Ucar038568.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- Gata4
- Assembly
- GCA_960531455.1
- Location
- OY482674.1:122176254-122183543[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 1e+04 -2.5 0.9 22 26 383 387 381 388 0.79 2 2 3.2e-16 2.5e-12 47.5 2.4 1 35 1216 1249 1216 1250 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATGTACCACCTAAGTTCTTTCAAATTTGTCGTTTATGCCTTACTTTGGTCAAAGAGCATGACGTTGAGGTGTTGCAAATATTTAattcatcaacatcatcatcatcgtcagcAGCTACGGTCCCAATACCAACAACTGCTACTGCGACAGCTACCCCAACCGTACCATCTGCGACAACATTGCTGCCATTTGGTGGTGGTGGTTGCGGCGCTGAAAATTATCAAACATGCGATGAGGCTACTACAAATACTGGCCACACAAGCCATCACCTACAACATTTACTACAGCAAactcatcatcatcaacatcaacatcatcaACGTCCCACACATCAGCATTTTGGCGGGGGGTCACAAAGCAGCAGTACGAAAAAAGATGATTACAGAACGTCTGATGATAAATCCAATCAATCCCCATCCCCCCTGGTAGCTCGTGTTTTTAAGAGTGAAAGAGAcgaacaagaacaacaacaagagcaagaAGCAATAGCAGTAGCAGAGATGCCAGATAGTAGATTAAGAAGTACACCAACAACTACACTTGTGCCGATTGTGCCTTCAAATGTTCCCGCAGCTGCAGCTAATAATACATTAACTGATACGATTTCATCGAATACGAGCACATATGGCGTCAGCCAAATGTTATTGTTGTCTAAAGCATTGGAAGGAAATACAACAAATAACAATGTGGGGGGCTTTGTCGTCGCAACTTCTACAAAAAATACTCATCCGCAAATACAATTAGAAAATGTCGTCACACATGGGAAACGACAAAAGATTACATTATTGTCTAATGATAACGACGACGCTGGCGTCGATCACAACGacaaacacaaacacaagcAACACAACCACAACGACAACGCCACCAACATCGTAGGCAGCAAAAGTAATCAGCAAGTAGAAGGCGAAGTCGAAATCGAAGGCGAAGGCATGCTTGTTGTGGATGAGAAGATGGAAGTGGAGGAGATGGAGGCGGAGGTTGTGAGCGAGAAGCAAGGACGGGGAGACGATAAGTTGATGGTTTTTAAGCAGAAGCACGAAGAAAACCATGATGAATCATCAGCACCACACATTACCATACAAATACTCAGCTGTCTCTCTATAAAGATTTCACCAGATGATGGCCTGCCAGCAATTGTTTGCAACAACTGCAGAAGACAATTGAATGCATTTTGGAACTTTCGATTGATGGCTCAAAAAGCAGATTATACATTGAAAGAATTAACGAAATTTTCTAAACAGCAAACTTCTCCTGAGCCCAGCACACATCATTTTGCCAACATTTCACCCTCGCCGCCTTTCGGCCAATCCTCATCGGAGCGTATGGCAGCAAAAGCTTTAACCGAATTAAGTAAATCAACGAAAAGTTATTTTGGCAATTATAATAAGCCCATGCTAATCTCAACTGCCGCCGATAAAgcacaacaagaacaacaacatcaacaacaaaaatcgAATATTAACGCTGCTAATTATGAAAATGaagatgatgacgatgatgatgatgatatttATAATCCATCGGCATCCTGTTCAACAAAATCGCATTCGCCCATAGTGAGAAAGCATATGACAGTGCAGTTGCCGCCATTGGGACCGCAGCCGCCGCCACAGCCGCTACCGTCGTCACAGCAGCAGCCGAATATTGTAATGGGCGCAACAACAACTCCAACTCCAACTCCAATAGCAACAACAGCCGCAGTAATAACCCAACCAACAATAGCAACATTAGCCAGGCCGGCAACAGCTGCAATGCCAATACTCATGCCGATGCACATTAATAgccagcaacaacagcaacaacaacaactacaacaccAACAGCAAATGGATGCAAAGCTTTTGGAAAGTCGTCACGTGGATGGCAGAGCGTTATATTTTACGCCACCAAATGATGCAAATCAACAGCTCAACTACGATGGTCTCATATCGCCCACAACGATTgtgaaaaatttaataaatatgaaaaatgaaaatttaccGAATATTGAAAAAATCAGGAATCTCCAACAAAAACTCGAAACGGCTGCTGTGCTAATGGATATAAGTAAGAAGGTGATTATATCGCCGCCATGCTCGAATCGGCAATCGCCAAATTTGGCAGCAATGCAATTGCCacaaacgacaacaacaacaataacaaaaactgcaacaacaccagcagcgGAAGCAACAGCGCCAGCAGCAGCAACAGATGAAAGTATTAAAAATTCTGTGATAATTAAAACTGAACGTCCATCAAATGAATTAAATTTAACTGTAAATGCTATAGCTAAAGCTGCAGCTATAGttaacacaacaacaacaacaacaacatcaacacaacagcaacaaattcagctacaacagcaacaacaaatacagttacaacagcaacaaatacagctacaacaacaacaacaacaacaacaacaaatacagcTACAACAGCAACAGCCGCACCAACATCACTCACAGCAACATcaagaacaacaacagcaacagccaCAAGATGGCAAGGAAATAGATTTATCAATTAAAAAGCCGAAACCAGAATTCTCAGTGAACGCAACAcaacaattacaacaacaacaaagtacAACTGTAGTAgctgcagcaacaacaacaaccacagcaACAAATGTATCTCAATTATTAAACTATGCTCGACCTGCAACAATACTCGAattacaacagcaacaacaacaacgtcaaCAACTTCAACACcaagagcaacaacaacagcaacaacaacaacttctacaccaacaacagcaaattCAACGCCCAcaccaccaccaacaacaacaacaacaacaccaacaacatatTATACAACCTGTAAATTTAGATTTAGAAACAACAACAAGTATTATTAAGGGAATCAACAAAGGTGAATGTATTGAGAGGGATGCTGGAAGTAGACCTTCTAGTAGCAatctaacaacaacaacatcaattaGGCCTACAACTAATCAATTAACACAACAACTAACAATACCAAATAAAACGGATttaacagcaacagcaacaactgCAACCACATCCTCAGCTGTTTACAGCGATTCGGAAGATAGTTCGGATTCGAATCGTTTGGAAATGGATATGAGCTCAATGTATGTGAATGAGCGTAAAACACCAGATAGTATAACATCAGAGGAGCAAGTAACGGATATAGCGACCACACAATTGTGGCAGGCGCTTGCTAGATCAGCTGCAAATAATGAAAACAATCAGTTACTACGGCATATGATACAACGTTCGCTTGTATTTCCGCCTGCACCGCCTGCTGCAGCAATGGCTGCGGCCGCCGCCGCTTCCGCTGAGAATGTACCTGAACAGCCGATGGCGTTATTGAAGAACGATAATTTGAATAAATTTGGTCGCCGTAAACAAACTTGCCCCACAAAAAATGATGCACCCTTTGAACAATTGCCAAATTGTATGGCTGTTAATGCGGCGCAAAATCTCGAAATGAATGCCAGCAATACTAGCAATCATGTTGCCGTTGCTGCagctgcagcagcagcagccgcTGCCGCCAGCATGCACCAGGATAAAAACcACAACAAAAATTCTAGCAGTTCAGCTACAGCAAGCGGCAGCACCAGTAGTAGTGCCAGCGGTGGCATAATCAACAATCCAAAAGATATGTCCTGCTCAAATTGTGGCACTTTAACCACAACCATTTGGCGGCGCAGCATACGTGGTGAGATGGTGTGCAATGCTTGTGGTTTATATTTCAAATTGCATGGCGTTAATCGGCCGCATTCGATGCGTCGCGATACGATACATACACGACGGCGGCGTCCGAAGGAATgtgaaaaatcgaaaaagaAAAACAAGCATCGCGCAAGCTCACCTGGCGATGGCTTATGCAAAATGCCACCCGTTGCCGCCGGCACAACAACAGATACAAcaggtggtggtggtggtggtgtggTGAGCGGCGGCGCAGGTGTTGAGCTCAAACAAAATGTGTTCTTAGCGGTTGATAATCCAGAGACATCTGTTTTTTCGTTTGCGaaatACAAGCGTCACATAGATGAGGAGCAAGCAAAATTGATCAAAGAGGGTTTATTAAAGAAAAGGAAACTGCAGCAAGGTATGATTAATAAAGGTGGTGAATTCAGCCAAGTGGATGATTTCTTAGTGCCACTGAATCTTGTTTCCAGTGAAAATAATACTAAGTTAACATAA
- Protein Sequence
- MCNVPPKFFQICRLCLTLVKEHDVEVLQIFNSSTSSSSSAATVPIPTTATATATPTVPSATTLLPFGGGGCGAENYQTCDEATTNTGHTSHHLQHLLQQTHHHQHQHHQRPTHQHFGGGSQSSSTKKDDYRTSDDKSNQSPSPLVARVFKSERDEQEQQQEQEAIAVAEMPDSRLRSTPTTTLVPIVPSNVPAAAANNTLTDTISSNTSTYGVSQMLLLSKALEGNTTNNNVGGFVVATSTKNTHPQIQLENVVTHGKRQKITLLSNDNDDAGVDHNDKHKHKQHNHNDNATNIVGSKSNQQVEGEVEIEGEGMLVVDEKMEVEEMEAEVVSEKQGRGDDKLMVFKQKHEENHDESSAPHITIQILSCLSIKISPDDGLPAIVCNNCRRQLNAFWNFRLMAQKADYTLKELTKFSKQQTSPEPSTHHFANISPSPPFGQSSSERMAAKALTELSKSTKSYFGNYNKPMLISTAADKAQQEQQHQQQKSNINAANYENEDDDDDDDDIYNPSASCSTKSHSPIVRKHMTVQLPPLGPQPPPQPLPSSQQQPNIVMGATTTPTPTPIATTAAVITQPTIATLARPATAAMPILMPMHINSQQQQQQQQLQHQQQMDAKLLESRHVDGRALYFTPPNDANQQLNYDGLISPTTIVKNLINMKNENLPNIEKIRNLQQKLETAAVLMDISKKVIISPPCSNRQSPNLAAMQLPQTTTTTITKTATTPAAEATAPAAATDESIKNSVIIKTERPSNELNLTVNAIAKAAAIVNTTTTTTTSTQQQQIQLQQQQQIQLQQQQIQLQQQQQQQQQIQLQQQQPHQHHSQQHQEQQQQQPQDGKEIDLSIKKPKPEFSVNATQQLQQQQSTTVVAAATTTTTATNVSQLLNYARPATILELQQQQQQRQQLQHQEQQQQQQQQLLHQQQQIQRPHHHQQQQQQHQQHIIQPVNLDLETTTSIIKGINKGECIERDAGSRPSSSNLTTTTSIRPTTNQLTQQLTIPNKTDLTATATTATTSSAVYSDSEDSSDSNRLEMDMSSMYVNERKTPDSITSEEQVTDIATTQLWQALARSAANNENNQLLRHMIQRSLVFPPAPPAAAMAAAAAASAENVPEQPMALLKNDNLNKFGRRKQTCPTKNDAPFEQLPNCMAVNAAQNLEMNASNTSNHVAVAAAAAAAAAAASMHQDKNHNKNSSSSATASGSTSSSASGGIINNPKDMSCSNCGTLTTTIWRRSIRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKKNKHRASSPGDGLCKMPPVAAGTTTDTTGGGGGGVVSGGAGVELKQNVFLAVDNPETSVFSFAKYKRHIDEEQAKLIKEGLLKKRKLQQGMINKGGEFSQVDDFLVPLNLVSSENNTKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -