Vata001532.1
Basic Information
- Insect
- Vanessa atalanta
- Gene Symbol
- kn
- Assembly
- GCA_905147765.1
- Location
- LR990559.1:3861488-3914672[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-241 1.2e-236 786.9 0.0 11 387 122 505 113 508 0.98 2 2 8.4e-10 1.9e-05 23.5 6.9 420 563 514 656 506 668 0.72
Sequence Information
- Coding Sequence
- ATGCTGAAGAACGTAAGTGGCGCCACCTGCATCAGTCGCGTCGTCCCGCTCTTGAGGCGAGGGCGTGTCCCTAGGGCACCTCCCACAGTCCGCGGGGACGGACGGGGGCACCGCGATGCCCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGCGTCCGCTCGTCGAGATTCGGTCGGACGAGTTGAACGCGGCGGCGGGCGGGTACACCGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCCGTGGGATGGGGCCGCAAGCTGTACCCGTCTGGAGCGCCGAGATCATCAGGTGGTCTGATGTTTGGCCTTCACCACCAAGAGGCGGCGGGGGTTCACGCTCAGCCGCGAGGACCCGTCACTTCTCTGAAAGAAGAGCCACTCACACGAGCTTGGATGACTCCCACTTCTTTAGTTGACAATACCAACAGTGTGGGCGTAGGGCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATCTGCGCAAGAGCAACTTCTTCCACTTTGTCGTAGCGCTCTACGATCGCGCCGGTCAGCCGGTAGAAATAGAAAGGACCGCGTTCATAGGCTTCATTGAGAAAGATCAAGAAGCTGAAGGTCAAAAAACAAACAATGGTATTCAATATCGACTACAATTGCTTTATGCAAACGGTATACGGCAAGAACAGGACATCTTCGTTCGATTAATAGACTCTGTCACGAAACAGCCCATCGTCTACGAAGGTCAGGATAAGAACCCGGAAATGTGCAGAGTGTTGCTCACACACGAAGTTATGTGCAGTCGATGTTGTGATAAGAAAAGTTGCGGCAACAGAAATGAAACTCCATCGGATCCTGTCATTATAGATCGATTTTTTCTAAAATTCTTCCTGAAATGCAATCAAAATTGTTTGAAAAACGCCGGCAACCCGCGGGATATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTCATGGTGGACGGTCCACTGCTGGCGATATCGGATAACATGTTCGTCCACAATAACAGTAAACACGGGAGACGAGCGAAGCGACTTGATCCGTCTGAAGGTACTGACGCCGCGCCCGAGCCTAATTCGGGGCTATACCCACCGTTGCCTGTAGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGTTCTACGGTCATAATAGTAGGGGATAACTTTTTCGATGGTCTCCAAGTCGTGTTCGGAACTATGTTAGTTTGGAGCGAGCTTATAACGTCACACGCGATTAGAGTACAAACTCCACCACGACACATACCCGGCGTCGTGGAAGTTACTCTTTCTTATAAGAGCAAGCAATTCTGTAAGGGAGCACCTGGAAGATTTGTTTATGTTTCTCTCAACGAGCCGACAATAGATTACGGATTCCAGAGACTACAGAAACTTATACCGAGACATCCGGGTGATCCTGAAAAACTGCCCAAGGAAATAATACTGAAGCGAGCGGCAGATTTAGCGGAGGCTTTGTATTCTATGCCTCGTAACAACCAACTGGGACTCGGGGCGCCGCGCTCGCCGCCCGCCAGTATGCCGTTCAACTCTTACACGGGGCAGCTGGCTGTCAGTGTACAGGACACTGCCGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCCGCCTACGCGCCGCAGCACTACCCCGCGCCGCCCTCCTCGCTCTTCAACTCCTCCTCGCTGTCTCTAGGACCGTACCATCCGGCGAACATGAACGGACATATATCCTCCGAACACTATAACATGTATAGCACGAAAGATAGCGAGTATTACGCTGAAAGAAATGGCGAGTGTAAGAATGAATGTCCTGTAAACACTCATACGAAATGCAGTGACGGGCTTGGCAAAGGGAAGGCCAGAAGTGCGTTCGCAGTCGTCAGAAATAGTCCACCTCGTAATTTACAACATCAAAATTGGCAACATCTCGCCGTCCAGTGTTAG
- Protein Sequence
- MLKNVSGATCISRVVPLLRRGRVPRAPPTVRGDGRGHRDARALGGALPRRLRPLVEIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAYAPQHYPAPPSSLFNSSSLSLGPYHPANMNGHISSEHYNMYSTKDSEYYAERNGECKNECPVNTHTKCSDGLGKGKARSAFAVVRNSPPRNLQHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843290;
- 90% Identity
- iTF_00843290;
- 80% Identity
- -