Basic Information

Gene Symbol
St18
Assembly
GCA_036926305.1
Location
JAXCHB010000226.1:1311025-1312343[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4 3.4e+04 -2.3 0.0 25 29 200 204 197 204 0.74
2 3 5 1.2e+05 -7.0 3.8 18 26 219 227 217 227 0.50
3 3 5.1e-15 1.2e-10 43.8 1.2 1 23 302 324 302 326 0.93

Sequence Information

Coding Sequence
ATGCCTGGCGTCATTCAGCGAGCCAGGAATTCTTGGCGCAACAGGGCTCAGTTGTGCATTGACTGCAATGGTGGACAGCTTGAACATCTTTTGGAATTGGCAGATCGGTTTGCGCGTGACGGCTCCGAATCGACCCAGCCTCTCACGCCCTCTCCCTACCACCCCCAGCAGCAATCCCTCCCTCACGACACGCCACAGCAAGACAAGCACAAACTCATATACTCGACCAATCCAACCCCTCCGCCAACACCCGTCAGCAACGGCTACCTACAACAAAACAGGGCGAggaccctctcctcctcctcggaGTCCTCCTTCGTTTCCGACGGGAGGACAGGCCCCGCGTGTCCCGCCAggccctccccccctccctcccccttgcaGGCATCCCCTGACGGGGGACACgtcaagagggagggaggttcgAACCGTTCCCCTCGCAGGGACGTCTCTCCCCCTAAGATACCAGGCGGGATAAGTATCAGTCTGACGTCGTGCAGACCCGAAGAGAACCTCTCCGGTTTCTCCCGGATAATAAACACTAAGCAGAAGGATCCCAGGGACGGGAACGCTTGCGAGGAGGCGAAACGGACGTTGAACTGTCCCAGATCCCCGAACGGGTCCCCAGTACAGGAATACGCCCCTCCCAGACACCACCACCACCAGCAGGTCCACCAATGTATCCCTTCCGAGGACCCCCAACGGCGAGGTTACTTACCGCCGTACTGCCCTCCCCCTCAGAGGGGGCAGTACGGCGACGACGCCCGCCTTCACCAACAAGTAGACAAGATACCTCTCCTgcctccgcctcctccccctcctcccctgcACCAAGGAGCGCCACAACACACCCTACCCACAATACAGCACCCTCCGAGAGGTAGAGACGGGAAGGAGCTTATTCAATGCCCCACTGCTGGTTGCGACGGAATGGGCCACGTTTCTGGGAACTACGCGACACACAGAAGGCAAGCTAGACAAGGAACGGTTTTTTGTTCCTGTATATGA
Protein Sequence
MPGVIQRARNSWRNRAQLCIDCNGGQLEHLLELADRFARDGSESTQPLTPSPYHPQQQSLPHDTPQQDKHKLIYSTNPTPPPTPVSNGYLQQNRARTLSSSSESSFVSDGRTGPACPARPSPPPSPLQASPDGGHVKREGGSNRSPRRDVSPPKIPGGISISLTSCRPEENLSGFSRIINTKQKDPRDGNACEEAKRTLNCPRSPNGSPVQEYAPPRHHHHQQVHQCIPSEDPQRRGYLPPYCPPPQRGQYGDDARLHQQVDKIPLLPPPPPPPPLHQGAPQHTLPTIQHPPRGRDGKELIQCPTAGCDGMGHVSGNYATHRRQARQGTVFCSCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-