Ucar093747.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Uropetala carovei
Gene Symbol
-
Assembly
GCA_036926305.1
Location
JAXCHB010000209.1:2082564-2095667[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.67 3.8e+02 4.5 0.5 1 23 247 270 247 270 0.95
2 13 0.65 3.7e+02 4.5 0.1 1 22 275 296 275 298 0.82
3 13 0.25 1.4e+02 5.8 0.1 1 23 317 340 317 340 0.92
4 13 3.8e-05 0.022 17.8 0.9 1 23 345 367 345 367 0.98
5 13 3.7e-06 0.0021 21.0 2.7 1 23 373 395 373 395 0.99
6 13 1.1 6.3e+02 3.8 8.9 1 23 402 424 402 424 0.95
7 13 6.7e-07 0.00038 23.4 0.0 1 23 430 452 430 452 0.97
8 13 9.6e-06 0.0055 19.7 0.1 1 23 458 480 458 480 0.99
9 13 4.8e-07 0.00027 23.8 0.6 1 23 486 509 486 509 0.96
10 13 4.5e-05 0.026 17.6 0.7 1 23 515 538 515 538 0.95
11 13 1.1e-06 0.00062 22.7 1.1 1 23 544 566 544 566 0.99
12 13 5.9e-05 0.034 17.2 0.3 1 23 572 594 572 594 0.97
13 13 0.0038 2.2 11.5 0.1 1 23 600 624 600 624 0.92

Sequence Information

Coding Sequence
ATGACTGCAGACACTGAACAGCAGTTGAATACTGCCCCTAGAAGTACTAAGTGTTTTATTTGTAATGCTAGGGTGGGATCCTCTGTAAGAAgtagttataattttttccaatcCGAAACAGTTACATCATCACAAAAGCAGGTGTACTTTTGTATAGCTTCTATTTTAGAGTGCGAGCTTCTTGAAGAGTCGGTTCATAGCCAggtaatttgtaaaaaatgttaTCGGGCTATCAATGAAATAGATGATCTGGAATGCCGAGCTGCCGAGTTAAAGAACGAAATTTGTCAAAAGTATCAACAAACTTCTCAAAATCGAGGCGAAGATCTCATCGATACATCAAAAGACTTGTCTCATTCTGGGGCTAATTATGAAGACAAGAACGATGAGGATTATTTGGGGAAAAAGGTGCAAAAAGTCCGCAAAAAAGctcctccaaaaaaaattaagtatgtCAACCCTTTAAGCAAAAAGAAGGAACTGATTCAAAAGAAAAGCGAGTCCTGCCAAGAGACTTCGGAGTCGTACTCCACAGTAAATGATACAATAGAGACAAATGAAAAAGATAAGTTAGAATTAAGTGCTCCAGAGTTCTGCGAAACTGGAGAAGATATGAAAGCCGATGAAACTGAGGAGGAAAGGCCAGATattaaagaggaagaagaaggggagaaggaagTTACAGAAGTTTCCAGTGCAGCTGATGGTACAAATGTAGTCTTAAAGGAAGGGGATTTTTTCAAGTGCGTGCCTTGTAATCAAAAGCTTCAAACAGCTACTTCGGTTCAAAGTCATCTGAGACGTGTGCATGGAGTGCGGGCATTTGTGTGCATTTTATGTGGTCAAGAGTTTGATCGTAAGAAAGATTTAGGATTTCACATGGCGGAAGACCACGGAGAATCCCCAAATTTGGATGGGAGTTTAAAGAAAGAGGACGAAGGAGTCCTTTTTCTGTGCGAATTTTGTCCAGAAGCTGTTGGTAGTTTGAAAGAGCTTCGTGATCATAAAAAGGAAGTTCATGGTAAGGCGAGGCACAAGTGTGAAGTATGTGGAAAGTTTTATGGATCTCGCAATCTTCTCCTGGAACACATGAATGTTCATAATGGAGTCCGACCTTACAAGTGTGACTTGTGTGACAAGACCTTTGCTTCCAGATACTGCCTCAAAGTCCATGTGAAGATTCACGATGCCAGGCCGAGGCCTCATGCTTGCCATGAATGTGGTAAGACCTTCCTGTGCCTTCAGCATCTTCAGCAGCATTCTAGAACACACTCTGAAAACAAAGATTTTGTTTGTGAAACATGCGGAAAGGCATTTGCAACTGCTCGTAATTTGGAGGTTCATATGGTGGTGCATTCAGGAGCCAAGCCGTTCACATGCAGCGTTTGCGAAAAAGGGTTTGCAAGAAGAGCAGAGCTTGTAGACCACGAGCGGACGCATACGGGCGAGAAGCCATTCCAGTGTGAGACGTGTGGTGCCACTTTCAGTCAGAGGAGTAACCTAATATCACATCGTCGCGCAACACACTTGGACGATCGACGCTTCACTTGTGATGATTGTGGTCGAGGTTTCAAACGCCGTCGTCTTCTAGACTATCATCGGAAGGCTGCTCATACAGGTGAAAGACCTTATACTTGTGAGACATGTGGCGCCTCTTTTGTCTATCCTGAGCACTACAAGAAGCACATTCGCGTTCACACAGGTGAACGGCCTTATCCCTGTGAGGTTTGCGGCAAGCGATTTGGCTCAAGAGACAACCGAAATGCACACCGCTTTGTGCATAGTGATAAGAAACCTTATGAGTGTGTGGTTTGTGGAATGGGATTCATGCGTAAGCCATTACTCTATGGTCACATGCAGTCACAAGGCCACTTGCAAGATGCAATAGTAATTAATCAGCCTCGAATCACAAGCGTATTTGAAGAGAGGCAGAGCAATGGAATGGATACTGAAGGAGAAACTGGTGAAGGTGAATCAAATAGTCAAGAGACAACAAGATCTCAGCCGCGAGtTTTGAAGAGAGTAGCGTTTGAGTTACCAGACAAAAGATTAGGTAACAAGAGTCTGAGCATCCTGGAAAGTGATGAAGTGGACTTGGTGAAAGCGATAGAAACAACCCATGAAGATCATGTTTACACTATTTCATCAAAAGACCATATCATTCTTCGACAGGCTGATGATAGAGACCAAAGGCTccaaggagaagaggaagaagttgaACACTTGATAATTGAGGGTCCAGTGCATTTCACTGAAGAAACTGAAATAACTGCTTTACAGGGAGTGACGTCTGCATCAGAAGGTCGCTATCAGAGCATGGTTGTTGACAGTGCAGGTCTAGCAGAAAAAGGAACCCGAGTGGTGGCCTTATGTAGTTCAAATACTGTTTCTTCTACTGCTCCTCTGTCGGCAGTCCAGTCTGCTTTAGCTTCTTCATCTGGGATTAGTCAGGAACATATGTCATCCACAGTGGTTGTGCGCCAGAACGAACCTCCAGTGCATCTAGTTCAGATTAGAATCCCATCAGGTGATGACTCTGGTAGGGCATGGATCAATTTGGTCAACCAACAGTGA
Protein Sequence
MTADTEQQLNTAPRSTKCFICNARVGSSVRSSYNFFQSETVTSSQKQVYFCIASILECELLEESVHSQVICKKCYRAINEIDDLECRAAELKNEICQKYQQTSQNRGEDLIDTSKDLSHSGANYEDKNDEDYLGKKVQKVRKKAPPKKIKYVNPLSKKKELIQKKSESCQETSESYSTVNDTIETNEKDKLELSAPEFCETGEDMKADETEEERPDIKEEEEGEKEVTEVSSAADGTNVVLKEGDFFKCVPCNQKLQTATSVQSHLRRVHGVRAFVCILCGQEFDRKKDLGFHMAEDHGESPNLDGSLKKEDEGVLFLCEFCPEAVGSLKELRDHKKEVHGKARHKCEVCGKFYGSRNLLLEHMNVHNGVRPYKCDLCDKTFASRYCLKVHVKIHDARPRPHACHECGKTFLCLQHLQQHSRTHSENKDFVCETCGKAFATARNLEVHMVVHSGAKPFTCSVCEKGFARRAELVDHERTHTGEKPFQCETCGATFSQRSNLISHRRATHLDDRRFTCDDCGRGFKRRRLLDYHRKAAHTGERPYTCETCGASFVYPEHYKKHIRVHTGERPYPCEVCGKRFGSRDNRNAHRFVHSDKKPYECVVCGMGFMRKPLLYGHMQSQGHLQDAIVINQPRITSVFEERQSNGMDTEGETGEGESNSQETTRSQPRVLKRVAFELPDKRLGNKSLSILESDEVDLVKAIETTHEDHVYTISSKDHIILRQADDRDQRLQGEEEEVEHLIIEGPVHFTEETEITALQGVTSASEGRYQSMVVDSAGLAEKGTRVVALCSSNTVSSTAPLSAVQSALASSSGISQEHMSSTVVVRQNEPPVHLVQIRIPSGDDSGRAWINLVNQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01385051;
90% Identity
-
80% Identity
-