Ucar065081.1
Basic Information
- Insect
- Uropetala carovei
- Gene Symbol
- -
- Assembly
- GCA_036926305.1
- Location
- JAXCHB010000127.1:1731488-1732081[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 2.9e-09 39.2 0.0 5 37 1 33 1 39 0.91
Sequence Information
- Coding Sequence
- ATGAAGTTGGCGCTGAATGCTGTATTATCGGACAAACTGAGTGTCAGGGAAGCAGCACGACGGTTTGATGTCCCAAAAAGTTCTTTGCAAGATAGGATTTCCAAAATaaagaaaggagaagaaacTAGGCTACCACCAAAATTAGGAAGATTTGAAGTAACGTTTATTGAAACCCACGAAAAGGATTTACTCGCTCACATCAAACAGTTGGACAACATGTTAATGCCTCTGACTAAAAAGGAGTTCCTGAAATTGGCATTCGATTTCGCCGAAGAGCTTAGACTTCCGCACAGATTTAATAGAAATAAGAAACTTGCCGGCAAAGACTTTTATTATGACTTCTTGAAGAGGCATCCCGTACTGGCATTAAGGAAACCGGAATCAACAAGCATGATGCGAGCAGTGGGCTTCAACAAGTCTCAGGTGGCCCTCTTCTTCACGAAACTTGGTCAGTTAATGGAGAAGCATTCATTTCCTCCTTCACGCATGTTTAATTCTGATGAAACTGGCATATCCTCTGTACACGAAAACAGCAAAGTAATTTCTGTGAAGGGCAAACGAGAAGTGGGCAAGCTCACATCAGGGGAAAGATGA
- Protein Sequence
- MKLALNAVLSDKLSVREAARRFDVPKSSLQDRISKIKKGEETRLPPKLGRFEVTFIETHEKDLLAHIKQLDNMLMPLTKKEFLKLAFDFAEELRLPHRFNRNKKLAGKDFYYDFLKRHPVLALRKPESTSMMRAVGFNKSQVALFFTKLGQLMEKHSFPPSRMFNSDETGISSVHENSKVISVKGKREVGKLTSGER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01504621; iTF_01504600;
- 90% Identity
- iTF_01504621; iTF_01504600;
- 80% Identity
- -