Ucar010313.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- ct
- Assembly
- GCA_960531455.1
- Location
- OY482671.1:21999369-22050311[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2 4.6e+04 -4.2 0.1 12 33 65 86 64 91 0.79 2 4 1.1e-26 2.5e-22 80.0 0.0 3 71 852 921 850 927 0.94 3 4 6e-32 1.4e-27 96.8 0.0 3 77 1341 1416 1339 1418 0.96 4 4 8.4e-31 2e-26 93.2 0.0 3 76 1586 1660 1584 1663 0.96
Sequence Information
- Coding Sequence
- atGCATATAGGTAAAGTATCTTCTTTGCGCTCACCGAAAACAATAACCACTTGCGGTATTAAAGCGCTCGTCGATGAGGTACAACGCCTGCGCACCCTCGAGCAAACACAACTCAAACAAATACAACGATTAGAAGATCATTTGGAAAGCAAGCGACAGCATATCATGCGTTTGGAAACGCGACTCGATAAGCAACAAATCAAAGAAGCGTTGGCCGAAGCGGCaatagcaacagcaacagcagcagcagcagcagcagcaacaactgCAAGTGCTACGCCAACAGTCACACTTGCAACAAACACAGTAAAAACCACAACAACATCAACTGCTGTGCCAACAGAAACACATATCATccacgatgatgatgatgattatgatgctGATGATGCTGCAATTGAAAATGTTGCAGAGCGCGAAGAAGACAACCATGTTGCTAACGATGATGATGAGAATGTGGCGGTGACTAAAATTGATTTAACCAGCACAACATCAGAAACAACAACCAGAACAGAGCATGTTAGCGCTGCTGCTGAGTCTGAGTCTGCGCTTGATGTTGAATGTGAGAGATTAATGGCAGAAGCGGAGCctacagcagcagcaacaacaacaacaacaacacctgCGTCCGCAACAACACAGAGTGATAAGTGTGACACAGCAataaaaccaacaacaacaacaacaacaacaacaacagagcCAACAGCAGTtagagcagcagcagcaacaacaccaacagcaacagcaacaccaccaccaacaacaaTTGACGAGTTGAAAATCAAAAAGGAGGCACCACACAGCCCACTCGATTTGGATGTGCTTAGTCAGCAACAATCGGCTATAGCTGCTGCTGCGGCCGCTGCTGCCGCCGCCTGCGCCAACGATCCGAATAAATTCCAGGAATTGCTGCTGGAGCGACACAAAGCGTTGGCGGCCGCTGAGGCGCTCAAAAGTGCAGCCATTACAGAGGGAACAACAGTTGCTACAGACAGCCAGCAACAAATGGATAAAGCTGAGCCGGACGAGGACGCAGTGAACAGCAACAGTCAAGCAGAGACCAAAGTTAAAGACAATGCTGAGATatcaacagcaacagcaacaaaaaatgACGAAGAATCACAAATAATGCCAAAAATACCAAAAATCGAAATTGtcgatgacgatgatgatgtcGATGCCAATGCCAATGCCGACGCAGACGCCGACGCCAATGCAGAAACTGCCAACCAAGAAACGCCCAATGAAAAcgaaaatgaaaacgaaaatgaaaatttggctGCTGTGCCATGTGaaaatcaagccgaaaacgttcaCAATCCGCCCACAATCGATGTGGACGCCTTAGAGTCTGCAGGCGATTTAGCTAAAACTGAGTTGCAAGCGTTGCAGCAACATGTTGCCGATACGACAAGCGCAACCGCAAATGTAGCGCAGGGTTTCGATGAGAATGTCGATGCTTTTGGCACGCTGCTCGGCGAAGAGTTTATGAGCTCATATTGGCGTGGCTTTAAAATGCCCAGCGCAGCAACAAATAACGGTAATAATGCTGCGAGCGCCTCGGCGAAAGCGTTAAATGCCAGCAACATGTTCGCCAATCAGCTGCAACATCGCCATTTTCCGCCAACGCATCACCATGCAATGCACCAGCACCAGCACGCAATGCACCACCACTCAATGCACCAGCAACAGCACCACCAGCACTCAACACTTTTGTCACACCACCACCATATGCACCACCCAAATTTGCAAcaccaacagcaacagcagccacAGAGTGCATCCGCCGCAACAGCGCAGCAACATGGACCTTCGTCCACTGCGCTGCTTAGTCAATTAGTTAATTCCACTTTTTCAACAGCACCACCTACATcatcttcctcttcttcttgttcttcttccaCCTCTTCCTCTCTACGCACAGATGCGCTGCTGCAGTCCCACCATCATCCACATCATCACCATCACGCGGCGCAGCAAAGCTCTCAATCAGCCGGACCGCCACCGCCGCCACCAATGCCGCCAAATCATCACCTGCATCAGCCACATCTCGGCGCCGATGCGCATTATAAATCGAGCGCggacaacagcaacaacaacaatcacgAATTATCATCCGCGTGCAGCACACCGTATGGCCAGCATGGAGGCGAACAGCGTGACCGCGACCGCGACGAACATCACTCGGCGCTGAATGGCCCGCCGCTACCACCAaagtcgtcgtcgtcgtcgtcacTGCTGCTGGAGGACAACAACAACACACTTTGCGGCACACCTGCTGGCGCTAACGCACCCAGTGCTGCCGCCATGGCTGCCGCTGCCGCAATGGCCGCTCAGCAGGCACCACATCCCCACCTGCCACCCGGCTATCTGCATGCGCTACCATTCCAATTTCAGGATCGCGGTCATTTCCGCTTCGCTGACGATCTGCAACTGCCGCCCGGCGCCTCAATGGCCGGCCGCCTCGGCGAATCGCTCATACCGAAAAGTGATCCGATGGAGGCGAAATTGCAGGAAATGTTGCGCTACAACATGGACAAATATGCCAATCAAGCATTGGACACATTGCATATCTCACGTCGCATACGCGAATTGCTATCGGTGCACAATATCGGCCAGCGGCTGTTTGCCAAATACATTTTGGGCCTGTCGCAGGGCACCGTATCGGAGCTGCTGTCCAAGCCGAAGCCGTGGGATAAGTTGACCGAGAAGGGACGTGACAGCTATCGCAAAATGCACGCCTGGGGCTGTGATGATAACGCTGTGATGCTGCTCAAGTCGCTGATACCGAAGAAAGATGCTGGCTTACCTCCGTATGGTGGCCGCGAAGACTCCATGTCCGATGATCGTCTTGCACACATTCTAAATGAGGCATCGAGCATGATTAAAAATACCACACCGGGTTCATTGCAGCAACAGCTGAAGGAGGCCGAACAGCGACAGCTGCAACAGCAGGAGCAACATAGACGTTCAGCGCATGACGATTCACAAATGAGCAATGAAGATTCCAAGTCACCACATCCGCTCAGCACATCGCCCTTCTACAAGAGCAGCAGTCAGCTGAAGCAAGAACAGGAAGCGGCAGCAGCAGCTGCAGCAGCCGCCGCACAACAGCAACAGCATCGCTTGCGGCAGGAGCAAGAATTGACACCGGATAAAATGGCGCGCATCTATCAGGAGTTCTTGATGCGTACGCCACGCGAGACCGCCTTTCCAGGTCTTTTGCTCTCGCCATTTTTCAATGCTGCCGGTGGTATGCCCAGCGGCTGTGGTCTACCGAATATGATGGGCGCTGGTAGTGGCAGCGGCACCGCTGCCGCCGATGACAATTTACGTCTTGCCTACGAACGTGAAATGGCCAAATTgcagcaacaacatcagcaaaatgccgccgccgccgctgcGGCTGGTAACTTGCCGAATTTCCCGAATTTCTCCAATTTGATGGCACTGCAACAGCAGGTGCTGAATGGCGCACAAGATTTGACGCTGCTAAAAGATCCCAAAGATGCTATTAAAGTGAATGGACAACGCAGCAACATTGAGCATTCGAGCAACTCGATGGATTCGCAAAGTTGCAATAGCAATAGTAATGCGCCAACTAGCCTGTCCAGCAGTATGCCGAACGCCAatagcaataataataatgccAAAGACTTGCCAAGCAATGCCGATGCCAATGCAGAACGTCACGGCAACGCAAACATGTCGCTGCATCAGCGTAAGCTGGATGGCAGTGGCAGCCACACACCCGTGCCGCCGCCGCCAACGAGTAATGCTGCCATGCATGGCGCCAACGGCAACTCGACTGCGCCTAGCCCATTGAGCAACTCTATATTACCGCCCGCTATGACGCCCACTGATGACTTTGCCACGAATGCAAGCCCTTTGCAGCGCATGGCTTCCATCACCAATTCGCTGATTACACAACCACCCATCCCGCCACATCATACGCCACCGCAACGACCCACCAAAGCCGTTTTGCCACCAATAACACAACAACAGTTCGACATGTTCAATAATCTCAATACCGAGGACATAGTGCGCCGCGTCAAGGAAGCGCTCTCACAATACTCCATTTCACAGCGCCTATTCGGCGAGTCGGTGCTTGGATTGTCGCAAGGCAGCGTCTCTGATTTGTTGGCGCGCCCCAAGCCATGGCATATGTTAACGCAAAAAGGCCGCGAACCATTCATACGCATGAAAATGTTCTTGGAGGATGAGAATGCCGTACACAAGCTAGTGGCCAGTCAATATAAAATAGCGCCTGAGAAATTGATGCGCACCGGCACCTTCAGTGGCACACCGCAAATACCACAGGGTTTGGCTAACAAAATGAGCGCTTCACTGCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAAGAGCCCACACAAGCGCAGCACATTATGCAGCAAATGCAAGCCGCCGCCATGTCCGCAGCCATGCAACAGCATCAGCAACAGCAAGCGCAGAGTCAGCAACACGCTGCGGCTGCGGCCGCACAGGCGGCAGCGGCTGCGCAGGCAGCACACCACCAAAGTATGCTGCTCACCTCACCTGGCCTGCCGCCGCAACATGCCATCAGTCTGCCACCGACAGGCGCAGCCGTTGGCAATGGCGGTCCCGGTACACCGGGCAGCGAAAAGAAACCGATGATGATGCCCATACATTCGCCACATCAAGCGAACGCTATGCGCAACATGCATCAGCACATGTCGCCAACGGTTTATGAAATGGCGGCGCTTACGCAGGATTTGGATACGCAAGTGATTACGACAAAGATTAAGGAGGCGTTGCTGGCCAACAATATTGGACAGAAAATATTCGGCGAGGCTGTGCTCGGTCTGTCGCAAGGCTCAGTGTCAGAGTTGCTGAGCAAACCCAAACCCTGGCATATGCTGTCGATCAAGGGGCGTGAACCCTTCATACGCATGCAGCTGTGGCTATCGGATGCCAACAATGTTGAACGTCTGCAAGTGATTAAGAATGAACGGCGTGAGGCGAGCAAACGGCGGCGTTCGACGGGTCCCAATCAACAGGACAACAACTCGGACACATCCAGCAATGATACCAACGACTTCTACACCAGCTCACCCGGACCCGGCTCGGTGGGTTCGTCCGTGAGTGGCGCACCACCAAACAAAAAGCAACGCGTACTCTTCTCCGAAGAACAGAAGGAAGCACTGCGTCTTGCCTTCGCGCTCGATCCTTACCCGAATGTAGGTACCATTGAGTTTTTGGCCAACGAGCTTGGGCTCGCCACACGCACCATCACCAATTGGTTCCACAATCACCGCATGCGTCTCAAACAGCAAGTGCCACATAATCAGCCCATTGGCGCTGACAATCCAATACCCAGCCGCGAGAATACCAATTCAACGCCTTTCGATCCCGTCCAATTCCGCATTTTGCTGCAACAGCGTCTGCTCGAGCTGCACAAAGAGCGCATGGGACTTAGTGGCGCACCAGCGCTACCCTATCCGCCCTACTTTGCTGCTGCCGCGCTGCTGGGGCGCAGTTTGGCTGGCATGCCGGGCGCTGCGGCCGCCGCTGCTGCAGCAGCAGCCGGTGCTGGCGCTGGTGGCGAACCCGACTTGCACGCTCTCAATCAAGCCTTCCGAGAGCAAATGCGCGGACTCGATTTGTCGATGAGTTCGTTGAAACGTGAGCGCAACGATGATTTGGAAGACGATCTCGACGAAAGTCACCTCAGCGACAATGAATCGTTAGACGGTGGTGATAACAAATCGCTCGGCGGCGGTGAATACAAAGACGACGCCGATTCGACGCCAAGCTCCACGCCACTCTCCTCAGCAGCCAGCTACTTAATGGGCGGCCTAGCGGCCCACATGCGCAGCTCCAGACGCAAGCCAGCCGCACCGCAATGGGTCAATCCCGCCGGCCCAATAACAATGGGCGCCGATGCCAAAGGTATGGTGGCAGCAGCTACTGCACCCGGCGGTGGCATCATACCACCAAACGCCGAGCAAGAGCACGTTATTAATGGTGTGTGCGTTATGCAACCGTCCTCCGCCGAATTTAGTTGCAGCGAAGGTGGTGATGGTGATACAGCTAACACCAGCAACGACGGCGGTGATATGGAGTCTGCAAACAAAAATGTTGCCGATATGTCTGCAGCGCATGATATTGCCGTCGAACAGCGCTTTATGGAACCCGAAATGCGTATCAAGCAAGAGCGGGAGGACTGTGATAGCGACGATGACAATGCAACATCAACAGCATCGGCATCCGCTTCACTAACAGCGACAACCAGCACACGCGAGGAGAAGCTAAAGGTGGTGAGTGAGGATAAGCTGCGTATGGTGCGCGTGCAGCGACAAAGTCACGAGGACGATgatgcagcagcagcagcgtcCTGCGCGCCAGCAACAACGAATGCTAATGCCGCGATGCCGCCGACAGCAGCAGCAGTGAGTGCAGCGAGTGCGTGGAGTTATTAG
- Protein Sequence
- MHIGKVSSLRSPKTITTCGIKALVDEVQRLRTLEQTQLKQIQRLEDHLESKRQHIMRLETRLDKQQIKEALAEAAIATATAAAAAAATTASATPTVTLATNTVKTTTTSTAVPTETHIIHDDDDDYDADDAAIENVAEREEDNHVANDDDENVAVTKIDLTSTTSETTTRTEHVSAAAESESALDVECERLMAEAEPTAAATTTTTTPASATTQSDKCDTAIKPTTTTTTTTTEPTAVRAAAATTPTATATPPPTTIDELKIKKEAPHSPLDLDVLSQQQSAIAAAAAAAAAACANDPNKFQELLLERHKALAAAEALKSAAITEGTTVATDSQQQMDKAEPDEDAVNSNSQAETKVKDNAEISTATATKNDEESQIMPKIPKIEIVDDDDDVDANANADADADANAETANQETPNENENENENENLAAVPCENQAENVHNPPTIDVDALESAGDLAKTELQALQQHVADTTSATANVAQGFDENVDAFGTLLGEEFMSSYWRGFKMPSAATNNGNNAASASAKALNASNMFANQLQHRHFPPTHHHAMHQHQHAMHHHSMHQQQHHQHSTLLSHHHHMHHPNLQHQQQQQPQSASAATAQQHGPSSTALLSQLVNSTFSTAPPTSSSSSSCSSSTSSSLRTDALLQSHHHPHHHHHAAQQSSQSAGPPPPPPMPPNHHLHQPHLGADAHYKSSADNSNNNNHELSSACSTPYGQHGGEQRDRDRDEHHSALNGPPLPPKSSSSSSLLLEDNNNTLCGTPAGANAPSAAAMAAAAAMAAQQAPHPHLPPGYLHALPFQFQDRGHFRFADDLQLPPGASMAGRLGESLIPKSDPMEAKLQEMLRYNMDKYANQALDTLHISRRIRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDAGLPPYGGREDSMSDDRLAHILNEASSMIKNTTPGSLQQQLKEAEQRQLQQQEQHRRSAHDDSQMSNEDSKSPHPLSTSPFYKSSSQLKQEQEAAAAAAAAAAQQQQHRLRQEQELTPDKMARIYQEFLMRTPRETAFPGLLLSPFFNAAGGMPSGCGLPNMMGAGSGSGTAAADDNLRLAYEREMAKLQQQHQQNAAAAAAAGNLPNFPNFSNLMALQQQVLNGAQDLTLLKDPKDAIKVNGQRSNIEHSSNSMDSQSCNSNSNAPTSLSSSMPNANSNNNNAKDLPSNADANAERHGNANMSLHQRKLDGSGSHTPVPPPPTSNAAMHGANGNSTAPSPLSNSILPPAMTPTDDFATNASPLQRMASITNSLITQPPIPPHHTPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGTFSGTPQIPQGLANKMSASLPMQKMMNELKLQEPTQAQHIMQQMQAAAMSAAMQQHQQQQAQSQQHAAAAAAQAAAAAQAAHHQSMLLTSPGLPPQHAISLPPTGAAVGNGGPGTPGSEKKPMMMPIHSPHQANAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNNSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHNQPIGADNPIPSRENTNSTPFDPVQFRILLQQRLLELHKERMGLSGAPALPYPPYFAAAALLGRSLAGMPGAAAAAAAAAAGAGAGGEPDLHALNQAFREQMRGLDLSMSSLKRERNDDLEDDLDESHLSDNESLDGGDNKSLGGGEYKDDADSTPSSTPLSSAASYLMGGLAAHMRSSRRKPAAPQWVNPAGPITMGADAKGMVAAATAPGGGIIPPNAEQEHVINGVCVMQPSSAEFSCSEGGDGDTANTSNDGGDMESANKNVADMSAAHDIAVEQRFMEPEMRIKQEREDCDSDDDNATSTASASASLTATTSTREEKLKVVSEDKLRMVRVQRQSHEDDDAAAAASCAPATTNANAAMPPTAAAVSAASAWSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01505268;
- 90% Identity
- iTF_01505268;
- 80% Identity
- iTF_01505268;