Ucar006821.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- -
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:111180457-111185760[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0031 6.4 8.3 0.5 4 45 160 214 158 215 0.68 2 3 4.1e-05 0.084 14.3 0.5 22 46 298 324 266 324 0.76 3 3 3.8e-05 0.078 14.4 0.5 22 46 439 466 409 466 0.73
Sequence Information
- Coding Sequence
- atGTTATGTCGACTTTGTCTTAAAGTGTCCGAATGTTGGTtggaaatattcgattttaatGGCCAGAAACTTGGTATAGCGGATATACTGCAGAGACATTTTTGGTTTCTGCCTGAACCCACCGATACCATTTCCTCGGTTATTTGCCGTATATGCTGGTTAAAAGTAAATGATTTCCATCAATTCTATTTGGCAGTGGAGCAAGCACATTCCATTCTTAGCAGTTCTGAAGTGAAACAGGAGACCGTTAGTGTTGCGGGAAGTGGTACTGATGAGTGTAGTAATACTGAAGAAATTAAGGAAGAGTATGTAGAATTCCAACTTTCAATGGAGGAAGAAATTGTTGATGAAAATAACGATGAGGGCGATGATTCACAAGATTTTTATGATGGTGATGAAGGCAGTACACAACCGGAATATATAATTCAGGAGTTGGAGGAAAAAAAGGAAGCTCGACCCAGAAAGGGGCTTAAAAtttGGACAGATAGCGAGACACGACAACTTCTCGACAAATATGCTGTTTATTTGCCGGAGATAGGTCCATTGAAACGATTTAGGACGAAAAAGGATATGTGGATGAAAATCGCTCAGGATTTCAGTGACAAGAGTTGGGCGCAGTGCGAAGAGCGATATAAAACTCTAGTGAGACGGCAAAAAGCTACAAAAGAAAACAACAGCAGTTCAGGCGCTAAACGGCAACTGGAGAGAATTTCGTTAATTGGCGATTCCATCGAACCAATGGTGCAAAAAAGTAGCCAAAATTGCATTACGAAAGATAGCGCTGTAGTGAAAGGAAAGTCAATTTGGTCAGAAGGCGAGACACGACAACTTCTCGACACGTATGCTGATTGTTTGCCGGATATAGGTCCATCGAAACGATTTAGGTCGAAAAAGGATATGTGGATGAAAATTGCGCAGGATTTCGGTGACAAGACTTGGAAGCAGTGCGAAGAGCGATATAAAACTGTATTGAGACGCAGTTCAGGCGAAAAACGGCAAAAGCTTCAATTTGAAGAGGAGCTGGATAAAATTTCTTTAGTTCACGATTCTATCGAACCAGCGGTGCAAATAAATAGTCAAAAGTGCATTGAGAACGATAGTGCTGTAGTGAAAGGAAAGTCAAGTAAGCAGAAAACAGCTGATAATGAACAGGGCCACAAAACAGAAAACAATATTTCTAACATGGAGCGCAAAGAGGAAATTCCCAGTTCCTGCAAATTAGTCACTGTTTGGTCAGAAGGCGAGACACGACAACTTCTCGACACGTATGCTGATTGTTTGCCGGATATAGGTCCATCGAAACGATTTAGGTCGAAAAAGGATATGTGGATGAAAATTGCTCAGGATTTCGGTGACAAGACTTGGAAGCAGTGTGAAGAGCGATATAAAACTGTATTGAGACGCAAAAAAGCTGCAATAGAAAACAACAGCAGTTCAGGCGCAAAACGGCAAAAGCTTCAATTTGAAGAGGAGCTGGAGAGAATTTCTTTAGTTGACGATTCCATCGAACCAGCGGTGCAAATAAATAGTCAAAAGTGCATTGCGAACGATAGCGCTGTAGTGAAAGGAAACTCAAGTAAGCAGAAAACAGTAGAAGAAACTCTCATTGAAGTAACAGCTATAAAAGAGGAAGCAAAGGAGAGAAGACACCAGGAAAAAATGGAAATAGCGTCGAGAATGGAAAATTTATTACAAGAATTATTAAATAAGAATTAA
- Protein Sequence
- MLCRLCLKVSECWLEIFDFNGQKLGIADILQRHFWFLPEPTDTISSVICRICWLKVNDFHQFYLAVEQAHSILSSSEVKQETVSVAGSGTDECSNTEEIKEEYVEFQLSMEEEIVDENNDEGDDSQDFYDGDEGSTQPEYIIQELEEKKEARPRKGLKIWTDSETRQLLDKYAVYLPEIGPLKRFRTKKDMWMKIAQDFSDKSWAQCEERYKTLVRRQKATKENNSSSGAKRQLERISLIGDSIEPMVQKSSQNCITKDSAVVKGKSIWSEGETRQLLDTYADCLPDIGPSKRFRSKKDMWMKIAQDFGDKTWKQCEERYKTVLRRSSGEKRQKLQFEEELDKISLVHDSIEPAVQINSQKCIENDSAVVKGKSSKQKTADNEQGHKTENNISNMERKEEIPSSCKLVTVWSEGETRQLLDTYADCLPDIGPSKRFRSKKDMWMKIAQDFGDKTWKQCEERYKTVLRRKKAAIENNSSSGAKRQKLQFEEELERISLVDDSIEPAVQINSQKCIANDSAVVKGNSSKQKTVEETLIEVTAIKEEAKERRHQEKMEIASRMENLLQELLNKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -