Ucar012116.1
Basic Information
- Insect
- Uropetala carovei
- Gene Symbol
- grn
- Assembly
- GCA_036926305.1
- Location
- JAXCHB010000017.1:4904123-4912947[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-18 2.3e-14 55.3 6.5 1 34 312 344 312 346 0.97 2 2 0.17 2.3e+03 0.9 0.1 18 26 747 755 746 759 0.80
Sequence Information
- Coding Sequence
- ATGTCCTTGTCAGCTGGAGGTGAACCACTCCCGTCAGTTCCCGGAACCAAAGCGAAGGAGGCAAAAGCACCACTCGCCGCCCCGATTGTTTTATGGAAAGGagggtttttttcctccttccttacCGACGAAACGGTTGTTACGTCACGGACGAGCAACGGGAGCcgcatctttctctctctcaacttcTCCCTCTCCACCGATCATAAATACGTAAAATGTGTCGCTTCTCCCATACGTGATGGTCACACCTGCGCGGGGCGTGGGCAACATAATGTCCAGTCGTTAAcacttttccttccttcccctttccgCACTCCTCCCTATCTATTCCCtgtacctcctctctctctctctctctctctctctctctctctctctctctctctctctccaccttcctcCCTTCACTTCCCCTTAGCTTCTCTTTATATTCCCTCCTCCGTCATTGACACGCATGCGGGCGCCCGGCAACCGTCCTTCCTCCGCGATCCTTCGGACGCTCAGCTAGTGTGTACAGGACGTCACCCAACGAAACAGCCGATGCGCCAGGAGGAAGAGAATGGGGGGGTGGGAGGGCGGGGtgcggaaggaggaggaggcggtcGGTGGGTGGACGAGGGTGTGGGCGCGTTTTATTTTGGAAGGCGAAGAGGATGCCAAGCGAATTCCCTCCCGTTGTCGTCAGAGGGCCCACCGCTTCGTCAATGTCCAAACGCCTCGCGGCCATTGTTCTTCGAggtagggagaggaggaaaggataCTCTTAGTTCTTCTCTCGTGGCTTCGTGCAATGACCTGAGTTgccgccccctcctccccctcctctttcctcttctcctccaccccctccctctcccctttttaTTTCCATGCGGCGCTTCCCCCCTCCTGTCATCGCTGCAGTCTGCCGCCCGCAGAGCAGGCACGAGCTGCGCCAATTGCAAGACGACCACTACGACCCTGTGGCGAAGGAACCAGAACGGAGAGCCAGTTTGCAACGCATGCGGCCTCTACTACAAGCTCCACAATATATTGCTTTTAGAAGAAACATTTACGGAAAAGTTTATATCGCTTCACTTTCATTCCCCTTCTCATTCGAATTGTTTCTCCCCAATCATGCACTTCCTCCATTTCCTCGCACCAGCTCTCTTTTCCTATTCCACGAATCTTCCTCAAACATCGGGATCAATCCTTGGACATCGTCCAAATGAGCCGACCCCCTCTCGCCATTCCATTTTAACAATCTCATCCCCATCCTTTCCATCTACCACGAAATCCGGATCTCGTCCACGCCCATCCCACACTCCTATCGCCCGACACTCGAGCTAttctcctcccccacccacctctCCCACTCCACCTCCCCCACTGTTACCTCCCCAAGTCCCTTTCCACTCGTCTCGCCGCTCTTCTTTTATCGTTTCCTCCCGGTCGTGGCTGACTGACCGGAAGAGGAGGCATTTAGCGCGCGCTGCTTCCGTTCGGTGCCCCCTTCTCATCTCTTCGTCCCGATCCTCGCACCTCACTCCCAATCCCCTTCCAACCCTCTCCAAATGGACGGAGATGgaccctctcgctctctcactcctctatataaatctctctcctctcgctctcttCAAATTTCCCCGTATTCTTTGTCGCATTTGCTGTCTTTCGTCCCCTCCTCCCGTTATACCAACCCTCCTCTCCTTTATCCAcatccccctctctttttctctcccaacctccccctctcctcgcCCCTTGATCCGCTTTTGTCCGTCTTCTTTGCCGCGTAGGCCGCCTTTCTCAGACTTGGCAAGGCGAAGGGGGAGGGTGTGTGCACGAGGGAAGGAGGCTAAGGAAGGGAGGatgggagtggaggagggggaaggaaataGGCGGCTGGGTAGTCTTCAGAGGGAAGGTCTGAGTCTCATGGAATTTAACGGgcggatggagagagggggagagaaggaaagagggagtcGGGTCCTTCGTTGTGTCCGCTTAGCATCTCACCGACACGCCCTCCCAACTCCATCCTCGCCTCCCACGCCACCCCCTCTTTCCTTCAGCCCTTTCTTTCTCGTCGCAGAAGTGCTCCACTGTATCCTAGGAAGCCGCGCGAAGATTACAAGGGACTCTTCCTCTGTATCTCGTGATGGCCGTTCAAACACGCGTCCGATGGAATCTGGTAGGGCAGTTCCTTCACCGCCCCATCGCTTCCCTTATCCCCTCATCCTCCTCACCGGTGCAATCCCTTTGTGCAATCGATGCGTCTACGGTTACCTCATGGGACAGAATCCTCTTTGCACTACGCCTCTTAacatcctctctttccccttcccgtCCCATTTACCAAAGGAAATAGGCGGCATcgctcactctcctctctctcccttaacgacccaccccctctcccccctgcCCTATGACCCACTCCGCTTCCATTGTGCTCCCCTCCCTCTGCATCCCCCTTgtatcccctctcctccctctttctatgGGACTCTAAAAACgacaacatttttaaaaagcttGAAAAAGCCGCCCCACTTTTGTCGCACTCCGCCCTCTCCAAACTTCTCATTCCGCTCTCCCCCCTCTCGTCTTTTCCCCTCCAGCTGCTCAGAGGGAGACAAATGGGAAGAAACTTATTCATCACCCTTGGCGTGGAGGGCGAGAAAAGTGGCTTTTATACTCTCTTCGGGAACCTCTTTTCCTCCCACTGTTCCAACAGTTTCCACTCCATTTCTGTTTctcttccatttccctccctcctctccctgtCGCCTTCCTCAATTTGTTCCCACCACCTCTCCCTCCACACTATCCCCTTTGAACTTCCGCTCCTTCtactcccctcctcttctccaccAAGAGTACCATCTCTTTCCTCTACAATttcttcccccttttctcctGCTCAATCGCTCGCTTTGTCCACTCCCTCTGCTCGCCGCCGGGGTTTCTTCCTCTTTTCGAGCCTCGCTGTCCGCCACgccccatcggcacggcccacGAGAACTTCCTCGGTAA
- Protein Sequence
- MSLSAGGEPLPSVPGTKAKEAKAPLAAPIVLWKGGFFSSFLTDETVVTSRTSNGSRIFLSLNFSLSTDHKYVKCVASPIRDGHTCAGRGQHNVQSLTLFLPSPFRTPPYLFPVPPLSLSLSLSLSLSLSLSPPSSLHFPLASLYIPSSVIDTHAGARQPSFLRDPSDAQLVCTGRHPTKQPMRQEEENGGVGGRGAEGGGGGRWVDEGVGAFYFGRRRGCQANSLPLSSEGPPLRQCPNASRPLFFEVGRGGKDTLSSSLVASCNDLSCRPLLPLLFPLLLHPLPLPFLFPCGASPLLSSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNILLLEETFTEKFISLHFHSPSHSNCFSPIMHFLHFLAPALFSYSTNLPQTSGSILGHRPNEPTPSRHSILTISSPSFPSTTKSGSRPRPSHTPIARHSSYSPPPPTSPTPPPPLLPPQVPFHSSRRSSFIVSSRSWLTDRKRRHLARAASVRCPLLISSSRSSHLTPNPLPTLSKWTEMDPLALSLLYINLSPLALFKFPRILCRICCLSSPPPVIPTLLSFIHIPLSFSLPTSPSPRPLIRFCPSSLPRRPPFSDLARRRGRVCARGKEAKEGRMGVEEGEGNRRLGSLQREGLSLMEFNGRMERGGEKERGSRVLRCVRLASHRHALPTPSSPPTPPPLSFSPFFLVAEVLHCILGSRAKITRDSSSVSRDGRSNTRPMESGRAVPSPPHRFPYPLILLTGAIPLCNRCVYGYLMGQNPLCTTPLNILSFPFPSHLPKEIGGIAHSPLSPLTTHPLSPLPYDPLRFHCAPLPLHPPCIPSPPSFYGTLKTTTFLKSLKKPPHFCRTPPSPNFSFRSPPSRLFPSSCSEGDKWEETYSSPLAWRARKVAFILSSGTSFPPTVPTVSTPFLFLFHFPPSSPCRLPQFVPTTSPSTLSPLNFRSFYSPPLLHQEYHLFPLQFLPPFLLLNRSLCPLPLLAAGVSSSFRASLSATPHRHGPRELPR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -