Basic Information

Insect: Urophora cardui
Gene Symbol: -
Assembly: GCA_960531455.1
Location: OY482670.1:16108377-16123583[-]

Transcription Factor Domain

TF Family: THAP
Domain: THAP domain
PFAM: PF05485
TF Group: Zinc-Coordinating Group
Description: The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.9e-07 0.00025 23.1 0.1 2 62 7 61 6 82 0.77

2 19 2.1e-06 0.0013 20.7 0.0 2 62 249 303 248 318 0.73

3 19 0.0002 0.13 14.4 0.1 2 84 336 400 335 403 0.72

4 19 3.7e-08 2.4e-05 26.4 0.1 2 78 410 473 409 480 0.74

5 19 3.5e-06 0.0022 20.0 0.1 2 84 497 561 496 564 0.73

6 19 9.1e-07 0.00058 21.9 0.2 2 72 571 629 570 642 0.75

7 19 2.5e-05 0.016 17.3 0.6 2 86 659 725 658 726 0.77

8 19 3.4e-07 0.00021 23.3 0.4 2 62 733 790 732 806 0.75

9 19 0.00024 0.15 14.2 0.7 3 84 819 882 817 885 0.70

10 19 2.7e-06 0.0017 20.4 0.1 2 62 891 947 890 960 0.70

11 19 0.00043 0.28 13.3 0.4 2 62 978 1029 977 1045 0.68

12 19 2.6e-06 0.0017 20.4 0.0 2 62 1049 1108 1046 1121 0.67

13 19 4.4e-06 0.0028 19.7 0.0 2 84 1138 1202 1135 1205 0.76

14 19 6.5e-08 4.1e-05 25.6 0.3 2 62 1212 1268 1211 1283 0.76

15 19 1.2e-05 0.0078 18.3 1.9 2 84 1297 1361 1296 1364 0.70

16 19 1.1e-06 0.00067 21.7 0.0 2 62 1370 1426 1369 1442 0.70

17 19 0.00026 0.17 14.0 0.3 19 84 1463 1518 1453 1521 0.71

18 19 5.1e-07 0.00032 22.7 0.1 2 66 1527 1585 1526 1600 0.65

19 19 6.8e-05 0.043 15.9 1.7 2 84 1614 1679 1613 1687 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.9e-07	0.00025	23.1	0.1	2	62	7	61	6	82	0.77
2	19	2.1e-06	0.0013	20.7	0.0	2	62	249	303	248	318	0.73
3	19	0.0002	0.13	14.4	0.1	2	84	336	400	335	403	0.72
4	19	3.7e-08	2.4e-05	26.4	0.1	2	78	410	473	409	480	0.74
5	19	3.5e-06	0.0022	20.0	0.1	2	84	497	561	496	564	0.73
6	19	9.1e-07	0.00058	21.9	0.2	2	72	571	629	570	642	0.75
7	19	2.5e-05	0.016	17.3	0.6	2	86	659	725	658	726	0.77
8	19	3.4e-07	0.00021	23.3	0.4	2	62	733	790	732	806	0.75
9	19	0.00024	0.15	14.2	0.7	3	84	819	882	817	885	0.70
10	19	2.7e-06	0.0017	20.4	0.1	2	62	891	947	890	960	0.70
11	19	0.00043	0.28	13.3	0.4	2	62	978	1029	977	1045	0.68
12	19	2.6e-06	0.0017	20.4	0.0	2	62	1049	1108	1046	1121	0.67
13	19	4.4e-06	0.0028	19.7	0.0	2	84	1138	1202	1135	1205	0.76
14	19	6.5e-08	4.1e-05	25.6	0.3	2	62	1212	1268	1211	1283	0.76
15	19	1.2e-05	0.0078	18.3	1.9	2	84	1297	1361	1296	1364	0.70
16	19	1.1e-06	0.00067	21.7	0.0	2	62	1370	1426	1369	1442	0.70
17	19	0.00026	0.17	14.0	0.3	19	84	1463	1518	1453	1521	0.71
18	19	5.1e-07	0.00032	22.7	0.1	2	66	1527	1585	1526	1600	0.65
19	19	6.8e-05	0.043	15.9	1.7	2	84	1614	1679	1613	1687	0.74

Sequence Information

Coding Sequence: ATGGCAAGTATTCGTAAATGCATTGCCGGTTGCCCAACGCTAACGGGTATCTTGCATGAGTTTCCAAGCACTGAAGAACAAGACAGACGCCTCAAATGGTTTCAGCAATTCGGATTTAACCCACCAACCAATGATACAAAAATATACTACGCCTGCTCTCGACATTTCAGTTCACGTATGATAAACGCTTGTCAAGTATACAAATCGGGTTATCCAGATCAACTTTTGACCATGTACAATACAAAAATTCCTTATGGCAATGAATCGAAAGTCGAAATAGTTAACACAACCAACGGGCCCATAACTGGAGATACTAGTGAAGACGATGAAGATGATGaggatgaagatgaagatggaGATGATGACGATGAAGATGGAgatgatgaagatgaagatgaacaAGATGATGTTCCAAAAGTATTTAACAAAGCCAACTTTCCCGTAACTGGGGATACTAGCGAAGACGATGAAGATGAAGATAATGATGCAAAAATGTCAAATGACAATGAACCTAAAGTCAAAATATTGAACGGAACCAACGTGGCCAAAACTGGTGAAACTAGTGAAGACGATGACAGTGAAGATGAACAAGAAGATACAAACGAAGTAAAAAATGAAGATGAATGTGAAGATAAAAGTGAAGGTGAagatggtgatggtgatgcAGGCGAAGTTGAAGACGAAGATGACAGTGATGACAATATATGGAGCAAGGCAGAAGAAGACGGTTTAAAAGGAAAACAATGTATAATGGGATGTGAAAATGCGCGAGCATTACGTAAATTACCACCCATCAGATCTGCGATGGAGCAACGCAAGAAATGGTTATATTTACTTGGAAAAAGGCCAAATCTCTATTTAAGCAGAGATTTGTACGTTTGCGGACGACATTTTAATAAGGAAATGAAGGTTGGTAAAATATCTCTAAAAGATATTTATCCAAATGCAAATCTCCCACCACCGCTACAAGCACCGATACCAAAAGAATTGGAAGCACAAACGGAATGCATACTAAACTGCACAGTCTATATAAGAAAGTATAAATTTCCGCCAATGGGAAACAATCCTATTAGGCGTGGCTTGTGGTTGAAGCAATTCGGACTTGACTTGGCGGACTACCAACATGAGATATTTGCTTGCGATCGTCACTTTAGCGACACCATGTTTATTGATCACTACTTGCACCCACATGCCTTGCCCGTTAGAGAACTTAAATATATGCCGCATTGCATATTAAATTGTAAAGAAGCTAATGGATTTCGTAGATTGCCATCAGCCGAGACTGATATGAAACAGCGCAAGCAATGGTTATATTTATTAGGCAAAAAACCCAATGAATATTTAACAAAACATTTATACGTTTGTGAACAACATTTTGATAAGGAAATGTTGGATGCCGAACGTGATCCAAAAGATCTGTATCCAAACGCAAATTTACCGCCGCCGCTACAAGAGCCGATACCAATAGAATTGGACGCAGAAACGGAATGCATACAAGACTGCGAGGACTATGAAAGAAAGTATAGATTTCCGTCAATAGATAGTGATGCTGCTAGGCGTGCCTTATGGCTCAGGCAATTTGGACTTGACTTAGATGGCCACCGCCATGAGATATATGCATGCGAACGTCATTTTAGCGACGACATGTTTATTGATCACTATTTGCACCCACAAGCCTTGCCCTTTAGCGAACCTAAAAATTTGCCGCGTTGCATATTAAATTGTAAAAAACCTTGTGCATTTCGTAAATTCCCATCGTTGGAGATTGAGATGGAACGACGCAATAAATGGTTTTATTTAATTGGCAAAAATCCCAAtgaatttttacaaaaaagaaatttataccTTTGCGGACTACATTTTGATAAGGAAATGTTGGCCGCCGACAGAGAACCAAAAGATCTGTATCCAAATGCAAATTTACCGCCACCGCTACAAGAGCCGATACCAAAAGCGCTGGAAGCGCAAACGGAATGCATACTCAAATGCACAAACTATATGAGAAAGTATAGATTTCCGCCAGTGGGTAGTGATGCTGCTAGGCGTCGCTTCTGGTTCAAGCAATTCGGACTTAATGCAGATTGCAACAATGCTGATTTATTTGCTTGCGATCGTCATTTTAGAGCCATCATGTTTGTAAATCACTATTTGCAGCCGCATGCTGTGCCCTTTGTAGAACGTAAAAATGCGCCGCGTTGCATATTAAATTGTAAAAAACCTTATGCATTTCGTAAATTCCCATCGGCCGAGACTGAGTTGGAACGCCGCAATAAATGGTTTTATTTAATTGAGAAAAATCCCAGTAAATATTCGGACAAAGATGTGTTCATTTGTGAGTATCATTTTGATAAGGAAATGTTGGATCCGAATAGGGATCCAAAAGATATTTATCCAAATGCAAATGTGGAGCCACAAGCACCGATACCAAAAGAGCTGGCAGCGCAAGCGGAATGCATACTCAAATGCATGGACTATGAGAGATTGTACAGCTTTCCGCGTCAATTCACCAAGTGTAATAgGCGTCTTTTATGGTTTCAGAATTTCGGCGTTAAAGTGGGTTTAGCCCAAGATGAGATATACGCGTGcgatcgtcatttcagcgaaagtCAGTATACTGAACACAACTTATGTCCATGGGCCATACCTGATAAAAATCTTAAAAGGCCAAAATGCATTATGAAATGTAGAAATGCGTATGCATTACGTAGCTTGGGAACAACTGACACTGAGATGGAGCAACGCAATAAATGGCTACATTTACTTGGCAAAAATCCTAAACATTATCTTAATGAACGCTTGTTCGTTTGTGAAAAGCATTTTGATAGCGAAATGTTGGCTGACGATAAGGATCCCAAAGATATTTATCCAAATGTCAATCTACCACCACCGCTGCAAGAGCCGTTACCAATAGAGCTGCAAGCGCAAGCGGAATGTATATTACAATGCAAGGGTTTTGAAAGAATATACAGCTTTCCGTCAATACAAACTGATATGGcgagGCGTCGTTTGTGGCATGAGCGTTTTAGACTTGACGCGAACAAGGATGAGATATTTGCTTGCGATCGTCATTTCAGTGAAAAACAGCGTATTGGTCACTATTTGCAACCATATGCTAAGCCTGATAAAAATCTTGAGATGCCAAAATGCGTTATGAGATGTCATAGAATACGTGGAAGAGCATTTTTTATCTTGGGATCATCCGATAGTGAGCGTGAGCAACGCAATAAATGGTTACATTTACTGGGCAAAAGTCCCAAAGACTATCTAAATGAATATTTGTACGTTTGCGATAGGCATTTTGATAAGGAAATGCTGGCGCTCGATAAGAATCCAAAAGATATTTATCCAAATGCAAATCTACCACCACCGCTACAAGAACCGATAACAAAAGAGCTGCAAGCGCAAACGAAATGCATAATAGATTGCGAGGActatataagaatgtataaattTCCGTCATTGGACAATGATGTTGTTAGGCGTCGCTTGTGGCTGCGGCAATTCGGACTTAACTCGGATGACTACCAACACGATATATACGCCTGCGATCGTCATTTTGGCGACGGCATGCTTGTTGATAACTGTTTGCGTCCAGACGCCTTTCCCTTTAAGGAATTAAATAATGACCCGCATTGCTTATTAAATTGTAAGAAGTCGcacaaatttcgcaaattgccaTCGCCCGAGACTGATATGGAACAACGCAAGAAATGGTTATGTTTATTAGGCAAAAATCCCAATGAATATTTAGCAAAAAATTTGTACCTTTGTGAACAGCATTTTGATAAGCAAATGTTGGCCGCCGATAAAGATCCAAAAGATATTTATCCAAATTTACAACTGCCGCTACAACCACCGATATCCAAACAGATGCAAGCGGAAACGAAATGCGTACTAAGCTGCAAAAACTATAATAGATTGTACAGATTTCCGCCTAGCCGCTTGAAATGTGATAGACGTCGCTTATGGTTTGAGAAATTCCGCTTGAAGCTGAGTCTCTACAAATATCAGTTATACGCATGCGATCGCCATTTTAGCGAAAATCAGTGTGTTTATCATTACTTGCGACTAACTGCCATgcctgataaaaatattgacaaGCCGAAATGCATATTAGAATGTAAAGCTTCGGGTAAATTACATAGCTTGGGATCAAGTGACAGTGAGTTGGAGCAACGCAATAAATGGTTACGTTTACTTGGACGCGAGCCTAAAAACTATCTGGACGATTATTTGTACGTTTGTGAAAGGCATTTTGATAAGGAAATGTTGACTGGCGCTAAGGATCCAAAAGATATTTATCCATGTGTGAATCTACCACAAGAGCCAATGCCCAAAGAGTTAAATGCGCAAACGGAATGCATATTAAAATGCATGGATTTTGAGAGAATTTATAGCTTTCCGACAATACGAAATAATGTTGCgagGCGTTGTGCGTGGCTAGAGCGTTTTAATCTTGACTTGCAGGACTACACACACGAAATATTTGCTTGTGATCGACATTTCAGTGAAAAGCAGCTTTTTGGTCGCTATTTGCGACCATATGCCGTGCCTGATAGACATTTTCAAAAACGAGAATGCATAATGCGATGTGTAAATACGCGTATATTTCGTACATTGACATCAGCGGACAGTGAGCGAGAGCAACGCAATAAATGGCTACATTTACTTGGCCGCGATCCTAAACACTATCTTAACGAATATTTGCACGTTTGCGAAATGCATTTTGATGAGGAAATGATAACTGGCGATAAGGATCCCAAAGATATTTATCCGACTAAGAATCTGCAACCGCCACTACAAGAACCGTTACCAAAAGACTTGGACATGCAAACGGAATGCATACTAAAGTGCATCAATTATAAGCGAAAGTATAGATTTCCCTCGATGCAACATGAATTGAcgagACGGCGCATGTGGTTGCAGAAATTCGGACTTGGTTTGCATAACTCTCTGCCACAAGAGATATTTGCCTGTGATCGTCATTTTAGCCAAGATATGTTTGCTGGTCACTGCTTGCACCCAGACACTGTACCAAatcaaaattttgaaaaatgcgCACACTCACAGTTTGAGATTACGTATGCGCGCAGTGAATTTATGCAATCGGCGCCTCAGCAACCAGAAGATCCTTTAGATATTCATACGGCCGGCTGTAATGACGATACCGATACCGATAAAGTGAAAGTGGAAGTGAAAGAGGAACCGGTGGAGCTACAATTTACCAGTTTTTGCATTCTTAATGATAAAATAAAAGTTGAGGACGAAACGGAAGCGGAAGAGCCACAAGTTGGCAGCGTTTACATTAGTAATGCTGAAGTGAAAGTGGAGGAGGAAGTGGTGCAAGTGGAAGAGCCACAATCTGGCAACATTGACTACGAGCACGAGCTGAATGAATTGCGACATAAAAAAGATGATAATTTAAGATGTGCTGTGAAAAGAAAAGCCACTGATGATGACGTAAACGAAAGTTGTAGTAGTAATGGcgtaaaaagtaaaaaatgtgCGCGGGCGCTTGtagaaaataaagcaaaaaaaggTGTTATGGATATTACGCTAAATGCTGCAAATGCTCCCACTGAAAGTGATGTAACAACAGCAAAGCAAACACTCACCACGACATCTGCCACAACTGAAGTGATCAACATAAGTGATGATGAGGATTCACTTGATACCATTCCATACCTGTTAGACAGCCGATCATCGCCGCTGCTAAAAgtcttaaaataa
Protein Sequence: MASIRKCIAGCPTLTGILHEFPSTEEQDRRLKWFQQFGFNPPTNDTKIYYACSRHFSSRMINACQVYKSGYPDQLLTMYNTKIPYGNESKVEIVNTTNGPITGDTSEDDEDDEDEDEDGDDDDEDGDDEDEDEQDDVPKVFNKANFPVTGDTSEDDEDEDNDAKMSNDNEPKVKILNGTNVAKTGETSEDDDSEDEQEDTNEVKNEDECEDKSEGEDGDGDAGEVEDEDDSDDNIWSKAEEDGLKGKQCIMGCENARALRKLPPIRSAMEQRKKWLYLLGKRPNLYLSRDLYVCGRHFNKEMKVGKISLKDIYPNANLPPPLQAPIPKELEAQTECILNCTVYIRKYKFPPMGNNPIRRGLWLKQFGLDLADYQHEIFACDRHFSDTMFIDHYLHPHALPVRELKYMPHCILNCKEANGFRRLPSAETDMKQRKQWLYLLGKKPNEYLTKHLYVCEQHFDKEMLDAERDPKDLYPNANLPPPLQEPIPIELDAETECIQDCEDYERKYRFPSIDSDAARRALWLRQFGLDLDGHRHEIYACERHFSDDMFIDHYLHPQALPFSEPKNLPRCILNCKKPCAFRKFPSLEIEMERRNKWFYLIGKNPNEFLQKRNLYLCGLHFDKEMLAADREPKDLYPNANLPPPLQEPIPKALEAQTECILKCTNYMRKYRFPPVGSDAARRRFWFKQFGLNADCNNADLFACDRHFRAIMFVNHYLQPHAVPFVERKNAPRCILNCKKPYAFRKFPSAETELERRNKWFYLIEKNPSKYSDKDVFICEYHFDKEMLDPNRDPKDIYPNANVEPQAPIPKELAAQAECILKCMDYERLYSFPRQFTKCNRRLLWFQNFGVKVGLAQDEIYACDRHFSESQYTEHNLCPWAIPDKNLKRPKCIMKCRNAYALRSLGTTDTEMEQRNKWLHLLGKNPKHYLNERLFVCEKHFDSEMLADDKDPKDIYPNVNLPPPLQEPLPIELQAQAECILQCKGFERIYSFPSIQTDMARRRLWHERFRLDANKDEIFACDRHFSEKQRIGHYLQPYAKPDKNLEMPKCVMRCHRIRGRAFFILGSSDSEREQRNKWLHLLGKSPKDYLNEYLYVCDRHFDKEMLALDKNPKDIYPNANLPPPLQEPITKELQAQTKCIIDCEDYIRMYKFPSLDNDVVRRRLWLRQFGLNSDDYQHDIYACDRHFGDGMLVDNCLRPDAFPFKELNNDPHCLLNCKKSHKFRKLPSPETDMEQRKKWLCLLGKNPNEYLAKNLYLCEQHFDKQMLAADKDPKDIYPNLQLPLQPPISKQMQAETKCVLSCKNYNRLYRFPPSRLKCDRRRLWFEKFRLKLSLYKYQLYACDRHFSENQCVYHYLRLTAMPDKNIDKPKCILECKASGKLHSLGSSDSELEQRNKWLRLLGREPKNYLDDYLYVCERHFDKEMLTGAKDPKDIYPCVNLPQEPMPKELNAQTECILKCMDFERIYSFPTIRNNVARRCAWLERFNLDLQDYTHEIFACDRHFSEKQLFGRYLRPYAVPDRHFQKRECIMRCVNTRIFRTLTSADSEREQRNKWLHLLGRDPKHYLNEYLHVCEMHFDEEMITGDKDPKDIYPTKNLQPPLQEPLPKDLDMQTECILKCINYKRKYRFPSMQHELTRRRMWLQKFGLGLHNSLPQEIFACDRHFSQDMFAGHCLHPDTVPNQNFEKCAHSQFEITYARSEFMQSAPQQPEDPLDIHTAGCNDDTDTDKVKVEVKEEPVELQFTSFCILNDKIKVEDETEAEEPQVGSVYISNAEVKVEEEVVQVEEPQSGNIDYEHELNELRHKKDDNLRCAVKRKATDDDVNESCSSNGVKSKKCARALVENKAKKGVMDITLNAANAPTESDVTTAKQTLTTTSATTEVINISDDEDSLDTIPYLLDSRSSPLLKVLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -