Ucar035922.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- Kdm5
- Assembly
- GCA_960531455.1
- Location
- OY482674.1:77526462-77528936[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-27 3.4e-23 83.2 0.1 2 89 210 293 209 293 0.95
Sequence Information
- Coding Sequence
- ATGTCGGCAAAAATTTGTACATCGGATTCAGCGGGTATATCTACATCAACGGATGATATTGGCAATATAACACCAGCTAGGCGTTTACGTACACGCAATTCTACTGGAGGCTATGTGAGCGGCTCTGAATCGGGAAAAAAATCTAACAACAATTTAAATGTGTCGGAATCAATTAAAAATAGTATATATCATGACACTGTTAAATTATCTACAAACAATGCCCTATGCGAAGGAAAGCAAAGTACGAGCAGCAGCTCCGTTACAAATATAGCAATAGGATCGGGTAAAAAGTACCATAACAGTTGCCCGCATCCTACAAACGATCGCACGCGGGCTAAACCATTTATGCATTTGCAACCTCACAGCTCAAGTACATTCAACTTAATTAAAACAGAAGAGTTTAATTTTGATACACCAGTTGAGTGTCCGGTTTTTCGTCCAACGCAGGATGAGTTCAAGAATCCTTTAGCTTATATTAGTAAGATTAGGCCAATTGCAGAAAAATGTGGTATTGCAAAAATTTTACCACCTGAGTCGTGGTCACCACCATTTGCTGTAGATGTAGATAAACTAAAATTTACGCCACGAGTGCAACGACTTAATGAATTGGAAGCAAAAACCAGAGTCAAACTCAATTTCTTAGACCAAATCGCAAAATTTTGGGAACTTCAAGGTTCTTCACTGAAAATACCAATGGTGGAGCGCAAAGCATTGGATTTATATACTCTTCATCGTATTGTTCAGGAGGAAGGCGGTATGGAACAAACAACGAAGGAGCGCAAATGGGCAAAAATTGCTAATCGTATGTCCTATCCTTCGAGTAAAAGCGTTGGTGCAACCTTAAAAGCACACTATGAGCGCATACTTCATCCGTTTGAAGTTTATACATCTGGAAAAGTTTTAGGATCTGGTACATCAACATGCAGTGCAGTGGACGCTGTAAAACTTGAAGATGGCACAGATTACACGGCTCATGAAATACCAACACGTCAACAAATTGCACCACCAAACGAAAATGCTCGACGCTCTAAACGATTTGCTAATTCAAGTGCAAATTGCGGATTAAGCGGTGCTTCACGAAAAAACTTTAAGGTCGATGTAAAGGAAGAACTTAAACGTGATCTTTTACATTCCTTTAATGTCGCTAGTGCTTCAACATCAATATCTGGAGTACGTGGCTTAAGTAGTGGTACTGCTTCACTTAATTTAACAAATCCAAAGAGAGCTCCTGATCCGCTTATAGTTGACCCTTTAATGAAATATATTTGCCACATATGTAATCGAGGGGACGTGGAAGAGTCCATGCTATTATGTGACGGATGTGATGACAGTTATCATACTTTTTGCTTGCTGCCCCCATTATCCAGCATTCCCAAAGTATTAGCGGGCAGCGAAGTGCCCTAA
- Protein Sequence
- MSAKICTSDSAGISTSTDDIGNITPARRLRTRNSTGGYVSGSESGKKSNNNLNVSESIKNSIYHDTVKLSTNNALCEGKQSTSSSSVTNIAIGSGKKYHNSCPHPTNDRTRAKPFMHLQPHSSSTFNLIKTEEFNFDTPVECPVFRPTQDEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKIANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGSGTSTCSAVDAVKLEDGTDYTAHEIPTRQQIAPPNENARRSKRFANSSANCGLSGASRKNFKVDVKEELKRDLLHSFNVASASTSISGVRGLSSGTASLNLTNPKRAPDPLIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKVLAGSEVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -