Ucar025830.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- ZMIZ1
- Assembly
- GCA_960531455.1
- Location
- OY482673.1:12176633-12187146[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.22 5.3e+03 -1.3 0.7 3 24 628 649 626 654 0.87 2 2 3.7e-24 8.7e-20 71.6 4.6 1 50 713 762 713 762 0.98
Sequence Information
- Coding Sequence
- ATGAACGCCGGCAGCGGCTCCTCGAGGGCGCCAGCCTCCGGGAGCCAAATATCACCACAACTACCCGACgtacaaacacaacaacaacagcaacagcagcagcagcaacaacaaccacaacaacagcagcatcagcaacaacaacacctgcaacaacagcaacaacaccaCCTACAGCAGCAACAACACACTGCGCAACAAAATAATTCCTACGGCAATCCAAACTATCCCAACGTATACACGAATAGCAGCAGTAATACGTCCGCACACAGCCAACAACAAAATGGCCTCACATCCATGGGCGGCTATTCGATGGGTGAACCAGATTCGTTGCGCACACTAAAGAATACATTTGGGCCAAATTCGGAATTTACAGCAACAGCCGGTTACGGCAGCTATAGTAATATGGTTACGGCTAATGGTGGTGCtatgcagcagcagcagcaacaacaacaaatggaTAATATGAGTGGCATGGGCAGCGGATATGGGCAGATGGGTGCCAATCAAATGCATGGCGGCAACGTGCAAAATCTTTACATGAATGGCAATATCGGCACCAATGGCAGCGGCAGTCCAAGTACTGCCAACATGAATAGCGCTGGCGGCCCTCAAGTGGGCGGTGGTAATCCAGGTATGGGCATGAATTCAGCAGCTAATATGCAAATGGGTCACATGAGCGCTTACAATGGAGTTGGCCCCAATGGCAGTCCTGGTATGGGACCATCCAGGCATCAAATGAACCCCATGAGCCAGATGCAAAGCATGACTATGGGCGGTGGCGTTGGTGGGTCACAATTAACAccccaacaacagcaacaggcAATGAGCAGTGGTTTGGGACCGATGGCCAAGATGCAGGGCATGGCGAATGGCGGTTATCCGCGTCGCAGCGCCCCCTACCCTAATCCACAGATGCATGCGGTGCAGAAACGCGCCGGCTACACCTCAATGGGTAATCCCGCCGCACTACAGAATGTTCCTCCGCAAATGGGCGGCATGCAACATTATGGCCAACAAATGCATCCTCAAGCGGGCAGCGGCGTACCGGTGCCCATGCAAGCGAGCGCCTACGGGCGTGGCAGTCCAATGGGCGGCTATGGCCGTGCGAATGGAATGGGACCCATGGGTATGGGACCGGGTGGCGGAATGGGTCATGGTGGTGGCATGGGTCCAGGCGGTGGCATGGGCCCCGGCGGCGGCATGTGTCCAAGCAATATGGTCCCAGGCGGTGGCATGGGACCGGGCGGTATGGGACCTGGCAGCATGGGTCCAAGTGGTATGAGTGCAATGCAACGTGGTATGCCACAAGGCGGTCCCGGCGGTTATGGTGCCGCAATGGCGCATCAACCCAGTCAATACTATCCGGGCATGAATGGCGGCGGTGGTGTTGGCGCAGGCGGTGGCGGCGGTATGGGTCCGGCTGGTCCGGGCGCCATGTCCAATACCGGCGCAATGTACCAGAATCAAGGTTTCCAGCAAAATTACCAACACAGTCCAGTTCCTGGTAATCCGACGCCGCCATTAACACCTGCCTGCAGCGTTCCATACATCAGTCCGAATCCAGATATCAAACCAATTATGGATAACTGCGAGGAAATGCGACTGACATTCCCCGTACGCGACGGCATCATACTTCCACCGTTCCGCTTGCTGCATAATCTCTCTGTTAGTAATCATGTTTTCCATTTGAAACAGAACGTCTACAATACGCTCATGTGTCGTTCGGATCTCGAGCTGCAGCTAAAATGCTTCCATCAGGATGACCGGCAAATGAATACCAATTGGCCGCATACGGTTACTGTCTCAGCGAATGCCACACCCCTCACAATTGAACGTTCCGAGAAGACGGGTCAGGCCTTGCGGCCGCTTTACTTGAAGGCGGTTTGTCAGCCCGGACGTAATACTCTGCAATTAACCGCTAGTTCCTGCTGTTGTTCCCACTTGTTCGTGCTGCAGCTAGTCCATCGACCATCCGTGCGGCACGTCCTCCAGAGTCTGCATAAGCGCAATTGCTTACCCGTCGATCATTGTGTAGCCAAAATCAAACGTAACTTCATGGTCTGCTCAACGACCAGCGTGCCACTAGAAGCCGGCGGCGCTGCCAACATGGACCAGGCGACCAAATGCACGAAGATCTCATTGAAATGTCCGATCATGAAGTCTCGAATACGAATGCCCGCGCGAGGACACGAATGCAAGCATATCCAGTGTTTCGATCTGGAAGCTTATCTGCTAATGAATTGCGAACGCGGCGCTTGGCGGTGTCCCGAATGCAATAAACCCGCGCTCACCGAAAGTTTAGAAATTGATCAGTATATTTGGGCCATTTTGGATAAATTAAGCGGCACTGATGTGGACGAGGTTATCATCGATTCTAGCGGTAATTGGCGAGCGGCGCAAGGCATGCATCAAGGCTCGCCACTCAACTCCATGTCAGCACAAGTACCGAACCCAATGTCTGCGCAAATGATCGGCCAAGGGCCAGGGCAGATGCCTGGGCAAATGGGTGGTGGCAGTCAGGGACCTGCACAAATGGGCGGCCCAGCGCATGGACCGATGCCAGGCCAAATGGGCGCTCAATCGGCAAATCAAATGGGCCCAATGGGCGGAAGTCAAATGCCGGGACAAATGTCAAGTCAAATGGGACCCATGGGCGGTGGTGGTCCTATGAATAGTCAAATGCCTGGTCAGATGGTTGGACAAATGGGCGGCCCAATGGGCGGTGGTGGCCCGAATGTGGCGAGTATTAAGCAGGAGAATACCTTCGACGATCAATCGAAAGTGATGTCACCATGGGACAATTCGCAGGCGATGAGTCCTTACATGCAGCAGCACGACATGAATGCGGGCACGCCCAATGTACCCGGCGCTGGTCAAATTCGCAGTCCATTCGATATGTACGGCGGAGCTAGTGATGTTGGTGTTAATGATCAGCATACGGGTGATACGGGCAATTCTTTGGATCAGCTGAATGCCATGGAGAAAAGTCTAACAGATCAGATGCCTCATACGCCGCATACACCCATGCACCCGATGACACCCGGCGGACCACCGAGTGTGAGTTCGGCACATAATGAGCCCTCAACGCCGAATGCGAATATCTCAAATGCCTCACCACAAACACCGGGCACACCCGGCGGACCACCATCCAATAGAGCTAATGCAAATGAAAcacatcagcagcagcagcagtcaGTCCAGCAATCACAACAAGAACAAATTATTAATTCGTTGATCAATTCGCAACCGAATGGTTTGTCGAGCTTGAATGAAACGGATTTGAATGCCGAATTGCATATGGACAACAATGATGGTGCCAATGATTTAAATCTTCTTCCCGATGTTGATCCCATGGAAATTCTCTCCTACTTGGACCCGCAACCCGATCTAAATACTCCACCATCAAGCGGTtccagcaataacaacaacaatgatgATATATTATCAACGCTATTCGATTGA
- Protein Sequence
- MNAGSGSSRAPASGSQISPQLPDVQTQQQQQQQQQQQQPQQQQHQQQQHLQQQQQHHLQQQQHTAQQNNSYGNPNYPNVYTNSSSNTSAHSQQQNGLTSMGGYSMGEPDSLRTLKNTFGPNSEFTATAGYGSYSNMVTANGGAMQQQQQQQQMDNMSGMGSGYGQMGANQMHGGNVQNLYMNGNIGTNGSGSPSTANMNSAGGPQVGGGNPGMGMNSAANMQMGHMSAYNGVGPNGSPGMGPSRHQMNPMSQMQSMTMGGGVGGSQLTPQQQQQAMSSGLGPMAKMQGMANGGYPRRSAPYPNPQMHAVQKRAGYTSMGNPAALQNVPPQMGGMQHYGQQMHPQAGSGVPVPMQASAYGRGSPMGGYGRANGMGPMGMGPGGGMGHGGGMGPGGGMGPGGGMCPSNMVPGGGMGPGGMGPGSMGPSGMSAMQRGMPQGGPGGYGAAMAHQPSQYYPGMNGGGGVGAGGGGGMGPAGPGAMSNTGAMYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYISPNPDIKPIMDNCEEMRLTFPVRDGIILPPFRLLHNLSVSNHVFHLKQNVYNTLMCRSDLELQLKCFHQDDRQMNTNWPHTVTVSANATPLTIERSEKTGQALRPLYLKAVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVRHVLQSLHKRNCLPVDHCVAKIKRNFMVCSTTSVPLEAGGAANMDQATKCTKISLKCPIMKSRIRMPARGHECKHIQCFDLEAYLLMNCERGAWRCPECNKPALTESLEIDQYIWAILDKLSGTDVDEVIIDSSGNWRAAQGMHQGSPLNSMSAQVPNPMSAQMIGQGPGQMPGQMGGGSQGPAQMGGPAHGPMPGQMGAQSANQMGPMGGSQMPGQMSSQMGPMGGGGPMNSQMPGQMVGQMGGPMGGGGPNVASIKQENTFDDQSKVMSPWDNSQAMSPYMQQHDMNAGTPNVPGAGQIRSPFDMYGGASDVGVNDQHTGDTGNSLDQLNAMEKSLTDQMPHTPHTPMHPMTPGGPPSVSSAHNEPSTPNANISNASPQTPGTPGGPPSNRANANETHQQQQQSVQQSQQEQIINSLINSQPNGLSSLNETDLNAELHMDNNDGANDLNLLPDVDPMEILSYLDPQPDLNTPPSSGSSNNNNNDDILSTLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00083582;
- 90% Identity
- -
- 80% Identity
- -