Ucar031777.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- dnajc2
- Assembly
- GCA_960531455.1
- Location
- OY482673.1:140022743-140025511[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.019 39 5.8 0.0 4 34 439 473 437 475 0.85 2 2 3.4e-12 6.8e-09 37.0 0.1 3 41 616 658 614 662 0.91
Sequence Information
- Coding Sequence
- ATGTTGGAATTTATCGATATAAATTGTGAGTTTTCGTTTAGTCGGAGAAATGTGGAGCGCGTTGGTCCAGCATTTCTCAATTTACAAAAGTACAATGCGAACCCTGAGGAGGCGACGCAGAATGACGAGGACGATGACGCGAACGACAAGCTACCTGAGGAATTTGCTGTGGATGTGGAATATTTAAAGTCGCTGGATCCGAAAGAATGGAAAGATCATGATCACTATGCAATATTAGGTTTGGGGAAATTGAGGTTTAATGCAACAGATGATGATATACGACGTGCTTATAGACGTATGGTGCTAATGCATCATCCGGACAAGCGGAAAGCTAAAGGCGAAGATGTGAATGCGGATGATGATTATTTTACTTGTATAACAAAAGCATATGAAATACTCGGCACGCCGAAAACGCGACGCGCTTATGACTCGGTCGATCCTGAATTCGATGATACCTTCCCTACACAGGCCGAAATCGACAAGAATATTTACGAATGTTTCAATAAATGTTTCGATTTGAATGCACGCTGGAGCGAAAAGAAAAATGTGCCGAAATTTGGTGATGGCAATTCAACACGCGAGCAAGTCGAAGAATTTTACAGCTTTTGGTATGAATTTAAATCGTGGCGTGAATTCAGCTATTTGGATGAAGAGGACAAAGAAAAGGGACAAGATCGTGATGAACGCCGGTGGATTGAGAAGGAAAATAAAGCGTTGCGTATAAAGCGAAAGAAAGAGGAAATGATGCGCATACGAGCCCTAGTCGATTTAGCTTATAACAATGACAAACGCATACAGAAATTCAAGGCGGAGGAGAAGGAGCGAAAACTAGCAGCGAAACGTGCGAAAATGGACGCAGCACAAGCGCAAAAAGCTGAACAGGAACGAGTGCAACGTGAAGCTCAGCTGGCCAAGGAGCGTGCCGAGAAAGCGGAACAAAAGCGAATCGAGCAAATACGCATCGAAAAAGAGCAAGCGAAAAAGGCGCTTAAGAAGGAGCGAAAAACTTTGCGTGATAAATTGAAAGAAGCCAAATATTATGGCAACAACGACAAGGAGACGCTCAAGAATATGGAAGGCGTGGAAAAGATTTGTGAGCTATACAACGTGAACGAACTGCAAGAGCTAAATAAAGATATTGAGAAGAAGGGGCAAAATGCATTCTTTGCTGCGCTCAAAAATTGCGAACGTAAAATTACCGCCGAGCTGGAGGAGCTCaatctgcaacaacaacaaaaacaacaaaagagCAGCAACGGAAATAGCGCCAAAAACGCTGGCAGCGATAAAGAGGTGGTAAAGAAGGCCGATTTATGGAATGCTGAGAATATGCAATTGCTTATCAAATCAGTCAATTTATTCCCAGCTGGCACAGCACAACGCTGGGACGTTATAGCAGCCTTCATCAATCAACACACCACCGGCGGAGTGACGGTGAGCGCACGCGATGTACTCAACAAAGCCAAGGCAATGCAAAATAGTGACTTTTCGAAGAGTTCACTCAAAACGCAAGCGAATGATACGGCttttgaaaatttcaataaatcgAAAAAGGATGTGCAAACGTGCAATGATATAACGGTAGTCAAtgaacagcagcagcagcagcagcaaaaacaacaaaaatctGTTACAAATTCAACAGAGCAATCAAGCAAGCAAACCACGAATGGCGGCGGTGATGTGAATAAATCAAATAagacaccaacaacaacaacaactactacTCCATTAACGAATGGCTATAAGGAAGCATGTGAGGATGATAAGACTTCAACTGCAACTGCTAACGCTGCTGCCGCGGCAGGCTGTTCTGCTGCTCCAGCTACAGCTAAAGCGCCGAAAACATGGACCAAGGAAGAGCAAGCGTTACTCGAACAGGCAATTAAAACTTATCCAATATCGACGCCCGATCGTTGGGATCGCATTGCGGAATGTATACCGAATCGCAGCAAAAAGGATTGCTTGCGTCGCGTTAAAGAATTGGTTGAATTGGTTAATTCGAAGAAGGAGGCTCAACAGGCGGTCAAATGA
- Protein Sequence
- MLEFIDINCEFSFSRRNVERVGPAFLNLQKYNANPEEATQNDEDDDANDKLPEEFAVDVEYLKSLDPKEWKDHDHYAILGLGKLRFNATDDDIRRAYRRMVLMHHPDKRKAKGEDVNADDDYFTCITKAYEILGTPKTRRAYDSVDPEFDDTFPTQAEIDKNIYECFNKCFDLNARWSEKKNVPKFGDGNSTREQVEEFYSFWYEFKSWREFSYLDEEDKEKGQDRDERRWIEKENKALRIKRKKEEMMRIRALVDLAYNNDKRIQKFKAEEKERKLAAKRAKMDAAQAQKAEQERVQREAQLAKERAEKAEQKRIEQIRIEKEQAKKALKKERKTLRDKLKEAKYYGNNDKETLKNMEGVEKICELYNVNELQELNKDIEKKGQNAFFAALKNCERKITAELEELNLQQQQKQQKSSNGNSAKNAGSDKEVVKKADLWNAENMQLLIKSVNLFPAGTAQRWDVIAAFINQHTTGGVTVSARDVLNKAKAMQNSDFSKSSLKTQANDTAFENFNKSKKDVQTCNDITVVNEQQQQQQQKQQKSVTNSTEQSSKQTTNGGGDVNKSNKTPTTTTTTTPLTNGYKEACEDDKTSTATANAAAAAGCSAAPATAKAPKTWTKEEQALLEQAIKTYPISTPDRWDRIAECIPNRSKKDCLRRVKELVELVNSKKEAQQAVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357879;
- 90% Identity
- -
- 80% Identity
- -