Ucar033736.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- CSRNP3
- Assembly
- GCA_960531455.1
- Location
- OY482674.1:36708268-36714404[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.56 2.6e+04 -3.8 1.2 64 97 331 364 302 383 0.42 2 4 1.6e-95 7.7e-91 305.2 6.1 2 218 528 730 527 730 0.92 3 4 0.17 8.1e+03 -2.2 0.2 30 76 898 945 888 960 0.38 4 4 0.52 2.4e+04 -3.7 0.8 59 78 1290 1309 1245 1340 0.54
Sequence Information
- Coding Sequence
- ATGTTTAGACCAATCAAGAATTTTATAAATTATATACAAAAGAATGCAAGCAGCAGTGCAATTTTTGGCAGttcaacaacaatagcaacggATACAGAAACTGAACCCGTTGCCGACGAGATTGGCATTGAAGCGACTCAGCTAGGAGGaatatcaaaaacaaaaaaagtgacAAGTAAAGTGGGAGCACGATCATTTGAAGAGCGAATCATAACTAAAATTACACCCGAGAGGGGTAGAGAAAACGGCAACGAATACGCTAACAGCAAAATGAAACGAATACAAGCTAATAAATTAAGTAATGTAGATGACACAAGCGCTCAAACAATAAGCATGGCTAATGGCGGCTTGGAAACCAATGGTTGTGGTGGTCTAGCAGGATATTCTAACGCGGAGGAGGAGGAGGTCATCGATTTTGAATTACAAATCAAAAGCAGCGTTATGGTGAGGCCACCACTCAAACCAAACGCCAACACACATGCTGTGGAAAATTTAACCGATGAAGTGGATGTAGATGTTGATACGGATGCTGATGTGGATGCAAATGGGAGCTTACTACTTGATCGTAGCGATTTAGACTCACAAGATGAATACGAAATATATCCACATAATGCCGGCGAGGATACTAATACCGAGCaggaggaggaggaggagtTAATCACCGAAGGGGAAGAATCGTTTTTGGGGTTAACAAACGAGCGAGAGCAAGGTTTCCAAGATGACGAAATTATAGTGCTTAACGAACCCGAATTGAATGCCTCGCTCGCTTCCGATGCGCCTTCCGAGGATCCATTGGCAATTGATGACTTGACGCAACCATCGCTTTTGTCTATCAAAGATACTTCAAATACACTCGATTCCTCCACAAATGATGAGGCTTCCACAAGCACCGATTTAATATGGAGCGTTGTCGAACACGTGTCGACCAAATCAATTATCAAAACCGCAAATATAGAAAAAGACTTAGACATACAGAAGCAAGACTCAACCACAACTGCAAGGAGCACGGCCGCGCAAAAGCCTGCAGCAGTGGGAGATAAGGAAGACAAAACTAAAAGCACTAACGCCAACTCCACTACCGCGTGCACAGTGCTGAGCACTCACAGTGATGCCGAACATGTTGAGGAATTACGAAGTGATGGCTCCGATTCGGGGCTGGGCAGCGAAACATCCACGTTGCAGAATACGCTGGTCAGTTTGACTGACACCAGCCAATTGGCAACGCCTAGCGATAATAGTGCAGCTAATACGCCCGATGTACAAAAAACTAAAATGATTGGTAATGACTTCGGCAACAGAAATAGCGGCAAAAGCTGCATTGATTCAGCTGCCGGCTTTACGGATAGCGTTGTAGCCACCACGTCATCGACGCCGACCGCGATTGCAAACGTTAGTGTGCCGCAAACGGCTGTTACTGCCGCTTTGTCACCTTTAAGAACCAACACCAAAGTGGTCAAACCATTACGTTCGAATTTGAAACGACGActcgacgacgacgacgacgtcGATATGCTTGTCGATCCAACACACAGCCAATCAACGCAGCTTTGTGCCGTCGGCGATGGCACAGTTGTGAAGAAGCCCAAACGTTCCATTAATTTCGATAATGTACAAGTTTATTACTTTCCACGTCAGCAAGGTTTCGGTTGTGTGCCATCGGCGGGCGGTTGTACGCTCGGCATGGGCGCACGACATATCGGCTTCAAAACACTAACACTGGCCGAACATGCGGCCGAGCTGAGGCGTGCCCATCGTCTGCAATTGCAGGACGTCAATCCGCGTGGTTCCTCCAGCGACGAGAGTGAGGAGTCTGAGGAGGATTATTTGAGTGAGGGCAGTGGCTCTGATTTGGATGCCGAGTCGAATGGCTTTCTGCAACCGGTATCGCCGAAACAGCGACGAGCGCTGCTTAAAGCGGCGGGTGTGCGCAAAATCGATGCGGCAGAGAAGATCGAATGCCGCGATATACGAAATTCGCGTGAGATATGCGGCTGCACGTGTGTGGAATTCTGTGATCCGGAGACGTGTGCGTGCAGTCAGGCGGGCATCAAATGTCAGGTCGATCGCGCCATGTTTCCATGCGGCTGTACACGCGATGCTTGCGGCAACATTGCGGGACGTGTCGAATTCAATCCAACACGTGTGCGAACACATTTCATACACACCATTATGCGTCTGGAAATGGAGAATAGACAGCAGCAGAATCCACCACTATGCAGCACAATGAGCAGCTATAGCTTATCGGCTGCTTGTGCTGCTTCCTCGACAGTTGTCGGCGGCGGCGGAATGGTGGGCGCAGGCGTAGATGTGGGAATACATGCGGGTGGTGGTGTGATGCCTTCAACACCCGCCTATGCCAATACATTACCAGCAAGTAGCTATTACAGCATGCAAACACAATCAAATTATAGTTCTGGCTATGCATCGCCTGCTTACCCCAACGAACCGGCTGCCAATTATTATCAACAACAGGGTgttggcggcggcggcggcggcgttgGCGTCGGCACCAGCATTAGCGCACACTCCACCACAACGCATTTCTGTGCGGTGAGCACAACCGAGCTGCAAACTTCAGCTCAGCAAGGCTATCATTTGGACACGTTGGATGGCGACGGTTTGTTTACAGGCACCGCTGCTGCGTCCACACCGGTTTATGGCGAAATTGTGCCATCatatggcagcagcagcagctccACGATGGGTGTGTCGGCCAGCACAGCCACTGTGAATGCTTATCATCAAAATATCAATTACGCTGCAATGCAACAAACACAGGTCGCCACCTACACTGCCTATCAGCAAACAACAACCAACACCGACTATTTATCACAACATAATCAGCAAAGCGCCGCCTCGACGGTGGCCGTGGCAACTGCAATGCCACCAACGCTTCCGCCAACCACGTACAGTTCATGTGCCGTTCCATCATTGCCACCATATGGTACCGCCACAACAACCGCAGCGGCAGCCGAATACCAGGATAGCAATTATGCACTTGTGGATACAACAGCGCCCAGTTGTATTGCAATGGAGGACAGTGGCGGCGCTGTGGGTGTTGTTGGCGTTGTTGGTGTTGGCGTCGCCGTCGACGTTGGTGTCGGAGAAAATAACTGTGCAAACATGCGCAATAACGGCGGTGTTGGTATTACGACTGCAGTGAGTGGTGGTTGCAGCGATAACAGTGGCAGCGAGCTCGATGGTGTCCGTGCACTTAGTGGCGTTAGTGGCTGCAGTAGTATCAGCCACACCGTCACGTCTAATGCTAATGCAAATAACAGTAACTTTATCCAGTTAAGCACTCCAGTGGCGAGCGCCACAAGACTGTCTCAAATAAATGATCTATTGCAACATAATCGCCGTACAACCGCCACCCTGGTGGCTGTCTcgcatacaacaacaacatgcttAAGCGTTAATAGTAGCAGCAGTGGCAGTGGCAGTGTTGATGAGCCGTTGCCCAACATTAGTAATCGAACTGTAACGACTGATTGTGATTATAATGATAGCAGCAATAGCTTGCAAGATTTCGATGAAAGCAAAAAGTTGGATGGGGGAGGAGGAGGAGAAGGTTTTGAAGGAGAAGGAGGACTTGAAGGTCCTGAAGGAGAAGGAAGAGAAGGTCTTGAAGCAGAAAGAGGAGGAGGTCTTGAAGGAGAAAGAGAAGGAATTGGAGGTCTAGAAGGAGGAGAAGGAATAGCAGAACAATGGAAGCAAACGGATGTATTAAAAGCAGACGACAAGCAAGATAAAGAGCAAAATCAAATTGTGCTAACGGAGAAGCGTTTAAATGAAACACCCAAGAAGGTAATTGAGCAGCATACTGCTGCAACGGAAGGCAAACCGCCACCAGCACCTAATGTCGAACGTACTGCGCACAAACAGCAAAATATGAGCGAATCGTCGAATGATGGCGCTGTCCAAAACAACAACGTAAATACCGCCACAGCCATTGGCGAAGATAATACAGCCGCAGCTGATGGCAGCCCTACAGCCGTTGACTCTAAGGAAACGTGCAAAGCTGCTGCGAGCACAAATGCTGATATTGCCACTGCCACTGCCATgactgatgatgatgatgatacaGCAGCGGCTGCAATTAGACACTCGGCGTATGTGAATAGCAATTAG
- Protein Sequence
- MFRPIKNFINYIQKNASSSAIFGSSTTIATDTETEPVADEIGIEATQLGGISKTKKVTSKVGARSFEERIITKITPERGRENGNEYANSKMKRIQANKLSNVDDTSAQTISMANGGLETNGCGGLAGYSNAEEEEVIDFELQIKSSVMVRPPLKPNANTHAVENLTDEVDVDVDTDADVDANGSLLLDRSDLDSQDEYEIYPHNAGEDTNTEQEEEEELITEGEESFLGLTNEREQGFQDDEIIVLNEPELNASLASDAPSEDPLAIDDLTQPSLLSIKDTSNTLDSSTNDEASTSTDLIWSVVEHVSTKSIIKTANIEKDLDIQKQDSTTTARSTAAQKPAAVGDKEDKTKSTNANSTTACTVLSTHSDAEHVEELRSDGSDSGLGSETSTLQNTLVSLTDTSQLATPSDNSAANTPDVQKTKMIGNDFGNRNSGKSCIDSAAGFTDSVVATTSSTPTAIANVSVPQTAVTAALSPLRTNTKVVKPLRSNLKRRLDDDDDVDMLVDPTHSQSTQLCAVGDGTVVKKPKRSINFDNVQVYYFPRQQGFGCVPSAGGCTLGMGARHIGFKTLTLAEHAAELRRAHRLQLQDVNPRGSSSDESEESEEDYLSEGSGSDLDAESNGFLQPVSPKQRRALLKAAGVRKIDAAEKIECRDIRNSREICGCTCVEFCDPETCACSQAGIKCQVDRAMFPCGCTRDACGNIAGRVEFNPTRVRTHFIHTIMRLEMENRQQQNPPLCSTMSSYSLSAACAASSTVVGGGGMVGAGVDVGIHAGGGVMPSTPAYANTLPASSYYSMQTQSNYSSGYASPAYPNEPAANYYQQQGVGGGGGGVGVGTSISAHSTTTHFCAVSTTELQTSAQQGYHLDTLDGDGLFTGTAAASTPVYGEIVPSYGSSSSSTMGVSASTATVNAYHQNINYAAMQQTQVATYTAYQQTTTNTDYLSQHNQQSAASTVAVATAMPPTLPPTTYSSCAVPSLPPYGTATTTAAAAEYQDSNYALVDTTAPSCIAMEDSGGAVGVVGVVGVGVAVDVGVGENNCANMRNNGGVGITTAVSGGCSDNSGSELDGVRALSGVSGCSSISHTVTSNANANNSNFIQLSTPVASATRLSQINDLLQHNRRTTATLVAVSHTTTTCLSVNSSSSGSGSVDEPLPNISNRTVTTDCDYNDSSNSLQDFDESKKLDGGGGGEGFEGEGGLEGPEGEGREGLEAERGGGLEGEREGIGGLEGGEGIAEQWKQTDVLKADDKQDKEQNQIVLTEKRLNETPKKVIEQHTAATEGKPPPAPNVERTAHKQQNMSESSNDGAVQNNNVNTATAIGEDNTAAADGSPTAVDSKETCKAAASTNADIATATAMTDDDDDTAAAAIRHSAYVNSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -