Basic Information

Gene Symbol
NCOR1
Assembly
GCA_036926305.1
Location
JAXCHB010000045.1:3803334-3813757[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-13 6.1e-09 38.5 0.2 3 46 351 395 349 395 0.97

Sequence Information

Coding Sequence
AtgaacggacagacggacgggcgGTGGTGCGTCTCccaccccctttcccccctccgcATCTTTCGGAAGCATACAGACGAGCCTAAAAGCCCCTTGGGCTACGCGGCCTTTCCACCCCCAGGGAGAGTATCGGAAACCGCCGCCAGTGGTGATTCGGAACGATCGGAAAGAGTATATGTACCCAAAGGgctgtctatctctctctctctctctctccatccctccctccctccctccccttcccgcACTTTATACCCACTCCCCCTTCCaggtacatattttaacatatcggcctctctcttcctctcatcccTACCCATCTCAGTCCGTCGTGGATATCCGTCAGTACAGGCTACCTCCCGTCCTTCACGTCTAATTGTTTGTGCACCTGATGAAAGTATCAATTATTCAAGCGGACTagtgggggaggagaagagagggagggagaactcttcctccccttcccactcCAGACTCTCATCCCACCCTCATCCCCAAGGGTGCCCATATACCACAACGTTACCTGAGCTATTGTGTGCTTTCAAAACGAGCCTTGTGTATTTAGTTGTTTGGCTGAgatatcctcctctctccttcctcggCGAAAAAGGAGGCCCCCATCCATGTGTGGTTTGTAAAGCAACAGTGGAGCAGTTTCTCCTTTCGAGACCCCTACCCCGCTCCCATGCTGCACAGTATGGTCTACGAGATGAGGATGTACCTCCTGGAGCACGGGTCTGCAACTCCTGCCGCTGCAAGTCCGTCCGCAGTCGTTACACTCAGTGCCCAATTCCCACATGTCCCACAGCCAAGGGCAGGGCTAAACGCTTGCGGCCCCTGCCAGGGAAGTGGGCTGACCTGCCTCCAGAGGTCAAGGAACCTATTATTGCAGAATTCCAAATTCCTGTGCAAGTGACGAAATGTTGCTCTGCATGTTTCAACCGCATATCCCGTCGATTGTCCCCAAATGATGGTGCTGCAGAGGATGGTTCTAGTAGTTCTTCAGCAGCAGTTGCTGCTGCCACTGCTGCAGCTGCAGCTGACCAGTCAAGGTGGACGGATGAAGAGATTGAGCTGGCAAGAAGAGCTCTAGGAGAATTTGGAATGGGCCACTGGGTCAAAATTTCAGAACGTGTGGTCACAAAATCAGAGCACCAGTGCAAGAACTTTTACTTCAACTATCGTAAAAAGCTTGGCTTGGATGCCATCATCAGAGAATATAATGAGGCACATTTAGGAGAAGAGGGTCGCAGCAAGGGTGGGGGCGATGGTGCTCCTCCCACAGTCACAGATGAGGAAGAGTCTGGATCGAGTACATCGAGTTGCGATGAGGCAGGAATAGCCCCAGACAGTAGTGACACTGCCAGTGCTGCCTCCCCTAACCCTCCTCCGCCTGCCTCTACCACCCCAACAGCCGAAAGTAGAGGGAGGAATGACCGAATGGCTGGGAAGAGTTCAGAAGCTATGGAAACGGATGCAGAAAAGTCAGTTTTACatgtagaggaagagagaatgtCAACCCAGAGTCCACAATCTTTGGAGCAACAGAGACAAAATGTTGGAATGTCAATGCCCGGAGTATCTGCTGCACCTCCATCCACCAAGGAGGACTATGACAGCTCAGCCACAGAGACAGCAGATGAAGGTCAGGGAGGTTCTGAAGTTGATGGGGCTGGGGCAAGGGGGTCACCTAAGAACTATGCAGCTATCCAACAGGTGCCACAGCCATCACAGAATCGCACTCCTGATCAACAGCAGAGAAGCCATGGGGTAGTTTCAGAGGCTAATGGTGCTGGAGAacgtgagagggagagagagggtagcaGTGAAGGGCATACACAGGAACTCCTTACTGTGAAGGACTTGATGCTGGGAGTTATTGAGATGCAGCTCAAGAAAAACCCCCAGGGAACTCACCAACAAGCATTGCATCATTCAGGATCTCATATGCAGACTGCTGTGCCCCAAAGTCAGCACCAGCCATCTCCTACCATCTCGTCCATTCTCAAGACAAATGACCGGCCAGATATTGCTTTTGTGAGAGAGTATCGAGACAACAAAAGCAGTTCTACTGTTAACAGAATTGGACAGCAAGGACAAGTGGAAGTAACTCAGCAGCACCCACCCAACTCACGGAGGCCTGGATCTTCGCAAGAGGTTGGGGCCTCGCTGCAACAGAGAGGAAGAACGCCTCCTGTGCAGCCTGCTGATAACCATCGATCACTTCCTCACTCGCAGATGTCCGtgcttcctccccctcctcaccaCAATCACCATCTATGTCCCATGACTTTACCTGGAGGAGCAGGAACCATGATGGTGCCAGCACCTGCAGGGAGACCTGATTTGCCTAAGGAGGGCCTTGTTGTTGTTCAGTTGCAGCAAGTACAGCATGCCTTGAGGGAAAGTGGTCGGGAACCTGAGGCAGTTACTCTTGACTTGAGTCTAAAGAAGAGGGATGAAAGTCCTCCAACTGGTCCACCTGTGAGCCAAAGTGCACGTGATGCTCATCCCCATCATTCCCTCCATCATCCTCCTCCAGCCCACTCGAAGCCACCTCCATTGCGCCTGCCGGAGGTGATGATCCGAGAGATTCCTCCACCAGTGGTTTACAGGGacactccctctccctactATCATCTGCATCATCAGCAGCCAATTACAGCTCCACCCCCTCCAGAGCAGGCTCGCAACAAGTCACCCTCAGTCTATGTGCCAGATGGTCGTGCACCTCATCTTGTGATGAGCCCTGTCAGCAGGCAAACCACTTTGCCTCCATCTGCACAGATAACAACTGCAAATGCCACACCAAAGGCACCAAAGGTAAGCCAAAGAAATAGCCTTTTATGTCATCAATTGTGGCATATAAGTAGACCTTGA
Protein Sequence
MNGQTDGRWCVSHPLSPLRIFRKHTDEPKSPLGYAAFPPPGRVSETAASGDSERSERVYVPKGLSISLSLSLHPSLPPSPSRTLYPLPLPGTYFNISASLFLSSLPISVRRGYPSVQATSRPSRLIVCAPDESINYSSGLVGEEKRGRENSSSPSHSRLSSHPHPQGCPYTTTLPELLCAFKTSLVYLVVWLRYPPLSFLGEKGGPHPCVVCKATVEQFLLSRPLPRSHAAQYGLRDEDVPPGARVCNSCRCKSVRSRYTQCPIPTCPTAKGRAKRLRPLPGKWADLPPEVKEPIIAEFQIPVQVTKCCSACFNRISRRLSPNDGAAEDGSSSSSAAVAAATAAAAADQSRWTDEEIELARRALGEFGMGHWVKISERVVTKSEHQCKNFYFNYRKKLGLDAIIREYNEAHLGEEGRSKGGGDGAPPTVTDEEESGSSTSSCDEAGIAPDSSDTASAASPNPPPPASTTPTAESRGRNDRMAGKSSEAMETDAEKSVLHVEEERMSTQSPQSLEQQRQNVGMSMPGVSAAPPSTKEDYDSSATETADEGQGGSEVDGAGARGSPKNYAAIQQVPQPSQNRTPDQQQRSHGVVSEANGAGEREREREGSSEGHTQELLTVKDLMLGVIEMQLKKNPQGTHQQALHHSGSHMQTAVPQSQHQPSPTISSILKTNDRPDIAFVREYRDNKSSSTVNRIGQQGQVEVTQQHPPNSRRPGSSQEVGASLQQRGRTPPVQPADNHRSLPHSQMSVLPPPPHHNHHLCPMTLPGGAGTMMVPAPAGRPDLPKEGLVVVQLQQVQHALRESGREPEAVTLDLSLKKRDESPPTGPPVSQSARDAHPHHSLHHPPPAHSKPPPLRLPEVMIREIPPPVVYRDTPSPYYHLHHQQPITAPPPPEQARNKSPSVYVPDGRAPHLVMSPVSRQTTLPPSAQITTANATPKAPKVSQRNSLLCHQLWHISRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01402087;
90% Identity
-
80% Identity
-