Basic Information

Insect: Uropetala carovei
Gene Symbol: Zfpm1
Assembly: GCA_036926305.1
Location: JAXCHB010000035.1:16737759-16740128[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7 4e+03 1.3 3.6 1 23 115 138 115 138 0.95

2 14 8e-06 0.0045 20.0 0.5 1 23 219 242 219 242 0.94

3 14 0.00024 0.14 15.3 0.7 1 23 247 270 247 270 0.98

4 14 4.9e-06 0.0028 20.6 3.6 2 23 273 294 272 294 0.97

5 14 1e-05 0.0058 19.6 1.0 1 23 300 322 300 322 0.99

6 14 7.2e-06 0.0041 20.1 6.3 1 23 328 350 328 351 0.96

7 14 0.47 2.7e+02 4.9 3.2 5 23 364 382 363 382 0.97

8 14 0.00048 0.27 14.4 2.8 2 23 388 410 387 410 0.96

9 14 0.0038 2.2 11.5 0.2 2 23 426 446 425 446 0.97

10 14 1.6e-05 0.0092 19.0 0.1 1 20 452 471 452 474 0.94

11 14 0.0073 4.1 10.6 1.0 1 23 482 504 482 504 0.99

12 14 0.0032 1.8 11.8 4.6 1 23 510 532 510 532 0.97

13 14 2e-05 0.011 18.7 6.7 1 23 538 560 538 560 0.98

14 14 3.3e-06 0.0019 21.2 2.2 1 23 566 588 566 589 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7	4e+03	1.3	3.6	1	23	115	138	115	138	0.95
2	14	8e-06	0.0045	20.0	0.5	1	23	219	242	219	242	0.94
3	14	0.00024	0.14	15.3	0.7	1	23	247	270	247	270	0.98
4	14	4.9e-06	0.0028	20.6	3.6	2	23	273	294	272	294	0.97
5	14	1e-05	0.0058	19.6	1.0	1	23	300	322	300	322	0.99
6	14	7.2e-06	0.0041	20.1	6.3	1	23	328	350	328	351	0.96
7	14	0.47	2.7e+02	4.9	3.2	5	23	364	382	363	382	0.97
8	14	0.00048	0.27	14.4	2.8	2	23	388	410	387	410	0.96
9	14	0.0038	2.2	11.5	0.2	2	23	426	446	425	446	0.97
10	14	1.6e-05	0.0092	19.0	0.1	1	20	452	471	452	474	0.94
11	14	0.0073	4.1	10.6	1.0	1	23	482	504	482	504	0.99
12	14	0.0032	1.8	11.8	4.6	1	23	510	532	510	532	0.97
13	14	2e-05	0.011	18.7	6.7	1	23	538	560	538	560	0.98
14	14	3.3e-06	0.0019	21.2	2.2	1	23	566	588	566	589	0.96

Sequence Information

Coding Sequence: ATGGCAATATTTCTCACTTGTCAGAATTGCAGCAAAAAAGAGCTGTTTTCTGGTTCTTATGGTGCTTCCCACCATGGCATGACTCCCTGCAAACAACAAGCTTATAGTCAGCTTTTTCCAGCTTCAGCTCGTCAAGGAGCTGCCCAGTGCGACTTAATGCCAGGAAGTGGTGAAGCATGGCCAGCTGTGGATCCATATAAAGGAAAGCAAGAAGGTGAGGTTGGTGGGGTGGTTTCTGAGCCGACGACAAAAAAGAGACAACGTGCCAAGAAGAATGCTGGAAGTGGAGGTGCTTCCAAGGCCGATGGAGATGGTGCTCCTAAGACAAAGACCAAACGTTTGTACCACTGCTGGACCTGTTTAGAGGTGTTCAACTGCCCGAAGGAGAGGAGAGTTCACCAACGGGAGAGACACAGTGGGGAGAAAGGGGTGACAGTGACACCATCGGTGGAAACTACCATGCAACCTGCCACGACATGTGAACAAGAAGGTTTGGATGCTGGAGTCGAAAGTTCAAAGGTCAAGGCTGAGTTGAGAGAGTCCATGTTAGAGCCGAAGCAAATGGTCGAGGTCCAGATGAAGGAAAGCAAGGTTGCCATTAAAATCCAGGAAGATGGTGGAGAACTGGAGAATGCTGCAGCTGCAAAATGTTCCCATGCCTGCTCTGACTGTGACAGGTCTTTCCCCTCCCTGCGTTCCCTAACTGCACACCGTAGAGCCGCTCACCGTGATTCACGTTTTAAATGCCCAACTTGCTCGGAGAAATTCCTAACGTCTGCGGACTTTACGAATCACGTACGGACAGTGCATCCTTTGGAATGTTCCTTGTGTGGCAAACAGTTCTGCAGGCAGCAGAATCTACGCCTTCACCTCAAGAGGCACATGAGCGTACGTCCATACAAGTGTACGCAGTGTGACAAGGCCTTTGTTACGAATCAAAAGATGGAGGAACATCTCAATTCCCACACGGGACGCACCCCTTTCCAGTGTCCACTGTGTCCGAGAGCTTTCCGTCGCCACAGCAATCTCATACAGCACCGCAAGCACCACCACATGAAAGTTAAGCGCAAGGTTAGGGATTTCTTCTGTCACTGCGGAGCTGTGTTCCACTCCACAAAAAAGTTAGAGTGGCACAAGGAGACGCACGAGGACAAACCCAAAACTTGTCCTCACTGCAGCGATCGCTTTGTTCACAAGGCAGGTCTGACACGACACATCAGGCAGGTGCACGACAGGCGTTACGTGCCATCCGGTGCTCGGGAGGATGTCAACGTCGAGTGTCCTGTCTGCTCTGCTGTCTACCTCAAGTCATCTCTCCATATCCACATGAGGGTTCACTCAGGAGAGCGTCCCTTCTCTTGCGGGATCTGCGGAAAAGGATTCGCCACCAAGTGGAACCTTCAGCTCCATCGTTGGGTTCACGCGAGTCCTCACTCGAAACCCTTCAAGTGCGCTACGTGCAAGGCGGCGTACCACAGGCGTGTGGACTATGTGGCGCATGTCCGTTCCCACAGAAAAGTTAGACCATTTGTTTGTAACACGTGCGGTCGCCGCTTCATGAGAAAATACAACTGTGTACGCCATTCCCGCGAGCATGAGACAGGCAAGGCGTTTGAGTGTTCGATTTGTCACAAGCGTTTTCACAGGAGATATTACCTTAAGGAGCACCTAAGAATCCACACAGGCCTTAGACCTTATGTGTGCCATGTCTGTGGCAAAGCCTCGGGCACCAAATCTAACATGAATAAGCACGTGCGCATACACCATGCAAGGGAGCCCGTAAACACAGAGGGTTAA
Protein Sequence: MAIFLTCQNCSKKELFSGSYGASHHGMTPCKQQAYSQLFPASARQGAAQCDLMPGSGEAWPAVDPYKGKQEGEVGGVVSEPTTKKRQRAKKNAGSGGASKADGDGAPKTKTKRLYHCWTCLEVFNCPKERRVHQRERHSGEKGVTVTPSVETTMQPATTCEQEGLDAGVESSKVKAELRESMLEPKQMVEVQMKESKVAIKIQEDGGELENAAAAKCSHACSDCDRSFPSLRSLTAHRRAAHRDSRFKCPTCSEKFLTSADFTNHVRTVHPLECSLCGKQFCRQQNLRLHLKRHMSVRPYKCTQCDKAFVTNQKMEEHLNSHTGRTPFQCPLCPRAFRRHSNLIQHRKHHHMKVKRKVRDFFCHCGAVFHSTKKLEWHKETHEDKPKTCPHCSDRFVHKAGLTRHIRQVHDRRYVPSGAREDVNVECPVCSAVYLKSSLHIHMRVHSGERPFSCGICGKGFATKWNLQLHRWVHASPHSKPFKCATCKAAYHRRVDYVAHVRSHRKVRPFVCNTCGRRFMRKYNCVRHSREHETGKAFECSICHKRFHRRYYLKEHLRIHTGLRPYVCHVCGKASGTKSNMNKHVRIHHAREPVNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00261377;
90% Identity: iTF_01402254;
80% Identity: -