Ucar006116.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- XBP1
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:97159905-97181331[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-14 1.1e-10 42.7 12.2 2 52 71 121 71 122 0.96 2 2 1e-05 0.02 16.2 8.0 25 64 108 147 107 148 0.94
Sequence Information
- Coding Sequence
- ATGGCGGAAACAAAGCCAGCCGTTTTTATAACTGTGCCCAAATTTGTGGCCATAACGCCAAATCCGAATGCAAATACAGCGTTAGCGAAAATAAGGCCCTCACCGAGTACGTCTATGCAAGGTGCCACAACGGCCGTTGATCAAAATATGTGGATTGGTGACAGTGTTGCAGCCCGAGGAAAAAAACGTCGTCTAGATCATTTGACATGGGAAGAAAAAATACAGCGCAAAAAATTGAAAAACCGTGTAGCAGCTCAAACGTCTCGTGATCGTAAAAAGGCACGCATGGAAGAGATGGAAAGGGAAATTGATGAGCTAAATCAAAAAACGGAAATATTGCAGAATAAATGTGAGAGTTTGCAAACCATTAACGAATCACTTCTGGAAAAGAATCAGAAACTTGATAATGAAGTCGAACTTTTGCGCCAGCAACTTATAGaagtacaacaacaacaagaacagctATCTAGCAATGCGGCTTGTTTAAAATCTAAGAAAACAGTTAGTACTTGTGCCGGCTCAGGGATCAATTCAAATGGACTCTCAGTCGACAGAAGAACAATTGAAAAAGAGAAACTCACAAGCAGCCCTTTGGAGGATTATAGCACTTTGCCTACTCTTCAAGATATACTCTTCGCCGACCAAGAACTCGATGCCAGCAAACTTGAAGAGCTTGCCGAAAGCCTCCTGGCTGATATCGCAGAAGACTTGGAAGACAGTAATGGAGCGTGCAATAAAAATGATGCCAAAATTACAAGCTGCTCAGAGCGATTGTCTGGATCAGTGGTGGGGACCAAAGCAGAATGCTTGGAATCCAGCCATCATACAAACGCCCGAACTAATTGCATAGATAACACCAATGATGTATCTCCATCACACGTTACAGATGATGGTATTCGATTACAAAATAAATTACCTGCAGAGATATCAGAAGCGAATAAGATTCATAAAAGCACCACCGCATCTGTCACTGTATCGAAGACATGCGATAAAGAACAAGACATTATTAATACTTCTTTCGACCCAGATACTGTGTATGGTACTTATGATGCTAAAACTAATTCCATAACGATTGTATTGGATGATGATGTAGTACCGGTAAATGAAGCTGTAGAAGAAATATATTGTGATGGTATAAAACCACCAACAAATGATGAAATTCTATGCCCTTCATCAGCCACATCACCATCGCATGTATTCCTTAATGTTGTCGATGATTCCGATGATGATATTGAAGACTTTGATCCAATTGAACGTTTTCTGCGGCCCAAACGTCCTCTAATAAAATCTCCCGCCCCATCGCTACATTCAGCCATCTCAGATCATGGCTACGAATCAATTATTGGTTCGCCCACATCAACAGTTACCGAACAATTTGATACATGTACTGAAGATTTTGGCTGGCCAGAAAATTTCAATGATTTATTTCCAAATTTGATTTAA
- Protein Sequence
- MAETKPAVFITVPKFVAITPNPNANTALAKIRPSPSTSMQGATTAVDQNMWIGDSVAARGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEEMEREIDELNQKTEILQNKCESLQTINESLLEKNQKLDNEVELLRQQLIEVQQQQEQLSSNAACLKSKKTVSTCAGSGINSNGLSVDRRTIEKEKLTSSPLEDYSTLPTLQDILFADQELDASKLEELAESLLADIAEDLEDSNGACNKNDAKITSCSERLSGSVVGTKAECLESSHHTNARTNCIDNTNDVSPSHVTDDGIRLQNKLPAEISEANKIHKSTTASVTVSKTCDKEQDIINTSFDPDTVYGTYDAKTNSITIVLDDDVVPVNEAVEEIYCDGIKPPTNDEILCPSSATSPSHVFLNVVDDSDDDIEDFDPIERFLRPKRPLIKSPAPSLHSAISDHGYESIIGSPTSTVTEQFDTCTEDFGWPENFNDLFPNLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -