Basic Information

Insect: Uropetala carovei
Gene Symbol: -
Assembly: GCA_036926305.1
Location: JAXCHB010000340.1:822334-835190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.7e-06 0.0021 21.0 1.0 1 23 140 162 140 162 0.97

2 18 0.012 6.9 9.9 2.5 1 20 168 187 168 190 0.92

3 18 9.2e-05 0.052 16.6 0.9 1 23 196 218 196 218 0.98

4 18 1.4e-05 0.0078 19.2 3.7 1 21 224 244 224 246 0.95

5 18 1.3e-05 0.0073 19.3 4.6 1 23 252 274 252 274 0.99

6 18 1.3e-05 0.0073 19.3 5.3 1 23 280 302 280 302 0.97

7 18 8.5e-07 0.00048 23.0 5.4 1 23 308 330 308 330 0.96

8 18 4.8e-08 2.7e-05 27.0 2.7 1 23 336 358 336 358 0.98

9 18 3.5e-05 0.02 17.9 6.7 1 23 364 386 364 386 0.97

10 18 9.3e-06 0.0053 19.8 4.6 1 23 392 414 392 414 0.97

11 18 2.9e-07 0.00016 24.5 2.9 1 23 420 442 420 442 0.98

12 18 5.4e-06 0.0031 20.5 8.0 1 23 448 470 448 470 0.98

13 18 5.3e-06 0.003 20.5 8.1 1 23 476 498 476 498 0.98

14 18 2.5e-07 0.00014 24.7 7.7 1 23 504 526 504 526 0.98

15 18 0.00051 0.29 14.3 8.8 1 21 532 552 532 554 0.94

16 18 4.6e-05 0.026 17.6 0.4 1 23 560 582 560 582 0.98

17 18 0.007 3.9 10.7 3.9 1 23 588 610 588 610 0.98

18 18 7.6e-08 4.3e-05 26.3 0.5 1 23 616 638 616 638 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.7e-06	0.0021	21.0	1.0	1	23	140	162	140	162	0.97
2	18	0.012	6.9	9.9	2.5	1	20	168	187	168	190	0.92
3	18	9.2e-05	0.052	16.6	0.9	1	23	196	218	196	218	0.98
4	18	1.4e-05	0.0078	19.2	3.7	1	21	224	244	224	246	0.95
5	18	1.3e-05	0.0073	19.3	4.6	1	23	252	274	252	274	0.99
6	18	1.3e-05	0.0073	19.3	5.3	1	23	280	302	280	302	0.97
7	18	8.5e-07	0.00048	23.0	5.4	1	23	308	330	308	330	0.96
8	18	4.8e-08	2.7e-05	27.0	2.7	1	23	336	358	336	358	0.98
9	18	3.5e-05	0.02	17.9	6.7	1	23	364	386	364	386	0.97
10	18	9.3e-06	0.0053	19.8	4.6	1	23	392	414	392	414	0.97
11	18	2.9e-07	0.00016	24.5	2.9	1	23	420	442	420	442	0.98
12	18	5.4e-06	0.0031	20.5	8.0	1	23	448	470	448	470	0.98
13	18	5.3e-06	0.003	20.5	8.1	1	23	476	498	476	498	0.98
14	18	2.5e-07	0.00014	24.7	7.7	1	23	504	526	504	526	0.98
15	18	0.00051	0.29	14.3	8.8	1	21	532	552	532	554	0.94
16	18	4.6e-05	0.026	17.6	0.4	1	23	560	582	560	582	0.98
17	18	0.007	3.9	10.7	3.9	1	23	588	610	588	610	0.98
18	18	7.6e-08	4.3e-05	26.3	0.5	1	23	616	638	616	638	0.99

Sequence Information

Coding Sequence: ATGAGGGGAGtccactgggtcctcaactggccTGAAGCAGCCCAAATGGGAAAGGCATCGGATAAATCCCCTATGCCCGAGACCAGTCTTACCCGGCCCATGGGCCGGGCCGGGTTCCCTGGGCAGGATATTAAGGGACATGTAACAGCTGAAGGACTAGTAAAAGCTGGGGTTGTTGGTGACCAAGAATTGGCCAAAAATCTTGGAGTTGAAATGGTGCAAAACATGTATAAGGTGAATGTGGATGATATAAATCAGTTACTGGCATATCATGAGGTGTTTGGGAAACTACAAAATGAAATGGCGTTAAATGCAAATCCAGCCCTAGCGTGTCAGACTAAACCAGCAGAAGGCACTGGTAATGCTAATACTACCACTACCACTACCAGTGCTGCTGCAGTAGTTGCTACTGGCACTCACGTATGTGACATATGTGGGAAAATATTCCCATTTCGCTACCAACTTATTGTCCACCGCAGGTACCACACAGAAAAGAAACCTTTCACTTGCCAAGTGTGTGGAAAAGCTTTTGCATGCAATGCTGAATTGGCACGCCATGGCAAATGTCACCTAGGCGGTAGCCTTTATACCTGTGGAGTATGTTTTCATGTTTTTGCCAGTGCCAGTGGGCTGGAACGCCATTCCAAGCGCCATGCTGGTGACAAACCATATGTTTGCACCGTATGTGGTAAGTCTTTTGCCCGAAAGGAGCACTTGGACAACCACACCCGATGCCACACTGGGGAGACGCCATATCGTTGCCAGTACTGTGCAAAGACCTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGAAAGCACACTGGTGAGACTCCCCATCGTTGTGACATTTGTAAGAAATCATTCACACGCAAAGAGCACTTCATGAATCATGTCATGTGGCATACAGGTGAAACCCCCCATGCTTGCCAGATGTGTGGAAAGAAGTACACCCGGAAGGAGCACCTGAACAACCACATGCGGAGCCACACCAACGACACTCCCTTCCGCTGCGAGATCTGTGGCAAGTCCTTCACCAGGAAGGAGCACTTCACGAACCATATAATGTGGCACACCGGAGAGACGCCCCACCGCTGCGACTTCTGCTCCAAGACCTTCACCCGCAAGGAGCACCTGCTGAACCACGTACGCCAACATACGGGTGAGTCTCCCCACCGCTGTGGCTACTGCGCCAAGTCCTTCACTCGCAAGGAGCATCTCATCAATCATGTACGCCAACACACAGGCGAGACCCCCTTCCGGTGCCAGTACTGCCCCAAGGCGTTCACCCGCAAGGACCACCTGGTGAACCACGTGCGCCAGCATACGGGAGAGTCTCCTCACAAGTGCCAGTACTGCACCAAGACCTTCACCCGGAAGGAGCATCTCACCAACCACGTCCGTCAACATACGGGTGAGTCCCCCCATCGCTGCCACTACTGCTCCAAGACTTTCACACGCAAGGAACACCTTGTGAATCACGTTCGCATCCACACAGGCGAGTCCCCTCATCGCTGCGAGTACTGCAACAAGACGTTCACACGCAAGGAGCACCTGACGAACCACATGCGCCAGCACACAGGCGAGACCCCTCACTGCTGCAATGTCTGCTCCAAGCCGTTCACACGAAAGGAGCACCTCATCAACCACATGCGCTGCCATTCTGGGGAGCGCCCGTTCAGCTGCGGGGAGTGTGGCAAGTCGTTCCCCCTCAAGGGCAACCTGCTCTTCCACCAGAGGTCGCACTCTCGGGAGCGCCCTTACAACTGCGACGTCTGTGGCAAGGACTTTATGTGCAAGGGCCATCTAGTGAGTCACAAGCGCAGCCATTCAGGCGATCGTCCCTATAGTTGTGGGGATTGCGGGAAGTCCTTTGTCGAAAAAGGCAACATGCTTCGTCACATGCGAAAGCATACAGAAAACAATATTTCGATCCCTGCTGCCAATGGTGTGCTGGCTACTTATTGA
Protein Sequence: MRGVHWVLNWPEAAQMGKASDKSPMPETSLTRPMGRAGFPGQDIKGHVTAEGLVKAGVVGDQELAKNLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQNEMALNANPALACQTKPAEGTGNANTTTTTTSAAAVVATGTHVCDICGKIFPFRYQLIVHRRYHTEKKPFTCQVCGKAFACNAELARHGKCHLGGSLYTCGVCFHVFASASGLERHSKRHAGDKPYVCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHACQMCGKKYTRKEHLNNHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCAKSFTRKEHLINHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKTFTRKEHLTNHVRQHTGESPHRCHYCSKTFTRKEHLVNHVRIHTGESPHRCEYCNKTFTRKEHLTNHMRQHTGETPHCCNVCSKPFTRKEHLINHMRCHSGERPFSCGECGKSFPLKGNLLFHQRSHSRERPYNCDVCGKDFMCKGHLVSHKRSHSGDRPYSCGDCGKSFVEKGNMLRHMRKHTENNISIPAANGVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00307085; iTF_01402237;
90% Identity: iTF_01131696;
80% Identity: -