Ucar022783.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- pnr
- Assembly
- GCA_960531455.1
- Location
- OY482672.1:109854930-109855861[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 8.5e+02 1.0 0.1 1 5 29 33 29 40 0.81 2 2 4.7e-18 3.7e-14 53.4 9.2 1 35 81 114 81 115 0.97
Sequence Information
- Coding Sequence
- ATGACTACAACGCATTGGCCAAGTTCGGGATCAATAACCGCTTACGATACATCACTGGGTTCAACGATCTACGAAACGCCAAAATGTGAGAACTGTGGCGCACCTTACATACGCAAAGGCAACGATTTCTATTGCTCGACGGGTTGTAATCAGCTGCGGCCGACGCACGTTCGCCTATCAGCGCGTCAGTCTAAGCCAAAAGTTCCCGCTAATGCCAACAACAGACGTACAGGGGTAACATGCGCCAATTGTAATACAAATACAACAACACTGTGGCGGCGCAACAACGAAGGGAACCCTGTGTGTAATGCTTGCGGCTTATATTTCAAGCTGCATAATACAAACCGGCCGCAATCGATGAAGAAGGATGGTATACAGAAGCGAAAACGCAAGCCAAAAAATAATGGCGGTATGACTTCCATGAAAGCACTACCATCTCTCCCAGGTATGCCACAGAATATGACGCTAATGACACAAAATGGTACAATTTATCCATCTCAAGTATCCACATTAAATTTGCCAATGAGTAGTGGCAGTGGCAGCAGCGTTATAAACGCCCAATCAATGTCGAGTGAAATGCATGATATGTCTATGAATGCTGGAATCACTGCCGGTGCAGGCACGGGTGCAGGTGGTGTTGTTGGTACTGTGGTAGTTTCTAGTAGCGCTGCCAGCTCAGTTGCAAACTCTGCATCACGAAACGTATCTATAACTAATCATGTTACGGGCGATAGTCATTCGCCTTACAGCAATTCACCATCACAAAGTCATTCGCCACATTTAGCGAATCCGTCTCCACTTAGCAGGCAACAAATAACTCAGAAGTAA
- Protein Sequence
- MTTTHWPSSGSITAYDTSLGSTIYETPKCENCGAPYIRKGNDFYCSTGCNQLRPTHVRLSARQSKPKVPANANNRRTGVTCANCNTNTTTLWRRNNEGNPVCNACGLYFKLHNTNRPQSMKKDGIQKRKRKPKNNGGMTSMKALPSLPGMPQNMTLMTQNGTIYPSQVSTLNLPMSSGSGSSVINAQSMSSEMHDMSMNAGITAGAGTGAGGVVGTVVVSSSAASSVANSASRNVSITNHVTGDSHSPYSNSPSQSHSPHLANPSPLSRQQITQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -