Basic Information

Insect: Udea olivalis
Gene Symbol: B0310.2
Assembly: GCA_947369235.1
Location: OX376367.1:2285249-2313168[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.8 79 4.8 0.5 1 23 386 408 386 408 0.86

2 11 0.036 3.6 9.0 0.9 1 23 415 438 415 438 0.93

3 11 0.38 38 5.8 0.2 1 23 442 464 442 464 0.92

4 11 0.0042 0.42 11.9 1.0 1 23 469 492 469 492 0.98

5 11 0.0013 0.13 13.5 0.7 1 23 496 519 496 519 0.97

6 11 3.8 3.8e+02 2.6 0.9 3 21 533 551 532 552 0.85

7 11 0.096 9.6 7.7 0.2 2 23 609 631 608 631 0.96

8 11 0.0094 0.94 10.8 0.5 2 20 647 665 646 668 0.92

9 11 1.9e-05 0.0019 19.3 2.5 1 23 674 696 674 696 0.99

10 11 0.00012 0.012 16.8 1.2 1 23 703 725 703 725 0.98

11 11 0.00011 0.011 16.9 2.2 1 23 731 754 731 754 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.8	79	4.8	0.5	1	23	386	408	386	408	0.86
2	11	0.036	3.6	9.0	0.9	1	23	415	438	415	438	0.93
3	11	0.38	38	5.8	0.2	1	23	442	464	442	464	0.92
4	11	0.0042	0.42	11.9	1.0	1	23	469	492	469	492	0.98
5	11	0.0013	0.13	13.5	0.7	1	23	496	519	496	519	0.97
6	11	3.8	3.8e+02	2.6	0.9	3	21	533	551	532	552	0.85
7	11	0.096	9.6	7.7	0.2	2	23	609	631	608	631	0.96
8	11	0.0094	0.94	10.8	0.5	2	20	647	665	646	668	0.92
9	11	1.9e-05	0.0019	19.3	2.5	1	23	674	696	674	696	0.99
10	11	0.00012	0.012	16.8	1.2	1	23	703	725	703	725	0.98
11	11	0.00011	0.011	16.9	2.2	1	23	731	754	731	754	0.93

Sequence Information

Coding Sequence: ATGCGGTGCTGTGTGCCTCACTGTTCTAATGACACTAAACGGAGAACAAAAACCCAAGGAATTACTTTTCACATGATACCCCGCGAGCGGAATCTCCGTCAATCATGGTTGGAGGCTCTTGGCATGCCTGTGTGGGAGCCCAAGGACCGCAGTACCGTATGTTCAGAGCATTTCAGGAACGAGGACTTCTACGAGACCAAATGTGGTCTCAGAAAGATAAAAAGCGGCGCGATACCAGTTTTGGGCCTTTGTTCAGATGATTTAGATGCACCTGCTGGTTCACGGGTATGCCGAATATGTATGACTACAAACATGAAGATGTATGATACCAGAGAATATCAACTTGGGATAGTATACCAGCAAATAACTGGAATAGAATGGAGTGAAAAGGACAACTTACCCCAGAAGTTATGTTGGGAGTGCGCGGGCCGCATCGTGTCGTGCTCACGCCTGCGCACGAGAGCGCTCAAGAGTCATCAGCTCATGATGAACATGCTCAATACTGCTTCCTATCTCAGAATAAAAGACGTGAAATCAGTCAGCAGATCCCATATGGAGATCCACACGTCTCTCATAGAGAAGATTCTGGAGCCGAACGAGTGTGACATGTACTTCCAAGATACCAGTGAACCCGTCTTCTTTCATGAGGAACCGGAAGCTAATAAGGATGATGAGATTAAGGCGGAATCACCAGACAGAGCAATCGGAGAATGCCCAGCAAGCCCACTACCCTCAGAAAATCCAGAAACGGACAACCAACCGATGATAAACATTGAAGTCGAGGTGAAAAATGAGCAACAAGACGAAATATACTTCAACGAATACCATGACCATTTCGAATCTGAAGACAATATCAAACTCAGTGAGGTAGCTGGTGAAGTCGTGGAGAAACCCAAAGTCAAAGTGAAAAGAAAGAAAATAAAAGTGGAGAAGAAGAAGGTGAAGGCAAGAAAGAAAGAGAAGAAGAAAGAAGAGGGGGAGAAAGGGGAGGATCCAAATGAGACTATGGATAAGTACAAAACGTCCGACGTGAAACGGCGCAAGACCTCGGACGGCCTCGACGAGTCGCTCTTCATCATCAGCGCGCTCTCCTACGAGGAGCAGATCGCCGAGATACAGAAGAGGCAGGAGAGCAGCGCTTACAGGACTGCTCCGTACAAGTGCAATGTGTGCTACAGAGGGTTCCTGGTCAGCGAGCGGTATAATGCGCATGTGGTGAGGCATAGTGATCAAAGCGGTGCCTTCGAGTGCTTCATCTGTAAAACTCGTCTAAAAACGGGTCGCGCGCTCCGGAAGCATCTCACGGCGCAGCATACTGAGAAGTTCAGCTGTAAAGGCTGTCCGTTCGTCACTAGAAATAGAGGTGTTGCAAGAGAGCATGAAAAATGGCATGCTGGTGCGAAGTACCAATGTCCACATTGCCCAAGTGAATTTGACAAGTTAACCACGTACATGGGTCACATACGAATCAAGCACGTATCGGACTTCGTGTGCGAGCTCTGCGGGTTCACGTTTGTGAGCAAGAAAGGAATTGAAGTACATAAGAAGAAAAAACATAGACTCTCTGAAAAGACGGTGTCACTAGAAGGGCCGTACTGCTGCGTGTGTGACGTCACGTTCGTGTCCGAAGAGGCGCACTCGCGGCACCTCAAGCTGTCCTCGAGGCATAGCAGTGATAATGACCCCAACCGCATAAGAAACGACTCCCAAAGCATAAACACGTCGCACAGCGGGCGCATCGTGCGCAAGATAGAGCGGCGGCCCGTCGTGCACCCGCGGGAGCCGGCGGACCGCGACCCGCGGCCCGAGCCCGGCGGGCCCGTCACCTGCGAGCAGTGCGGGATCCAACTACGCGATCTGCGCCTCTACGCGCAACACTTTCGGCGCGCGCACCCGGACAAGAATCGAACCAAGTACCCCGCGATGAAGACGCCTTGTATGTGTGAACAGTGCGGCAGGATATTCCAGAGTATGGCGCTCCTAAAAGACCACATGTGGGTGCACACCGGCGAGAAGCGCTTTAAATGCGACCGCTGCGAGAAGAGCTTCACGCAGAAGACAAACCTGGTGTTCCACATGCGGGTACACTCCGCCACTCGGCCTACTTACGAGTGCCCGCTCTGTGGGAAACAATTTGCGTTCTTCAATAACAGGAGGCGGCATATGTTTATCCACACCGGTCTAAAGCCCTTCAAATGCGAGACTTGCGGCAAATGCTTCACAACGGCCGGCGAACAACGTGCGCACGTCGAACATGTTCATCTCAAGAAGCCTTGGCCGAAACGCGCGCGAGGCCAGAGGCGAGAACATCCTCCGTGGCAGAAGAATGGGCTGGACCATGAAGATTAG
Protein Sequence: MRCCVPHCSNDTKRRTKTQGITFHMIPRERNLRQSWLEALGMPVWEPKDRSTVCSEHFRNEDFYETKCGLRKIKSGAIPVLGLCSDDLDAPAGSRVCRICMTTNMKMYDTREYQLGIVYQQITGIEWSEKDNLPQKLCWECAGRIVSCSRLRTRALKSHQLMMNMLNTASYLRIKDVKSVSRSHMEIHTSLIEKILEPNECDMYFQDTSEPVFFHEEPEANKDDEIKAESPDRAIGECPASPLPSENPETDNQPMINIEVEVKNEQQDEIYFNEYHDHFESEDNIKLSEVAGEVVEKPKVKVKRKKIKVEKKKVKARKKEKKKEEGEKGEDPNETMDKYKTSDVKRRKTSDGLDESLFIISALSYEEQIAEIQKRQESSAYRTAPYKCNVCYRGFLVSERYNAHVVRHSDQSGAFECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGAKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGFTFVSKKGIEVHKKKKHRLSEKTVSLEGPYCCVCDVTFVSEEAHSRHLKLSSRHSSDNDPNRIRNDSQSINTSHSGRIVRKIERRPVVHPREPADRDPRPEPGGPVTCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCEKSFTQKTNLVFHMRVHSATRPTYECPLCGKQFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHVEHVHLKKPWPKRARGQRREHPPWQKNGLDHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01503039;
90% Identity: iTF_01503947;
80% Identity: iTF_01503947;