Ucar005608.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- slbo_1
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:88968422-88969768[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.4 1.6e+04 -2.7 0.1 26 42 95 111 92 112 0.74 2 3 3.5 6.8e+03 -1.5 0.2 27 41 197 211 192 212 0.83 3 3 1.9e-13 3.8e-10 41.0 12.7 3 65 363 425 361 425 0.96
Sequence Information
- Coding Sequence
- ATGCTGAATATGGAGACGACGCAGATGTACGACACTGTGCAGTCTCTCTCCCAGTTGGATCTCAAGAAACAGCCTCAGCAGGCGGTAATCGGTCAAATCACTTTGACTGCAATGTCCAGTGCTCAACAGCAACATCAGCAGCAAAGTAACACAAACACAAACGACAATAATAATGGAACAGATTCCAACAtgaacaacaataataataatgtggGAAGCTTAACAGCTGCTGCCACTGTAGTTGCACAGCAACAGAATGTTGGCCTAGTGGTCAAGCAACATGCAGTTCATCAAATGCAGCAAGCAGCTGCTGCGCTCAATAATAATAACAGTACCTCAACGATCAATGCGAATGTGAATAACGTCAATAAtctattacaaaaacaaatgctTCAACAATACTCCCAATCTGATCTGGATGAGTTTACCGCGCAAGAGATTACATTGGATCTACAACATTTGATCGACGATCAGTTTCGTGAGCAGGATAATCTCGGCATTTTCAATGATATGGTGACAAGCCCCGGAGGTTTATCAGCCACTCTACCGCCTAGTGGAATGGTTAGCGCGGCAGCAAAAGTATTTCATCAACATCAACTACAACAGCAATCATTGCGCACTCAACAACAAAACTACGGTCGCAGCGCATTGGCTTATATGCCACAAGCTGTGCACTCTGGTGCAGCTTACAGTAATAATTCAAGTGATGAAAATTCCTCTATCGGTTCAGATACATCGACATCAACTATCAAAGAGGAACCCATTGATCCAGAATATCGTCGACATTTGCAAGACACTAATGCAAATAATACAGCTGCTACTGCTTTCATCACGAATGGCAGTGCGAACGGACTATACAATCCATACCAAACGGTGGCAAATAATGTTCAAGTGAATAATGGTGGCATGGGAAACGCAGCTGGCGGCACAGCAAACAATTTTACAACGCTCACCTCGGCAAGTGTGTTGGCGCATCACTCCGTGAACCTACCGCATCTGACAGCAGGCGCCCATCTTCTCAAGCATCATAACAAACAATTACATAACCAACGAAAATCTTCACTTAAAAATGTAGACAAAGGAAGCGATGAGTATCGTCGCAGACGAGAGCGCAACAATATAGCAGTACGAAAATCGCGTGAAAAAGCGAAGGTGCGCTCACGTGAGGTTGAGGAGCGCGTCAAAACTTTGCTCAAAGAGAAGGAAGCACTTTTGCGCCAACTACAAGAAATGAACAACGAAATTCAACTACACAAGCAAATCTACATGCAACTCATGAATCATGCAAACCCAGAAGTGAGTCGAGTGTGTCGGAGCTTTTTAAATACCAACGATCATGGGCTGTAG
- Protein Sequence
- MLNMETTQMYDTVQSLSQLDLKKQPQQAVIGQITLTAMSSAQQQHQQQSNTNTNDNNNGTDSNMNNNNNNVGSLTAAATVVAQQQNVGLVVKQHAVHQMQQAAAALNNNNSTSTINANVNNVNNLLQKQMLQQYSQSDLDEFTAQEITLDLQHLIDDQFREQDNLGIFNDMVTSPGGLSATLPPSGMVSAAAKVFHQHQLQQQSLRTQQQNYGRSALAYMPQAVHSGAAYSNNSSDENSSIGSDTSTSTIKEEPIDPEYRRHLQDTNANNTAATAFITNGSANGLYNPYQTVANNVQVNNGGMGNAAGGTANNFTTLTSASVLAHHSVNLPHLTAGAHLLKHHNKQLHNQRKSSLKNVDKGSDEYRRRRERNNIAVRKSREKAKVRSREVEERVKTLLKEKEALLRQLQEMNNEIQLHKQIYMQLMNHANPEVSRVCRSFLNTNDHGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -