Basic Information

Insect: Vanessa atalanta
Gene Symbol: -
Assembly: GCA_905147765.1
Location: LR990562.1:5518243-5530200[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00036 0.027 15.2 0.2 2 23 148 169 147 169 0.93

2 11 0.00052 0.04 14.7 2.4 1 23 175 197 175 197 0.96

3 11 0.00011 0.0088 16.8 0.5 1 23 292 314 292 314 0.98

4 11 3.1 2.4e+02 2.8 0.1 2 23 321 343 320 343 0.89

5 11 0.00089 0.069 14.0 0.0 3 23 403 424 401 424 0.90

6 11 0.0023 0.17 12.7 0.2 1 23 440 462 440 462 0.96

7 11 8.4e-06 0.00065 20.3 0.2 1 23 488 510 488 510 0.98

8 11 0.00055 0.043 14.6 0.2 1 23 516 538 516 538 0.97

9 11 0.00031 0.024 15.4 0.3 1 23 544 566 544 567 0.95

10 11 0.017 1.3 9.9 0.6 1 23 580 602 580 602 0.96

11 11 0.0055 0.42 11.5 0.1 1 20 752 771 752 774 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00036	0.027	15.2	0.2	2	23	148	169	147	169	0.93
2	11	0.00052	0.04	14.7	2.4	1	23	175	197	175	197	0.96
3	11	0.00011	0.0088	16.8	0.5	1	23	292	314	292	314	0.98
4	11	3.1	2.4e+02	2.8	0.1	2	23	321	343	320	343	0.89
5	11	0.00089	0.069	14.0	0.0	3	23	403	424	401	424	0.90
6	11	0.0023	0.17	12.7	0.2	1	23	440	462	440	462	0.96
7	11	8.4e-06	0.00065	20.3	0.2	1	23	488	510	488	510	0.98
8	11	0.00055	0.043	14.6	0.2	1	23	516	538	516	538	0.97
9	11	0.00031	0.024	15.4	0.3	1	23	544	566	544	567	0.95
10	11	0.017	1.3	9.9	0.6	1	23	580	602	580	602	0.96
11	11	0.0055	0.42	11.5	0.1	1	20	752	771	752	774	0.93

Sequence Information

Coding Sequence: ATGGACCTAAAAGACCAAATCAAAATGGAGGGGGAGGATTTTCATCTTCATTGGGAGGAGGATGTAAAGCGTAATATAGTTGCAAGTGAAGAAGTTATATGTGGCCTTGATAATGTGCAAAATGAAACATATACTAACATGACTGAAGAAATTATTGAAGATACTGATCAAATGGCAGCCGAAAATCTTATGTATTTATCACAAGATGTAGTTACCTATACAGAAAGTGCTGAGCTTGCTCAAGACCCAAACGTTGAATGTGTTACGGAAGAGGTTGTTACTGATGATTGGGTCATATCTGGTGGACAAGAAAGCTTTCCTTTCAGAGTGGAGGTGCCCTTAGAACATTTAGCTAATCCTATTCAAGACATAAAAATAGAAAATGACATTGATGTTCCACTACCAACAGATCAAGATGAATACACAGCTATGCGTCCGTGGCCTTGTGATTTCTGTTCACGGCGGTTTCGCAAAAAAGCGGCGTTGATGAATCACATGGTGGCGCACCAAAACGACCGCCCCCATGCTTGTAACCTGTGCGGTGTCCGATACGTGCGCAAGTGTGACCTCATGAACCATCTCAAGGTACACGCATTTGTGCCTGACAACCCGGAGCCCACGGACTACCAACATGATGAAATTATTGCTCATACACCATTATTAAAAACTAAGAAAAAGAGGGGACGCCGGAAAAAGACTGCTGAGCCTGTCGAGGAGCAGAACGGAGTGCGGGAGAACATGACCTCGGCCCGCACGCAGCAGTGGTCGCGTCGCGCGCGCGCGCCGTCCGCGCCGCCGCCCGCGCCTCCCTCGCCCTCGCCCTCCCCGCCGCCGCCGCCCACGCCGCCGCTGCCCGCGGATCCCTCCAGGCCCTTCGTCTGTCGGCATTGTGGCGTCGGCTTTGCGAGGGAGAAGGCACTTCAGTCACATTCTAGAGTGCACGGCGGCGACTCGCCCGTGGAATGCGGCGAGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGCGCTCGCACGCGGCGTCGCGACACCCGCACCTCGCGCACGCGCCCTCCGCGCCCAAGCGGGAACCCTCCTACGACGATTGCAACTCCGGTGACGATATGGAATTCCGCCTATCACCACTGGCACACAGCGGCAGCGAGCGCGGCGAGAGGGAGCGCGACCGCGAGCGCGGCACGCTGGACGTACGGGGGCCCGAGCTCTTCTGTGGCGACTGCGGCGTGGCCTTCCAGCGCGCCGACCTCCTGAGGCGACACGTCGCCGCTGCGCACAGTTATAAACGGCACGATAGCACGAGCAGCACATGGGAGCAGGAGCACACTTGCGACGTGTGCGGCGAGAGCTGCCCCGACGCGCTGCAACTGCTCGCGCACGCCGAGCGACATGCGGAGCGCCCACGTACCAACCGAATGAAGAGACTGGCCCGTGGTCGAAACAATACTTCGAGTAATTCAAGGCAGTTCCCATGCAGAGAATGCGGCAAAGTATTCGGATCTCGCAGCTCACAGCAGATCCACATTCGCATACACACTGGTGAGCGGCCCTACGCGTGCCGTTTTTGTTGGAAAGCCTTCGCAGATGGCGGCACGTTGCGCAAGCACGAGAGAATACACACTGGTGAAAAACCGTACGCATGTGCGGTGTGTCCGCGCGCGTTCAACCAACGCGTCGTGTTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGACGCGCTAATGGTGGCTATCAATATTGCTGCGTAGTTTGTGGACGACCTTTACATTCAAGTGCTGAATTAGTCCAACATCTCATTCAGCACTGTGATGAAAATACAGCGCTGAAAAGGCAACCCCAGAATGGACCAAGAAAGTACAAACGACGGCGAAAAGCGAGAGTGGAGGAGTCACCTGTACACAATGACTGGGAGCGTGCTACTACACCTTCACCCGCGCGTTCAGCCTCACCCGCTGGCGCGCCGTCGCCCTCGCCCTCCCCGCCTCGTCCCACGCGTGCCACCCGCGCGCCGCGCGCCTACTCGCCGCCGCGCCGCCGTCGCCGTCGCGCCCCACCCCCGCCGCGACCCAAGATGATTCACACGGAGGAGCCTCGGCCCAGGACGAAACAGGTCCGGAGTCGCAGGCCTCCCAGACACCCAGCGGACGACTTGAGAGCAATCGGACCTCATTCTCCGTCACCGGCTCCAGCCTCACCCGTACCATCTCCGCCCTCTCCCTCTCATCTCACGACTACTACGGATGAAGGGCCATACAAATGTGAAATGTGCTCTTTGGAGTTTCCACGACGTGATGCCTTGCTTCTTCATGTTCCTGTTCACATATGA
Protein Sequence: MDLKDQIKMEGEDFHLHWEEDVKRNIVASEEVICGLDNVQNETYTNMTEEIIEDTDQMAAENLMYLSQDVVTYTESAELAQDPNVECVTEEVVTDDWVISGGQESFPFRVEVPLEHLANPIQDIKIENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNPEPTDYQHDEIIAHTPLLKTKKKRGRRKKTAEPVEEQNGVRENMTSARTQQWSRRARAPSAPPPAPPSPSPSPPPPPTPPLPADPSRPFVCRHCGVGFAREKALQSHSRVHGGDSPVECGECGELCWSREALRSHAASRHPHLAHAPSAPKREPSYDDCNSGDDMEFRLSPLAHSGSERGERERDRERGTLDVRGPELFCGDCGVAFQRADLLRRHVAAAHSYKRHDSTSSTWEQEHTCDVCGESCPDALQLLAHAERHAERPRTNRMKRLARGRNNTSSNSRQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGYQYCCVVCGRPLHSSAELVQHLIQHCDENTALKRQPQNGPRKYKRRRKARVEESPVHNDWERATTPSPARSASPAGAPSPSPSPPRPTRATRAPRAYSPPRRRRRRAPPPPRPKMIHTEEPRPRTKQVRSRRPPRHPADDLRAIGPHSPSPAPASPVPSPPSPSHLTTTTDEGPYKCEMCSLEFPRRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00824972;
90% Identity: iTF_01508280;
80% Identity: -