Ucar022777.2
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- pnr
- Assembly
- GCA_960531455.1
- Location
- OY482672.1:109505728-109507644[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-18 3.7e-14 53.4 3.2 1 34 111 143 111 145 0.97 2 2 7.2e-19 5.6e-15 56.0 6.2 1 35 168 201 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTATCACTCCAGCGCTGGCTACCCAGATCTAGCGGGCGGAGTCACTGGTAACGGCGGATATCATCATCAACAAGCTATCAACGCACCCGTCTATGTGCCCTCCAACCGAGCACTCACCCAAAGTCAATACAACCATGTAGCCGCACATTTTGGCACTGCTGCTGCACAAAATGCCTGGACCACAGACAGTTTTGGTACGGCACACGCTCAATTGCCAACGCAATTTTATACGATGGGTTCCTGGCGTGCAGCTTATGACCCCGCTGGTTATCAACGTTCCTCCCCATATGAAAGTGCAATCGATTTCCAGTTTGGCGAGGGACGTGAGTGTGTCAATTGTGGCGCGATCAGTACGCCATTATGGCGGCGTGATGGCACCGGTCATTATTTGTGCAACGCATGTGGTCTGTATCACAAAATGAATGGTATGAATCGGCCACTCATCAAGCCGAGCAAGCGATTGGTGAGTATAACGGCAACAAGGCGGCTTGGATTGTGCTGCACCAATTGTGGTACGCGCACAACAACGCTTTGGCGTCGCAATAATGAGGGTGAACCGGTTTGCAATGCCTGCGGATTGTATTTCAAGCTGCATGGCGTAAATCGGCCGCTAGCGATGCGAAAAGATGGCATACAGACGCGGAAGCGGAAACCGAAAAAAGCGAATGGCTCATCCGACGTTTCAAAAGATGGCAAAGACGAGGATTTGAAACCCTCGCTTAGCTTGCAACGCCGTAATTTATCTTCATCTGTCGCGATATCTACCAAACTACAATCGGATATGAATTTAAGGGCCGGTAGCACTTTTAATCATACACTTTCCAGCATCAGCAGTGGTGGTAGTGCTAACATCAGCCATAATAATTCCTTGCATAACATCGGCTTGGGTACCACAAGCTCCTCGCCATCCCCTGGTGGTGCGTTACAAAATTCCATACATCATATTCACTTATCATCAACAAGTTCGCAACAGCCCCGCCACTCAGCTATTTCCATTCACCCACACCCCCACACACATACGCATGCGCATTCACCAATCAGTGGTGGTGGATGTACATCCACAGTGCACTCAGTAACAACTGCTTCGCCTACCAACTCCAATATATATTCCCCACAATCAGGTAATGCATATAGCGCCCATCATTCCGCATCAACTTACAGTAGCTCACATAATATCTCCAAATATGAACACCTGTTAGGTTCAAGCGGTAATGAGGGTGGTGGTGTCGACTGCAGTAATGGAGGCAGCGCTGCTAACAGTACCAATATATCTTCTGTTAACACTGTCTCACTCCCTACCGAAGTGTCGGCCGGCACGCCCAGTCCCAATTATAATCATTCCGGTACGTCAGCTAACCATCTACATCATCACAATCATCATCATAATACGGCCTTGACAGCGGCACACCATCTGACCTCCTATCATGCATCCAGTGCATTGAGTCAACATGATACGGGAGATAACGGTAGTGGTGTTGGTTATAGTGTTAAGTCGGAAATGAATGCCAGCAACTATGATTACGTGGGTAACTGCTACTTTGGTAGTTCCTTTCCGCCACTAAGCGCTTCCTCGGCATCGACAGCTGCTGGCACTGGAATGGGCATGAATATTGGGGTGGGGGTTGGTGTGGGTATGGGTGTTGGAATGCGTGGCATGCATGGTTCAGCCGGCGAATTGGCCGGGTATCACCACCAACACAATGCCATTCAGGCGGCTAAACTGATGGCCACTTCGTAA
- Protein Sequence
- MYHSSAGYPDLAGGVTGNGGYHHQQAINAPVYVPSNRALTQSQYNHVAAHFGTAAAQNAWTTDSFGTAHAQLPTQFYTMGSWRAAYDPAGYQRSSPYESAIDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSITATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKANGSSDVSKDGKDEDLKPSLSLQRRNLSSSVAISTKLQSDMNLRAGSTFNHTLSSISSGGSANISHNNSLHNIGLGTTSSSPSPGGALQNSIHHIHLSSTSSQQPRHSAISIHPHPHTHTHAHSPISGGGCTSTVHSVTTASPTNSNIYSPQSGNAYSAHHSASTYSSSHNISKYEHLLGSSGNEGGGVDCSNGGSAANSTNISSVNTVSLPTEVSAGTPSPNYNHSGTSANHLHHHNHHHNTALTAAHHLTSYHASSALSQHDTGDNGSGVGYSVKSEMNASNYDYVGNCYFGSSFPPLSASSASTAAGTGMGMNIGVGVGVGMGVGMRGMHGSAGELAGYHHQHNAIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -