Basic Information

Insect: Urophora cardui
Gene Symbol: basR
Assembly: GCA_960531455.1
Location: OY482672.1:121585762-121589435[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.025 52 5.4 0.0 11 46 46 87 44 87 0.80

2 5 9.3e-13 1.9e-09 38.8 0.2 1 45 93 138 93 139 0.94

3 5 1.7e-06 0.0035 18.8 0.1 3 46 149 196 149 196 0.93

4 5 3.9e-10 7.9e-07 30.4 0.0 2 45 203 247 202 248 0.91

5 5 1.1e-09 2.3e-06 28.9 0.0 2 44 255 298 254 300 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.025	52	5.4	0.0	11	46	46	87	44	87	0.80
2	5	9.3e-13	1.9e-09	38.8	0.2	1	45	93	138	93	139	0.94
3	5	1.7e-06	0.0035	18.8	0.1	3	46	149	196	149	196	0.93
4	5	3.9e-10	7.9e-07	30.4	0.0	2	45	203	247	202	248	0.91
5	5	1.1e-09	2.3e-06	28.9	0.0	2	44	255	298	254	300	0.96

Sequence Information

Coding Sequence: ATGGCCAATAAGACTTTAGTTCTACTCACGATTCCAGTACTTGATTACTTGAATGATCACTTGAATGATCACGGCTTTCAAGTTAAAAacaacaaatgcaaaaaaatggCAAAACAAATAAGAATTCATACAGAAAAGTTGTCAGCCTTATTGGAAAAAGTTGATGAGAATTTTACAATCGATTGGAATCAAATTTCTGCACATAATCTAAAATATCGACATCCGCCGAGCAGTTGTAAAGCAATGTGGCAAGTGTACCTGTGTCCTTCGTTGAAACGTAGTGCCTGGACGGACGATGAAAATAAACAACTTTTGCAAGCAGCACAGAAGCATAATTATCAAAATTGGGAAAACATAGCTAAATCAGTACCGAGACGTTCAGACTATCAATGCTTTATACAATATCAGACGCGTTTATGCTTTACGGACGCAAATCGTTATATTCGTTGGGATAAACGTGACGATGCCAAATTGTTGGATATAGTGCAGAAGAAAACAATTAATGGTGTGATAAATTGGAATGCAGTTGCAGTGTATTTTCCACAAAAACCAAAGAAATCTTTGCATCAGCGGTATCAATATTATTTGCGTCCCGATATTAGTCATGAACCGTTTACGCCAGAGGAGGACCTCGTGCTACTGGCCGCAGTCGAAGAATATGGCGAAAAATTTGCCCTAATTCCACGCACATTATTTCCGCATCGCTCTGTAGTACAATTGCGCATGCGTTACAAATCTACGCTTAAAAGTCGCCATAAGGTGGGACCATGGTCCATAGAGGATGACAAAAAGCTAATGGAATTCGTAGCCGAGAATGGTACATCATCTTGGTTGCGTTGTGAGAAATTGCTTGGCAATCATACGCGCACCAGCTGTCGCACACGTTTCCTAACCATACAGAAATTTTTCACAAATCATCCCGACGCAGCAATCGAAGATATACCAAGAAAAAAAGAGTGCACTATAAGGAGAAGTGTTATAACAACTGAAAATTGGGTAGAAAAGGTAGCCGAATTACGTGAAAATCCAGATGTAACGCTTGCACCTGTAGGAATAAGAGAAAAGAGGGCTTTAGAGCGAACCGCAAGGGCCAAAGCAGAGGCAGAAGCAAAACAAacagctacaacaacaacaacaacatgtcAGCCAACAAAAACCGCAAGGGCCAAAGCAAATGCAGAGGGAAAGGCAGCGGCGGCAGTAATGAATTCGAAAAAGTGTCGAACGCGAAAACTAAAGAGTCAAAAAacagctacaacaacaacaacagaaattGAGCCAATAAAAGTGGAGCTGCAAATGCAAAAACCTCCAAAATTAGTAAAAAGAATACAGCCGTATATTGAACGGTTGCGCGCCAATGAACAGCAACTTTATCATTTCTTTAAGTATGCCTACAATTTTCAACTCGGCACGGATGTATGCACTAAAGCACCAAATAGGCTGATAGGCAAAGTGGCTGCGTCGCTTGATTATGATAATGGAAATGATGAAATTGTTGCTAATAAGCAATTCGTTGGTGGATACACTTTACCACCCAGCTGGTCGACAACAATTGCTTTTCGTGCTCTATGCATACAATCGGCACAGCTACAATTAGAACAGGTGCAAACGCAAGAGCAAGCACAGCCGGTAAAGGAAGACGAGCTTGCGGAAGATGGAGAGGAGTTCATCAGAGGAGATGTTAAGCACAACAGTAAAGTTGAGGCATCGTGTGATGGTTTTGGTGACATAGTAAATGATCATCCGGCGGTACAACGTTTTCGTAATCGCATGTTTGCGCTCTTCTTTCAAACGGCACTATTAAGCCGCTTGGAGCCGGCACGTTTCAAGCATCTCACGGAAATGGTTCCACCCATAGCACATGCAGAAATTCGTAAAGAAATCGGTGAAGGCAACACACAGCAATTCACATCGGCGAATATAACGGAAGAGCAACggctacaacaacaaacacCTCAACCAGCATTATTTGTGGATATTTCTCGTGTAAAGAGCGAATATGCCGCGGAATCGATGCAATCGAATAACGACGGAATTTCTGTAAATGAAAGGCCATTAAATGCAAAAATTGTACTGGAAGAAATTGCAGCCGAAAACGGAAGTAACATTGCGGAAACAGAAACCGCAGGGCTAATGGAAATGCCGGCGGCCGTTCAAAACGCTAGAATGTCAACAGTAAATACATCCACCACGAAATATACCGTAGAAAGCAATCGCTCTGTGGAGCTAAATGAAACACCAATAGAAAAATCAGCAGCTGCCTTTCAACAACAACCATTTCAAATATGTAATATTAAAACAGAATGTGTCGCCTCACATTCTGCAACACTGCAACCACATGTATTAAATATATCAACACAAAAAGAAGAGGAAAAAGTACGAACAGGCAAATCGTCGTTTGTCAACGTTTTCGGCGCGTCTTCTGAACCCGAAGCGCAGCCTGCAGAGAAGCGTATTTGCCTTGCGGCCAGCAGCAGTAGCAGCAGCAACAGTAACAGTCATCATAACACTGAATTAAAATTGGCAACAGTTAAGACTGAATTTGAATAG
Protein Sequence: MANKTLVLLTIPVLDYLNDHLNDHGFQVKNNKCKKMAKQIRIHTEKLSALLEKVDENFTIDWNQISAHNLKYRHPPSSCKAMWQVYLCPSLKRSAWTDDENKQLLQAAQKHNYQNWENIAKSVPRRSDYQCFIQYQTRLCFTDANRYIRWDKRDDAKLLDIVQKKTINGVINWNAVAVYFPQKPKKSLHQRYQYYLRPDISHEPFTPEEDLVLLAAVEEYGEKFALIPRTLFPHRSVVQLRMRYKSTLKSRHKVGPWSIEDDKKLMEFVAENGTSSWLRCEKLLGNHTRTSCRTRFLTIQKFFTNHPDAAIEDIPRKKECTIRRSVITTENWVEKVAELRENPDVTLAPVGIREKRALERTARAKAEAEAKQTATTTTTTCQPTKTARAKANAEGKAAAAVMNSKKCRTRKLKSQKTATTTTTEIEPIKVELQMQKPPKLVKRIQPYIERLRANEQQLYHFFKYAYNFQLGTDVCTKAPNRLIGKVAASLDYDNGNDEIVANKQFVGGYTLPPSWSTTIAFRALCIQSAQLQLEQVQTQEQAQPVKEDELAEDGEEFIRGDVKHNSKVEASCDGFGDIVNDHPAVQRFRNRMFALFFQTALLSRLEPARFKHLTEMVPPIAHAEIRKEIGEGNTQQFTSANITEEQRLQQQTPQPALFVDISRVKSEYAAESMQSNNDGISVNERPLNAKIVLEEIAAENGSNIAETETAGLMEMPAAVQNARMSTVNTSTTKYTVESNRSVELNETPIEKSAAAFQQQPFQICNIKTECVASHSATLQPHVLNISTQKEEEKVRTGKSSFVNVFGASSEPEAQPAEKRICLAASSSSSSNSNSHHNTELKLATVKTEFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -