Basic Information

Insect: Uropetala carovei
Gene Symbol: -
Assembly: GCA_036926305.1
Location: JAXCHB010000235.1:3612364-3617212[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.1e-07 0.00018 24.4 0.8 1 23 173 195 173 195 0.98

2 11 1.2e-06 0.00071 22.5 1.6 1 23 201 224 201 224 0.97

3 11 8.6e-07 0.00049 23.0 4.9 1 23 233 255 233 255 0.98

4 11 2.8e-06 0.0016 21.4 2.3 3 23 263 283 262 283 0.99

5 11 1.8e-06 0.001 22.0 0.1 1 20 289 308 289 310 0.94

6 11 1e-06 0.00058 22.8 1.8 1 23 328 350 328 350 0.97

7 11 3.3e-06 0.0019 21.2 2.9 1 23 356 378 356 378 0.98

8 11 4.4e-07 0.00025 23.9 0.5 1 23 424 446 424 446 0.98

9 11 1.3e-06 0.00071 22.5 0.8 1 23 452 474 452 474 0.95

10 11 5.1e-06 0.0029 20.6 2.8 1 23 480 500 480 500 0.98

11 11 4.1e-06 0.0023 20.9 2.8 1 23 506 528 506 529 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.1e-07	0.00018	24.4	0.8	1	23	173	195	173	195	0.98
2	11	1.2e-06	0.00071	22.5	1.6	1	23	201	224	201	224	0.97
3	11	8.6e-07	0.00049	23.0	4.9	1	23	233	255	233	255	0.98
4	11	2.8e-06	0.0016	21.4	2.3	3	23	263	283	262	283	0.99
5	11	1.8e-06	0.001	22.0	0.1	1	20	289	308	289	310	0.94
6	11	1e-06	0.00058	22.8	1.8	1	23	328	350	328	350	0.97
7	11	3.3e-06	0.0019	21.2	2.9	1	23	356	378	356	378	0.98
8	11	4.4e-07	0.00025	23.9	0.5	1	23	424	446	424	446	0.98
9	11	1.3e-06	0.00071	22.5	0.8	1	23	452	474	452	474	0.95
10	11	5.1e-06	0.0029	20.6	2.8	1	23	480	500	480	500	0.98
11	11	4.1e-06	0.0023	20.9	2.8	1	23	506	528	506	529	0.96

Sequence Information

Coding Sequence: ATGGTAAGCCCGTGTAATCAGGACAATTTTCACAATGGAAAGCAGTGTGATCATGATTTTCAGCAGCAACTCCCTTCAAATGCTAGCCATCATATGGTAGGGTCTCAGTTCTATCAACATCCTAGTTGCATTCAGAGCTGCGACGGAGTCAAAGGTAACAGCAGATCTTGCAATGAAGATAGTGCAGATTGTGAAATCTTGGATTCAGTAAATGGGAAGGACATTGATGTATTAGAGAGTGAAGATAGCTGTAGTCAAGAATCCCTTAGTATTGCTGAGGAGGATGACATTATTGTAGAAGAAGAAGTTGAGGAACCTAAGAAGAGGCATTCGAATTTGAATGAAGACAAGGAAAAGAATGAAGTAGAAAGAAATGAACCAAAGAGGATTGAGGAAGCGAAAGAAGTAGTTAAGACTCATTCAAATCAGGAGATAGAATCACCGcctcttgaaaaaattgacAAAGGGGAAGGAGAAGTCATTCCAGCGAAAGAAGAAGGAATAGtggataaaaaatttgaatgtgaTGTGTGTGACACAAAGTTTTCCAGAAAAGAATCCCTGGTTAAACATATGCAGTTACATACTGGTGATTTCACATATAGATGTGAGCACTGCAAAAAGGGATTTTCACGTCGTGGAGCTTTAGCTCGTCATTTGATAAGCAGACACAGTGATGGCCATGATCGACATCTCTTCCAGTGTGAACAATGTGGAAAGCGATTCACCCAGGAGCATCATTTGCGGGTACATCTTCAGTCCCATAGAGGAGAATTGCCTCATGGTTGTGAGCACTGTGGGAAGGGATTTGCAAGTAGGCATTCCCTATCCATCCACATACGAACACATACTGGCGAGAAACCATTCCCCTGCAATAGCTGTGGCAGGCCTTTTACTACTCACTCGAATCTGAAAGCCCACATTGCTGTCTGTCCCAAAAATAATGCAGCAAAAGAAGCAAAACTTCCAAAGCCATTATGCCACTATTGTGAGTACTGCAAGAAAGGTTTTGTCAAACCATCAGACCTTAGGGTTCATCTCAGATCTCACACTGGAGAGAAACCATTTGTTTGTGAACGATGTGGTAAACGTTTCTGCAATTCTGGTAACTACAATCAACATGCTCGCTCTCACTGCAACGCAGCATCGCCAATCGAAGACGAGGAACGGGTAACCAAAATTAAAGCAGCTGATGAAGCGGCAGAAATTTTGGAGGATGAAGAATTGTCTGTGAATGAATTAAAAGTAAAGGTGGAAAAGTCACGCCCTTTTAAATGCAAAGTTTGTGGAAAGGGTTTCTCTCGCAAAGGGGCATTGAGCGTGCATGAAAATCGTCATGAAGGTGTTAAGCCATTTGCTTGCAATGTTTGTGGAAAAGCTTTCCCCGATCGCAGTAATTTGCACAATCATAAATTGCTTCACTCGACGGTCAAGCCTCATCAGTGCAATGTTTGTGGGAAGTCATTTCGTTCGAGTCTAAAGGTTCATATGAGAACTCATACAGGGGAAAAACCATATTCCTGCTCTCTGTGTGACCAAAGGTTTGTGGTCAATAGCTCCTTGACATCCCACATGAAGAAGCATCATAAGTCGGATGCTAATAAAGCTCTATCATCGTAA
Protein Sequence: MVSPCNQDNFHNGKQCDHDFQQQLPSNASHHMVGSQFYQHPSCIQSCDGVKGNSRSCNEDSADCEILDSVNGKDIDVLESEDSCSQESLSIAEEDDIIVEEEVEEPKKRHSNLNEDKEKNEVERNEPKRIEEAKEVVKTHSNQEIESPPLEKIDKGEGEVIPAKEEGIVDKKFECDVCDTKFSRKESLVKHMQLHTGDFTYRCEHCKKGFSRRGALARHLISRHSDGHDRHLFQCEQCGKRFTQEHHLRVHLQSHRGELPHGCEHCGKGFASRHSLSIHIRTHTGEKPFPCNSCGRPFTTHSNLKAHIAVCPKNNAAKEAKLPKPLCHYCEYCKKGFVKPSDLRVHLRSHTGEKPFVCERCGKRFCNSGNYNQHARSHCNAASPIEDEERVTKIKAADEAAEILEDEELSVNELKVKVEKSRPFKCKVCGKGFSRKGALSVHENRHEGVKPFACNVCGKAFPDRSNLHNHKLLHSTVKPHQCNVCGKSFRSSLKVHMRTHTGEKPYSCSLCDQRFVVNSSLTSHMKKHHKSDANKALSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -