGTAACGAATGCGATGCGAAATTCATAGTAAAGAGGTCGCTTCAAGACCACATAGACTGGATGCACTTGAACAACACTGAACACGCTTGCAACAAATGTACAAAGGTATTTATAAACAGTGCCAGTTTAAAGAAGCACAGGGAATTTGTCCATGAAAAGAAAAGGCCGCCGAGGAATAAGATCTGCGATCATTGCGGGAGAGGATTCACGTCGCTGTCTATCCTGCGGTCGCACATCCGAACGCACACGGGCGAGCGTCCCCTGCAGTGCGCGCAGTGCCCCGCCACCTTCGCGCACTCCGCCGCGCTCTACACGCACAACAAGCTATTACACACTAAAACCTAA
Protein Sequence: MAVDLKFNLNVSLNRDETRVSQDKICISCLKKEVPFITLSNCVHIKVFDFLLDCKMELLDHLICYTCHSVIKKIQDFKNQVNHSMNKLYHESKYLKTVNVYTQSLQFSNIEINSTIKSQPIEVQILEPTATDTFIDIETEVKIERKSDTEQDVPLIELQKEKKRTKVSKAKTPLQKKYEGKIRTIMLSEEEMLDERKDEALKNSYLKLPFKCAFCITGFDHELTLKNHMEKRHGKKSDGIECKICNSILGTKTSYDEHYKRHFRRYECVECGRRNNNVYTVLKHYNECHGRIKTKFSCKLCDFSTESHRIYRYHRDKHRTKKVECELCGNSFVNNAGLKIHMFTVHRQSSRVYSCDKCGKVYRAKSGLAAHAAKHSPAAPAYCADCGTHFQTHLGLKYHLKHHSRHSDKRFACNECDAKFIVKRSLQDHIDWMHLNNTEHACNKCTKVFINSASLKKHREFVHEKKRPPRNKICDHCGRGFTSLSILRSHIRTHTGERPLQCAQCPATFAHSAALYTHNKLLHTKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078540;
90% Identity: iTF_01508394;
80% Identity: -