Ucar016376.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- -
- Assembly
- GCA_960531455.1
- Location
- OY482671.1:138010872-138011470[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-09 1.7e-05 26.1 0.2 4 46 17 72 14 72 0.68
Sequence Information
- Coding Sequence
- atggaGCAGCAAAATTCTAATCTTTTTTTAAACGCATACAAAGTAATGTGGTCTGATAGTGAAACTCGACTCCTTTTGGACAAATACGGCAGCTATTTTCCCAACATCGGGCCTATGAAGGCATTAAGAAACAAGAAGGAGATGTGGGAAAAAATAGCATCAGAGGTCGAAGGAAGAACGGCAAAGCAATGCGAGGAGCGCTACAAAACTATTCTCAAGAGGAGAAAAAACGCCGTTGACAACAACCATACATCTGGTGCGAAGAGGCAGAGGGTTGAATACCAAGAGGAGTTTGAGACAATCATCGCTTTAGACGACACAATAGAGCCGGAGGTGATGATGAGCAGTCAGGCAGTTCAGGTGCGAGTTCCAGTTCAGCCAAGTTCAAGTTCGAGAGTGAGAGAGGGCGAAAGGAAAAAAACCGTTCAGGAGACAATGCTGGAAATCGCCAACCGTAAAGAAGAGGCGAAGGAGAGGCGACATGCCGAAAAGATGCAGTCCCTGAACAATATACAGCAAATTCTTGCGGAACTGCTCAACAAGAATTAG
- Protein Sequence
- MEQQNSNLFLNAYKVMWSDSETRLLLDKYGSYFPNIGPMKALRNKKEMWEKIASEVEGRTAKQCEERYKTILKRRKNAVDNNHTSGAKRQRVEYQEEFETIIALDDTIEPEVMMSSQAVQVRVPVQPSSSSRVREGERKKTVQETMLEIANRKEEAKERRHAEKMQSLNNIQQILAELLNKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01505337;
- 90% Identity
- iTF_01505337;
- 80% Identity
- -