Ucar003338.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- TFCP2
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:55412865-55436546[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-17 4.7e-13 50.3 0.1 24 76 151 201 133 206 0.81 2 2 0.71 1.1e+04 -3.3 0.0 143 156 230 243 228 248 0.77
Sequence Information
- Coding Sequence
- ATGCCAACGGTTGAGTCATTTTTGTCGTTTTCACCGGCCTTGACAGTACTGAAGCAGGAACCACAAACTGACCAGATAAAGGCTATTAAAAGTTCATTAGATACTCAAACTACGTTTGGTTGCAGCAGGGGAAGTGTAGAAAAGCTGGATAAGGCAACTTCCCATATAGATATAGCGCCACCTGCCGAGGAAAATTCAAGAAATCCTTTGAAGTCTTCAATCTGTGGTTGTGGTTCACCTAAAACAGGTGCACTACAAGAAATTGAACACAGTAGGAATTATATTGAGAAGTCCAATACCAATGAAGGCAATGGATTCGGCAATGCTGTAACAAATTATGGTGGTGACAAATGCACTGCATATGAAAACATAACCTCTCAGCAATTGGCCATAACCGATGTGGGAAATGTTGAAAACAGTATCAGAGGTAGTGCGGTTACTAACAATGTTCAGTTCGACGATCATAAGTTTCAATACATTTTAGCAGCAGCCACCTCCATTGCAACCAAAAATAACGAGGAGACGCTCACATACCTGAATCAAGGGCAAAGCTACGAAATAAAGCTGAAGAAAGTCGGAGATTTATCTTTCTATCGTGATAAGATATTAAAGCACTTTCGGCCCTCACCACATAAGGGATCGGCGGCATATGATTGCCACAACGTTGGCCAATCTGTGGGTGAGCCAACGTGGAATACCAATAACGATGTGAAAATGAAAATGGCAATGGAACAACCAAGCACCCGGATTATCGGCACTGTATCCTTCAACGCCGGCTTGAGTAATGACGCTCCAATAAGCCACGCCGATCCAAATCCAATGCTTGTTCCAAATTCATACGTCGATGCGGATCGTTTCTATCCCTCAGTAAACGCCTGTCTACTTTTCGGGAATTTTCTGCGGCGCTTGTAG
- Protein Sequence
- MPTVESFLSFSPALTVLKQEPQTDQIKAIKSSLDTQTTFGCSRGSVEKLDKATSHIDIAPPAEENSRNPLKSSICGCGSPKTGALQEIEHSRNYIEKSNTNEGNGFGNAVTNYGGDKCTAYENITSQQLAITDVGNVENSIRGSAVTNNVQFDDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKVGDLSFYRDKILKHFRPSPHKGSAAYDCHNVGQSVGEPTWNTNNDVKMKMAMEQPSTRIIGTVSFNAGLSNDAPISHADPNPMLVPNSYVDADRFYPSVNACLLFGNFLRRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -