Basic Information

Insect: Urophora cardui
Gene Symbol: hang_1
Assembly: GCA_960531455.1
Location: OY482671.1:134337328-134370208[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.09 12 7.9 1.3 3 23 514 535 513 535 0.93

2 20 0.047 6.3 8.8 3.4 3 22 641 660 639 660 0.90

3 20 0.017 2.3 10.2 1.3 1 22 735 756 735 758 0.90

4 20 0.63 84 5.3 1.0 2 21 770 789 769 790 0.94

5 20 5 6.7e+02 2.4 1.6 2 23 798 820 797 820 0.88

6 20 0.0037 0.49 12.3 0.2 3 23 892 913 891 913 0.96

7 20 8.9e-05 0.012 17.4 0.1 1 23 921 944 921 944 0.96

8 20 0.00022 0.029 16.2 0.1 2 23 1038 1059 1037 1059 0.97

9 20 0.24 32 6.6 3.2 2 23 1125 1147 1124 1147 0.94

10 20 0.0062 0.82 11.6 0.2 2 23 1156 1178 1155 1178 0.95

11 20 0.00056 0.074 14.9 0.1 1 23 1191 1214 1191 1214 0.97

12 20 0.00019 0.025 16.3 1.1 1 23 1289 1311 1289 1311 0.99

13 20 0.003 0.39 12.6 0.9 1 23 1319 1342 1319 1342 0.96

14 20 0.026 3.5 9.6 0.2 2 20 1350 1368 1349 1368 0.95

15 20 6.2e-05 0.0082 17.9 0.6 3 23 1447 1467 1446 1467 0.98

16 20 7.9e-05 0.01 17.5 0.7 1 23 1502 1524 1502 1524 0.97

17 20 0.0002 0.027 16.3 0.5 2 23 1590 1612 1589 1612 0.92

18 20 1.2 1.6e+02 4.3 0.3 2 19 1632 1649 1631 1651 0.92

19 20 0.027 3.6 9.6 0.2 3 23 1667 1687 1667 1687 0.98

20 20 0.00075 0.099 14.5 1.4 1 23 2007 2029 2007 2029 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.09	12	7.9	1.3	3	23	514	535	513	535	0.93
2	20	0.047	6.3	8.8	3.4	3	22	641	660	639	660	0.90
3	20	0.017	2.3	10.2	1.3	1	22	735	756	735	758	0.90
4	20	0.63	84	5.3	1.0	2	21	770	789	769	790	0.94
5	20	5	6.7e+02	2.4	1.6	2	23	798	820	797	820	0.88
6	20	0.0037	0.49	12.3	0.2	3	23	892	913	891	913	0.96
7	20	8.9e-05	0.012	17.4	0.1	1	23	921	944	921	944	0.96
8	20	0.00022	0.029	16.2	0.1	2	23	1038	1059	1037	1059	0.97
9	20	0.24	32	6.6	3.2	2	23	1125	1147	1124	1147	0.94
10	20	0.0062	0.82	11.6	0.2	2	23	1156	1178	1155	1178	0.95
11	20	0.00056	0.074	14.9	0.1	1	23	1191	1214	1191	1214	0.97
12	20	0.00019	0.025	16.3	1.1	1	23	1289	1311	1289	1311	0.99
13	20	0.003	0.39	12.6	0.9	1	23	1319	1342	1319	1342	0.96
14	20	0.026	3.5	9.6	0.2	2	20	1350	1368	1349	1368	0.95
15	20	6.2e-05	0.0082	17.9	0.6	3	23	1447	1467	1446	1467	0.98
16	20	7.9e-05	0.01	17.5	0.7	1	23	1502	1524	1502	1524	0.97
17	20	0.0002	0.027	16.3	0.5	2	23	1590	1612	1589	1612	0.92
18	20	1.2	1.6e+02	4.3	0.3	2	19	1632	1649	1631	1651	0.92
19	20	0.027	3.6	9.6	0.2	3	23	1667	1687	1667	1687	0.98
20	20	0.00075	0.099	14.5	1.4	1	23	2007	2029	2007	2029	0.98

Sequence Information

Coding Sequence: ATGTCGGATGGCAGCCCATTGCGTTCGCGACAAAATTGCTGTCGCCTCTGCTTAGCTCCAGGCAGTGAATGTATATCGATATTGAATAGCTATGCGGCGGATAAGGAACCTTTGGCTAGCAAAATACAAAACTGCGTCAGCATTAAGATAAATCCCGATGATCAGCTATCGCTGCGTATTTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGCTTCAAGAATCGTTGCGTTGCCTCGCAAGCGAAACAGCGCAGTTGGTTGGAGGCCAATAAATGTCAAACATTACTTGACAACAATGTTAGCATATCAACGATTAGTGCCGATGGCAAAACGCAACCACACCAGCAAATGGAGGGAAGCGACCAGCAGCAACCAACATCGAATTTGGCATCATCGATTTTGGATGGAATAACATCATTGAAGAAACGAAAATCTTTAACCGTTTATGTGAGTCCTAAAGAAAAATCCCAAAGTACCACTACTACTCCTACTATTACTACCATTCCTACTACTAcaactactactactactaccaCTACTATTATTGCTAATGTTCCTACCACCATCACTAACACCACACCTACTAATATGGGTGGCGAGCAATTAATAGTAGCGACGGCATCGGCAAGTTTTCACGAAATAAAATCTcaagagcaacaacaacaaaaccaatTACTCTTGCAACTGCAACAGCAACAATCACAACAACTGTCACATAAGAGATATAGCAGGCAATTTTCGCCTGTTTGCAATTTAGCTGGTGCTGCTGTAGCTGCCGCAGCGTCACAATCGCAATCGCAGGCACCAACCGTAGCGCAACAATCGCCGCAGCCGAAATGGCGTCGCGCTAGACCATACCATCGCaggcagcaacagcaacagcaacaccaGCACCGTCAGCAGCAGCAAAAGGAGTTGCAACAACATGTACAAGCTGAAGTGGAAAAATATCAGAGGCAACAATTGTTGTTGGAGCAACAAAAGTTGTTggaacagcaacagcaacagcagcaacaactgCTATTGCAACAGCAAGAgctgcaacaaaaacaacaacaacagcaattgcaaacacaacaacaccAGTTGCAACAGCAGCAATTGCCGCAAATGTCACTGCAACAGCAAGAATTACTACTACAACAACagctacagcaacaacaacaacaacaacaacaaacaagtGCTGTTGCTGCAGCATCCACTGCTTCTAGCAGTGCATCGTGTCAAAGTGCCGCACAGCAATTGCGTTTATTTAGACGTTACACGTATAATAACCCATTGCCCGCAGTGGATATCAAAGACGAACCAATCGATCCCGATGATGAATACAGCGGCAAGCCGCATGATGAATCCGATGATATGGTTGATCCTACGCTCTTCTTGGAGCGCACCGAAGAGGAGGGCGATGAGGCGTTAAtgGAACACATGTCGTACCAGTATGAGCCGCCGCTGCCGCCGCAGCCGCAACCACAACCACCGCCACGCCCTGCTTTCGAATTATCAGCGCTGGCTGACACCAAGGAAGCATCGTGTCGTGCATGCAATCTGAAATTTTCTACACGCGCCAATGCGCGTCGCCACGAGCGCAACTTACATCCAAACCTATTCGAATTGTCCACATCAACACCGAACAATATGCCCGTTACGAAACCAACGCCAGCGCTGGCTGCCGCTTTGGAACTGCAACGTGCCTCAGCAGCTGCCGTGGCAGCCGCAGAAGCATCGAAGGCAGCCAGCGGTATGATTACACCGCTCAAGTATCGGCAGGAAATTGTGAATGCTTTCAACAAATGCGACGTTAGCGGCTTTGACTACGAGCATCCGGAGAAATATCAACACTTTTTGACCGATGAGAAGATTGTCTTTCTACAACAGAACGATGAATTTTTGCGTCAATATCAGAATATGACTTGCCGTTGTTGTAATAAATCATATTCAACGTACAAGAATTTCATGGCGCACATGCGCAAGAAGTACTTAACGCTGCCGCGTAATCTCTGCTTCAACTGTCTCAAGCTAAACGATTCGAAGGCGCTATTTATATCGCATTTGAAGCGGCGCAATTGTATCAATTTGTATAAGGTTTTACATGCCCTAATGGCCAAAGATCCAAACTTTGCTGCAGCGGTGACGGCAACGGCGGCGGCCGTACCCGATAAATTGCGTGCCAAAGAATTGCTCGTCAATAAAATGTACGAATGTAAATTGTGTCCGAAGAAGTTCCGTTTGAAATTGGAATTTCGTTCGCACGTTTACGATGACCATGCCGAAATGCAGCGAAAGGATACAATGCAAAAACAATGTTGCTTTTGTGGTTTGGAATTTGAGGATGCGGCCGAACGTAAACGGCATTATAATAATATGGATTGCATTGTCTCATTGCGTTGTGTTACATGCGATGCGAAATTTGACAATCATCAGAAATTCTTAGATCATGTCTATGAGAAGCATTTGAGTGGTTTTGGCGAACAAGTGGCAATGGTGGCGCATAATGTGAGTGCAGCGAGCATGGACAATTCGCCGGGCAAGAAGTCAACGCCAGGTTTGGGTGGTGCATCATCTACAGACGAATCTCGCAGCAGTCACCAAGCCAACACCTCCGCAGCCAACACCTCCACTTTGTCACAGCCAAAATCGCAATATTTCTCTCGTATGCCACAAGCTTGTCCGATTTGTGATCAACAATACAATAACTACAACAACGTATTACGTCACATGGAATCCAAACATCCCGATCAATTGCCACAAACCTATAAATGCGTTAAATGTGGCATCGGCTATCCACGTTTATCGAATTTGCGCGAACATATGGTTAGTGCACATGCGGCCGATAAGGCACGTCACACGGGCTTTGAATATATTGTAAATGCTGATGCCGTTAAGATCGCCCATGGCAATCCGCAGAATATCTATACGGGACGTTATGACTATGTAATGAAGGACTTGATGTCGATAACGAATGGCAGTTCAGCTGCCGACGATGATGAAAATTCCATTGAGAATGCCACAAAGAAAATGCGCACAGATAGTGGTGCCGCTGTGTCTACAAGCGCGGGCGGCAACAATGCCAGCGGCAGTGGCAACAGCTTCAGCAGTATGAAGGAGTGTCCCATATGCAATGCCGTGTTTGGCAATAATATTGGCCTTTCCAATCATATGCGCTCGCATAGCGCAGCCGCTCAGAGTAGCGGTCTCTCGCTAGCTGCCCTACACTCCACCAAATCAGCACCCAGCGGTCTTAGCATAACAACAGCGTCCAAGTCAGCGGCACCAGCAACAGCTATGCAACAGCAGAGCGATATACAAAAGGCGATATTCAAACGTAGCCTCGAACAGGCAGCCGATCGTCGTTTTCGCCGCATGCGTTGTCGCCTTTGTCAGCGTCGCTTCTCTTCAAAGAAATCCTATCGTTTCCACATGCTCAACGATCATCAAATACGCAATGTACAATTTATTAAATGCAAATTGTGTGATGCCGAATTTGCCTATGAGAAGGGTCTGAAGGTGCACATGTTCAAAATACACAATACGCTGCTCAAGGATGAGATGATTGTCAAGCAATTTGAGTGTGATATTTGTTCGATTGTGTATCGTAGTGAGGATCAGCTGAATCAACATAAAGCGACTGTGCATGGCAATGCTGCAACGGGCGCACAACAACAAGACGATGGGGAGGCTGCAGCAATGCCAACAACATCGCACGATGCTGAGGCGAGCAGCGCTACAAATCCAGCAGATCGCTCGGGTATATCGACGCCGGCTAGCAGTGTTGGGGGTGCTGGTGGTGGTGCTGGTGCTGGTGCTGCTGAGCGCAGCTTGTTAGATACGTCAGCCACCAGTGGGCCATTGTATTGGTATCAATGCAAATATTGTCCATCTAACTTTAATACAAACAAAAAGTTAGCTATTCACATCAATTCACATGATGAATTCGATTCAAATGATTATTCGTGCAAAGATTGCGGCAACGTGTACAGCGGACGTAAGAGTTTGTGGGTTCATCGCTACAAAAAGCATCCACAATTCCCGGAACCCTCCGAGTGTGTACTCTGCAAGAAGGTTTTCTTCGATAGTCAAATGTTGCAGAATCATATACCCACTTGCAATCGCAAACCGATAAACACAGTTACTGGTGCCGTCGCCGACAGCAACGCACCACCACCAATTTACAAGCATAAAACCGGCGACGACGAGGATGATGAAGCTTCGCGCGAAGCCGCCGCCAACACCAGCGGTGTGATAACGACAAATGCACTAGGCGGTGGCGAACTTGAGATAACGCCAATACCGCCGGCTGGTTCGCTAAAAATCAAATTACCCGAAGTCGCTTGCACCATGTGCGGACAGCGTTTCACCGACCAAGAGCTATTTTCGAAACACATACAAATGCACGAAATGGAATTGTATACAGATAATCCATTGGCGGCAATGTTTGATACTGGGCCGGCGGATCCGAATCAGTTCTATTTGGATCGGGTGAATGATAATGGCGAATACGCTTGCGATTTGTGTAATAAAACATTTACACAAATGACAGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGCCGACATGGATCAATCGAGCAGCAATACAGCCACGAACCAAACATCGTCACAGATCCAGACCAACCATCTACATCCACTGGGATTACAAGCGGTGGGTCTTATGCCCAATCCacatcatcatcagcatcacAACCTTTCAAAATCCCAGAAACGCAAACGCGAACTTAAATGTGAATATTGTCCTTCCACCTTCATCAGCAACAACAATCTGCGACGCCATATTTACGAGCTACACAAAGATGAGATTGGAAATTTGCCTGTGCCACCAAAAATCGAAACTGATCCACATTTGCAATGCCGTCGCTGTAATCTAAAATTCCCAACGAAATTCGATTGGATCGAGCATAAGGTTGGTGACGCGCGTGTCACCAAACCATTTGGACCATTCCAGTGGGGTTGTGATTTGTGTGGGGCTTATGTTTCGCGTAAAGAGAAATTGATAAATCATATAAACAATCATTTGAAGGAGAGGGAAATTGTGCCGGTGGATGAACAGCCGCAGCAACAGACGAATTCGGCAACTGTAGTAGGGGCGCCATCTAAAGCGGCGGCGGCGCCAGAAACGGCGACAACAGGAACGGTAGAAGCTACAGGAATAACTACAACCACTACGACGACGGAGGAAGTTGCTGCTGATGATGGAGAATTCAAGGTGAAGGTGAAAAAAGAGAGGTTGGATGAAGATGAGGTGGAGGAGGCGGAGGCGGAGGTGGAGCTGAGGTCGCAGTCAATGGCAGATGGCATTAAAGCCGAAGAAGAATCTGAAGATTATGGAGCTGCTGACGAAAGGAACGAAGCGGCAGAGGAGGAAGCGGCGCAAAATAGAACGATTGCGACACGAATGCGCCAAAATGCCGAACAAGATGATAATGAATCAGATGATGATGATGTCGaagacgatgatgatgatgatgatgatgaggacGATTTTGAAGAAGTTGGCGATATGATGAAAGCCCATAAGACGGAGCGTGCCACAGAAAGAGCGCAAAAGGACGAGGATTATGAAGATGCAGATGCCGACGCCGATGCCGATGCCGATGACGATGATGTTGATGAAGACGCCGACGACGATGATGATGTCGACGATGAAGATGGTGGTGGTGCTGATAGCGATAATGCGGCATCATCCCAACAGCGCATGGCTGCAGCGAATGGCCGTGCTGCTTATGGCGAACGTCCGAAACACCCGCCATCGTCTAAGGTGGCAGTGGCGGTTGCGGTGACGCCAACGCAACCAATACGAAATTCAACAGACACCAGCGAAGACACTTCGTTGGGTGAGGAGGACGATGAAGACGACGACGCTGAGGGGGACGGGGACGTTGATGATTCCGATGTTGACAGCGATGCAGATAGCGATGATAGCTCATCGCAAGCGTCGAAAGATCCAGCAGCACCGCCGCCCAGAGCGCGCTTCTCTTGTGATCTATGCCGGCTATTCTTTGATACACAACAAGAACTGCAAAAGCATGTGAAAATGCATTTCCTTAATGGGCCCGGTTCGGTTTCGCTAACTGAAATCAAGCCAAAGGCAAGCAGTAAGTCCAGCCGCAGCAGCAGCAGTGATGTAGTGGCGGTGTAG
Protein Sequence: MSDGSPLRSRQNCCRLCLAPGSECISILNSYAADKEPLASKIQNCVSIKINPDDQLSLRICHACISYLNSWQSFKNRCVASQAKQRSWLEANKCQTLLDNNVSISTISADGKTQPHQQMEGSDQQQPTSNLASSILDGITSLKKRKSLTVYVSPKEKSQSTTTTPTITTIPTTTTTTTTTTTIIANVPTTITNTTPTNMGGEQLIVATASASFHEIKSQEQQQQNQLLLQLQQQQSQQLSHKRYSRQFSPVCNLAGAAVAAAASQSQSQAPTVAQQSPQPKWRRARPYHRRQQQQQQHQHRQQQQKELQQHVQAEVEKYQRQQLLLEQQKLLEQQQQQQQQLLLQQQELQQKQQQQQLQTQQHQLQQQQLPQMSLQQQELLLQQQLQQQQQQQQQTSAVAAASTASSSASCQSAAQQLRLFRRYTYNNPLPAVDIKDEPIDPDDEYSGKPHDESDDMVDPTLFLERTEEEGDEALMEHMSYQYEPPLPPQPQPQPPPRPAFELSALADTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRASAAAVAAAEASKAASGMITPLKYRQEIVNAFNKCDVSGFDYEHPEKYQHFLTDEKIVFLQQNDEFLRQYQNMTCRCCNKSYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDPNFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPKKFRLKLEFRSHVYDDHAEMQRKDTMQKQCCFCGLEFEDAAERKRHYNNMDCIVSLRCVTCDAKFDNHQKFLDHVYEKHLSGFGEQVAMVAHNVSAASMDNSPGKKSTPGLGGASSTDESRSSHQANTSAANTSTLSQPKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHAADKARHTGFEYIVNADAVKIAHGNPQNIYTGRYDYVMKDLMSITNGSSAADDDENSIENATKKMRTDSGAAVSTSAGGNNASGSGNSFSSMKECPICNAVFGNNIGLSNHMRSHSAAAQSSGLSLAALHSTKSAPSGLSITTASKSAAPATAMQQQSDIQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRSEDQLNQHKATVHGNAATGAQQQDDGEAAAMPTTSHDAEASSATNPADRSGISTPASSVGGAGGGAGAGAAERSLLDTSATSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDSQMLQNHIPTCNRKPINTVTGAVADSNAPPPIYKHKTGDDEDDEASREAAANTSGVITTNALGGGELEITPIPPAGSLKIKLPEVACTMCGQRFTDQELFSKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCNKTFTQMTALKVHRKWHFRGDSKQNQADMDQSSSNTATNQTSSQIQTNHLHPLGLQAVGLMPNPHHHQHHNLSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKDEIGNLPVPPKIETDPHLQCRRCNLKFPTKFDWIEHKVGDARVTKPFGPFQWGCDLCGAYVSRKEKLINHINNHLKEREIVPVDEQPQQQTNSATVVGAPSKAAAAPETATTGTVEATGITTTTTTTEEVAADDGEFKVKVKKERLDEDEVEEAEAEVELRSQSMADGIKAEEESEDYGAADERNEAAEEEAAQNRTIATRMRQNAEQDDNESDDDDVEDDDDDDDDEDDFEEVGDMMKAHKTERATERAQKDEDYEDADADADADADDDDVDEDADDDDDVDDEDGGGADSDNAASSQQRMAAANGRAAYGERPKHPPSSKVAVAVAVTPTQPIRNSTDTSEDTSLGEEDDEDDDAEGDGDVDDSDVDSDADSDDSSSQASKDPAAPPPRARFSCDLCRLFFDTQQELQKHVKMHFLNGPGSVSLTEIKPKASSKSSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -