Ucar008773.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- Jra
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:159574200-159575289[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 8.1e+03 -1.7 0.4 10 18 67 75 60 78 0.82 2 2 4.7e-18 9.2e-15 55.7 7.9 2 65 230 293 229 293 0.96
Sequence Information
- Coding Sequence
- ATGAAAACTACTATTAGCGCAACAGCAACAACCAATACAGCTGGTTCGATTAGCAATAGCAGCATCACTCACCCCTCCACCGAGGTTACTGTCTTACCCAAAACTGAGACGAGTGATTTAAATTTAACATTTCAAACACCAAACTCAACGGCAATTGGTAGCAGCTCCAACAATTCAAATAAGCGACCGGCATCGTTGGATCTTAACAAAGTGGCGGCGGCTAAAAAGCAACGACTAGTGGCACCATCGCCACTCAACATCGATTCGCCCAATTTGGAGAATTTGAAGACGATAAACACGCCGGATATAGAGAAAATGTTGCTGAGCAATGTAATGCCGACGCCACAACCTGGCGTAATCTTTCCCAGCAAAACGAGTACCGTTACTTCCGAGCAGGAAGCGTATGTGAAAGGCTTCGAAGAGGCCTTAAGTAATTTGCATCAAAGCAAGAAATCTCAAGCGGCACAAataaccaacaacaacaacaccggCAGCAGTGTTAGTGCAAATGTGGTGACCACAGTGCCTTCCACGAATACCAACACTGCAACTGTTGTTGGCACTGGCATTAGTGGCGGCTCGTTTACGTACACCAATTTGGAAACCTTCCCCGTCGCTATCAAAGATGAACCACAAAACCCCGCATCACCGGCAGCACTCAGTCCCATTGATATGGAAACACAAGAGAAAATCAAATTGGAACGTAAAAGGCAACGTAATCGTGTGGCAGCATCAAAATGTCGCAAACGTAAACTGGAGCGCATATCAAAATTGGAAGACAAAGTTAAAATACTTAAGGGCGAAAATTCCGAGTTGGGCTCAGTGGTTAAAAGTTTGAAGGATCATGTAGCCCAACTGAAAGAGCAAGTGATGGATCACATCAATTCGGGCTGCACAATTTCTATGTTAACCGAACAACCAATGTTGGCCGGCAAATAA
- Protein Sequence
- MKTTISATATTNTAGSISNSSITHPSTEVTVLPKTETSDLNLTFQTPNSTAIGSSSNNSNKRPASLDLNKVAAAKKQRLVAPSPLNIDSPNLENLKTINTPDIEKMLLSNVMPTPQPGVIFPSKTSTVTSEQEAYVKGFEEALSNLHQSKKSQAAQITNNNNTGSSVSANVVTTVPSTNTNTATVVGTGISGGSFTYTNLETFPVAIKDEPQNPASPAALSPIDMETQEKIKLERKRQRNRVAASKCRKRKLERISKLEDKVKILKGENSELGSVVKSLKDHVAQLKEQVMDHINSGCTISMLTEQPMLAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01562505;
- 90% Identity
- -
- 80% Identity
- -