Ucar016988.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- DNAJC1
- Assembly
- GCA_960531455.1
- Location
- OY482671.1:153735558-153737476[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6 7.3e+03 -1.5 0.2 3 12 19 28 17 37 0.73 2 3 2.2e-06 0.0044 18.4 0.0 4 38 301 338 298 339 0.89 3 3 5.7e-10 1.2e-06 29.9 0.6 3 43 394 439 392 441 0.92
Sequence Information
- Coding Sequence
- atgaaattttatttaaaaattttgctgcTGTGCAGCCTTTACTTGGGCACCAACGCTTGGGACTCTGAGGAATTGGAAATATTCGATCTGGTCGAAGAGGTCAATCAAAATTTCTACGATTTCATGAACATATCACTGGAAGCGACTAATAATGAAATAAAACGCGCTTTCCGATCGTTGTCTATCGTACTGCATCCGGACAAGAATCCATCGGAAGATGCAAATATACAATTTCGTAATTTGGTATCCATATACGAGGTGCTAAAGGAGAAGTCGAAGCGAGAAAAATACAATAAGGTTTTGCGCGAGGGTTTACCAAATTGGAAGTCGGCATTGTATTATTATCGACGTATGCGAAAGATTGGATTGTACGAAGGAGCTGCCATTCTATTTGTGATTATAACTGTTGGACAATATTTATTTGCTTGGGCAGCATATTTGGAAAAGAAGTATACGGCAGAGCAAGTTTTTGGATCGAAGTTGAAAAAGTTGCAGAAAAAGAATAAAAGCATTGATATGGATGTTATACTTAAAGAAATACCATCGCCATCAATTTTTAATACTCTACCCTTTCAAATACCATTATTTATTTGGCATTTGCCCGGAACGATAAAAGACGCATTTAGTAAGGCTAATGAACTTAAAGAAATCGCACTCGAAAAACGCCGTCTTGAAATGGAGGAGGTAAAACGACAGGAAGAACTTGAACGTGAGTTGGAAGAGCAGGCGCGTCTGCGAAAAGAAAAGAAGGAAAACTTACGAAAACGTCGCCAAAATACCACAGCTCCTGAAAAGACTGACGAAGAACTGCGGGGCTATGCACAAATACAAGCACGCGAGCTAACCGAAGATGATGCAGTGAAGCCTGTGCAACAAAAGACAACATTAAGCGGTGGCTTTTGGACTGATGAAGATCTCACCGAGCTGATACGCTTAGTTAAAAAGTATCCAGGTGGTTCCAGTGCACGCTGGAATATTATTGCAGAAACAATGAATCGTTCCGTTCAAGAAGTAACATTTATGGCAGCAAAAATGAAGGAGAACGGTTATCGTCTGCCCGGCCAAAGTGCCGATCAAGCGAGCAACTTAACATCAAACACAGCAGAAGTTGCCACAAAGAAGGAGAAGGTGAAGACAACTGCCGCGGCAGCTGATAAAAATATACTTGTACCCGAAACGAATTGGTCGCAAGAGCAGCAGCGTGCTTTGGAATCAGCCATAACTAAATATCGAAAAAATGCCACGGGTGATCGTTGGCAAAAAATTGCCAATTGTGTGCCAGAGAAAACGAAGGAGGAATGTTTGCTGCGTTACAAATATTTATGTGAATTGATAAAGTCACAAAAGAAGAGTGAAGAAGAAGCGGCAACGGCAACAGCAGCGGAAACTGCCGCTGAGGCAGAAGATGTAAACAATGAAAAAGTTGAAGCTGTTTTTGAGGAAGATTCAAAGGTGAACAATGTTGATGTAGATGAAGGCGTTGAGTTGTCGACAACGGAGAAGGCGAGTAAAAAGCGTAGCAAACGGAAAGAGCGCCGACGCAAACGTGATATGTCGGAAAATGAGGATTCCGATGATGCATATCAATATGAATTGAACTAG
- Protein Sequence
- MKFYLKILLLCSLYLGTNAWDSEELEIFDLVEEVNQNFYDFMNISLEATNNEIKRAFRSLSIVLHPDKNPSEDANIQFRNLVSIYEVLKEKSKREKYNKVLREGLPNWKSALYYYRRMRKIGLYEGAAILFVIITVGQYLFAWAAYLEKKYTAEQVFGSKLKKLQKKNKSIDMDVILKEIPSPSIFNTLPFQIPLFIWHLPGTIKDAFSKANELKEIALEKRRLEMEEVKRQEELERELEEQARLRKEKKENLRKRRQNTTAPEKTDEELRGYAQIQARELTEDDAVKPVQQKTTLSGGFWTDEDLTELIRLVKKYPGGSSARWNIIAETMNRSVQEVTFMAAKMKENGYRLPGQSADQASNLTSNTAEVATKKEKVKTTAAAADKNILVPETNWSQEQQRALESAITKYRKNATGDRWQKIANCVPEKTKEECLLRYKYLCELIKSQKKSEEEAATATAAETAAEAEDVNNEKVEAVFEEDSKVNNVDVDEGVELSTTEKASKKRSKRKERRRKRDMSENEDSDDAYQYELN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192020;
- 90% Identity
- -
- 80% Identity
- -