Basic Information

Insect: Udea olivalis
Gene Symbol: RREB1
Assembly: GCA_947369235.1
Location: OX376357.1:9890830-9895525[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.082 8.1 7.9 0.4 1 23 56 79 56 79 0.95

2 12 4.6 4.6e+02 2.4 0.8 1 22 121 142 121 142 0.87

3 12 0.019 1.9 9.9 0.1 1 23 270 292 270 292 0.97

4 12 0.001 0.1 13.9 0.4 1 23 301 323 301 323 0.99

5 12 0.00063 0.063 14.5 2.0 1 23 329 352 329 352 0.97

6 12 0.0025 0.25 12.6 1.6 1 23 702 725 702 725 0.96

7 12 0.00021 0.021 16.0 1.3 2 23 919 940 918 940 0.97

8 12 0.022 2.1 9.7 5.3 1 23 946 969 946 969 0.97

9 12 0.087 8.7 7.8 1.2 1 23 1002 1026 1002 1026 0.91

10 12 1.7 1.7e+02 3.7 0.3 1 21 1051 1071 1051 1074 0.74

11 12 0.0016 0.16 13.3 0.2 2 23 1114 1135 1113 1135 0.96

12 12 0.024 2.4 9.6 5.3 1 23 1141 1163 1141 1163 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.082	8.1	7.9	0.4	1	23	56	79	56	79	0.95
2	12	4.6	4.6e+02	2.4	0.8	1	22	121	142	121	142	0.87
3	12	0.019	1.9	9.9	0.1	1	23	270	292	270	292	0.97
4	12	0.001	0.1	13.9	0.4	1	23	301	323	301	323	0.99
5	12	0.00063	0.063	14.5	2.0	1	23	329	352	329	352	0.97
6	12	0.0025	0.25	12.6	1.6	1	23	702	725	702	725	0.96
7	12	0.00021	0.021	16.0	1.3	2	23	919	940	918	940	0.97
8	12	0.022	2.1	9.7	5.3	1	23	946	969	946	969	0.97
9	12	0.087	8.7	7.8	1.2	1	23	1002	1026	1002	1026	0.91
10	12	1.7	1.7e+02	3.7	0.3	1	21	1051	1071	1051	1074	0.74
11	12	0.0016	0.16	13.3	0.2	2	23	1114	1135	1113	1135	0.96
12	12	0.024	2.4	9.6	5.3	1	23	1141	1163	1141	1163	0.97

Sequence Information

Coding Sequence: ATGGATAACATGATCGAAAAACAGGAACTGCGGACCACAAGAACCACAAGCATCGACAGCGACAACTGTTCTGACAGGAGCGATGATGAAGACCTGAGAAGAACTCGCAAAAGAGCAGCATCTACTTCTCCTTCTTATATGCCGGTGGATAAAAGAATCGCCAGATTCGAATGCCCTAAATGTCGACTGCAGTTCGACTCTGCCAATGCGTTTGACCTCCACCGCTTCACGGCGCACGGCGATGACTCTCGAACCAGCTTTGACGATCTCACCTTCGTTGACTTCTCTAGCAAAAAGTTTCCTGATATAGCGCGTGGTGTCTGCGAACGTAACCCTCACATTTCAGTCACAGACCAGCGTTACAGATGCAACATGTGTGCACGAGATTTCCCGTGCAGACAAGCTTTGGACATTCATAGAAAAACATGCACTAGTACCACTCGGATCCCCAGTCCTGAACGGGATAGACGAGAAGATTTCTTTGCAAAGCTTGATCTCAGAAATAGAACCTTTGGTATTCCCGGAACTTTAACACCACCTATGGAGAAATTCACGCCAAAATTTGAAGACGGGCACCACCCGACAAATGGCATAAGACACATCGATGGCGCAAGAGATTTCGCAGATATTCAATCAATTCTAAACGTTACATCTGCTGGGAGCCTTTTGGAAAGATTGACTGGTACCAGGGTTTCGCTCGAAAATACCGTACTAACGCCACCTGACACAATCGGCAAGGAAAGAGATCACGAGGAAACGCAGGATAACTTTGCTGCTGAGTTTAGACGAATGAAACTGCGAGGGGAATTCCCCTGCAGATTATGTCCTGCAAAATTCCCCAATCTTAGGGCTCTAAAAGGCCATAACAGAGTCCATCTAAGCGGGACAGGGCCAGGACCGTATCAGTGTAATATGTGTCCTCATGCTTCGCTTGATAAGGCAGCGCTAGTAAGACACATGCGCACTCACAATGGAGATCGACCGTATGAATGCGCAGTATGCAATTACGCATTTACAACTAAAGCTAACTGTGAGCGACACCTACGTAATCGGCACGCCAAAATCACCAGGGAAGACGTAAAGCGTTCGATAATCTACCATCCTTCTGAAGACCCTAACAACGATGAAGTTAATTCTAAGCTGGCTAGAGATGATGTCAAACGATCTCTTGCATTCCAAACTCCCGAAGTTGAAAGACGTAACGAAATTACTGGGCGAGACACTCCTCTTACTCATTTCAGTCCTAGTTTCATTACAGAAAGACATCCAGTTGCTGCACTAACTACTAAACCTATACTTGAAACCCCTAGTTTGACTCCGAGAGAAACTGAGCAATCCATGCCTAGAATTAAAGTAAAAGGCATAGGCCAATTAACGCAAATACCAGAATATAGACCACCAGAAATCCCGTACAAGAGCAATGAAGTCCATTCAGACACATATGACGATGAAGTTCCAGTCGATCTCAGTACAAGCGACAACAATAGTTGTGACGTACTTGATCTCAGTAAAAAGAAACGTGATGTTGAGAATGATGAGCCTAAAATCCCACCCAGACCATCTTTTGAACCTGATCCGACTGCCGTTACGGCCGCAACGTTCGAAAAGGCAAGACTTTTGCTAGCCCAACAGAGACTTTTTGAAAATACTCTTCCCAAAATTGATCCAAATTATTACGCCAGTCAATTATCTCAACTTTATGCTGGCACAGTCCCAGGAATACCTGGACTCCCTTTACCACCATCTTTTCCAATCACTCCCTACTTTCTTCAACCCTCTTTTTTTCCCCACCCAACTGACTCCCAGGAGCTTACCGAAATAAAGCAAAGGATCCAAAAAGAAATTATCCGCGGACTCAGCATGTCTGGTGGAAGGCTCGTACAAAACGATCAAGAAACTCCAACTAAACAGGAGCCCGAAGAAGAAGACCAAAAGCCTTTAGCTCTATCAGTAACTCCCTCACCACCTCCTCAACCTGAATCTCCAAGACCTATCCCTATGAATAATAACCTCGTCTCACCTAATGATTCTGTTAAAATGGTTATAAAAAATGGCGTGCTCATGCCAAAACAGAAACAAAGACGCTACCGAACTGAAAGGCCATTTTCTTGTTCTCAATGCTCCGCTCGCTTCACTCTACGTTCTAACATGGAAAGACATGTGAAACAACAACATCCTCAACATTGGAGTGTCAGAAGACCAGCGCAAAGAGCCCCTCCGCCGTACCCAACACCTGATGCTCTAGCAGACCGGGTCAAATATGCGCTACTGGCCCGACATTTAGAAAGACCTTTGCAGCAACCTGAGCGATCACCAATACGAAGAGACTCAGACGAAGTTGCTGACAATGAGGAAGATGAGGATGATACTTTAGTCATAGATGAGGAACCTGAAGATCTTAATTCTGAGGAGCATACTGCTGCTCACCGTGCTGCTGCCGAGATCCTAATAGCGACACGTCACCAGGAACTTAACAAGGACTTCGACCTCAAAATAGCTGGAAATCTGATTAACAAACCCGTCCCTTTAATAACCGATAAGACTGAAACAGGGACGGATCCTATCCCGCTGATTAGTAACGATGCTGTGCCAGTAGTACCGACGCGCAGCGATGAGGAAGAAGATGAAGAAGGTCTAGTCGCATCGACTAGTGAAGGCAACAACTCTGGAAGCGATGAAAACAAATCTGAATCTGACACTGGAACTCAGCCACCAAAGAAAAAGTCAGCCTACAGCCTAGCTCCCAACAGAGTCTCTTGTCCATATTGCCATAGAAAATTCCCGTGGTCCTCGTCCCTCCGTCGCCACGTGCTCACACACACCGGCCAGAAACCATTCAAGTGTCCGCACTGCCCACTGCTGTTCACCACTAAGTCCAACTGCGACCGCCATTTACTAAGGAAACATGGAGGATCCGCTCGAGCCATACTAGCTGAGCCTATTACTGATGCTCTACCTCAACCACAACAAGTGAATGATGCTAGAACGGTTCCAGAACGACCTTTTAAATGCGCTTCATGCCCAAGCAGCACGTTCTCTTCATTGGAGACGCTGAAAAAGCACATGTCCTCGAGGCATGGCCCTGGAGAATCGCAGCCTGGTTCCCCCAAAGCTGAGTTGAACGATGATGTGCCTGATGGTGGTCTAGTCTTCAAGTGCCATCTTTGTGAAGCTTCGTTCGGGGAGCGAGGGGGGACACTAGGACACCTTGCGTCGACTCATGTAGCGGAGTATGAGCTCTTGGTCAGTAAGGGGGCTCTGGATGCGGCAAGCGATAAAAGTGAGAGCGCTGACGATGATGAAAGGGGAAAGTTTCCTGATCACGCAAATAGAAAGGTCGTTTGCGCATTTTGCGTCCGCCGCTTCTGGTCTGCGGAAGACTTGCGCCGACACATGCGCACACACTCCGGCGAGCGACCTTTTGCGTGCGACCTCTGTCGGCGGCGGTTCACACTAAAGCATAGCATGCTTCGTCACCGCAAGAAGCACCGCGAGGAGATCACGGATGACGAGGAAGCATCCCCGCCGCACACGCCTGCCGAGACAGAAAACGTAATGAATGGATATCGTTACCAAGACGACGACGGCTCCGGCAATGAGATCCCAAGCAACGTGAACAACAACAACTCCCCTCCCGCTGCCCCTTACGAGAAGAAGCTCAAACTCGACATGACCTCCCGCAAGTACTCCTCAGAGGCCGACAATGACATGGAAAACGGAGGCGACCTCATCGGGAAACTTTTAGGTATTCCCGACAAGACCATCATAAACAAACTACTTTCTTCAGCGGATGAAGCTGCAAAATTCCTCGGAGTCAACAAATGA
Protein Sequence: MDNMIEKQELRTTRTTSIDSDNCSDRSDDEDLRRTRKRAASTSPSYMPVDKRIARFECPKCRLQFDSANAFDLHRFTAHGDDSRTSFDDLTFVDFSSKKFPDIARGVCERNPHISVTDQRYRCNMCARDFPCRQALDIHRKTCTSTTRIPSPERDRREDFFAKLDLRNRTFGIPGTLTPPMEKFTPKFEDGHHPTNGIRHIDGARDFADIQSILNVTSAGSLLERLTGTRVSLENTVLTPPDTIGKERDHEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKITREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFQTPEVERRNEITGRDTPLTHFSPSFITERHPVAALTTKPILETPSLTPRETEQSMPRIKVKGIGQLTQIPEYRPPEIPYKSNEVHSDTYDDEVPVDLSTSDNNSCDVLDLSKKKRDVENDEPKIPPRPSFEPDPTAVTAATFEKARLLLAQQRLFENTLPKIDPNYYASQLSQLYAGTVPGIPGLPLPPSFPITPYFLQPSFFPHPTDSQELTEIKQRIQKEIIRGLSMSGGRLVQNDQETPTKQEPEEEDQKPLALSVTPSPPPQPESPRPIPMNNNLVSPNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAQRAPPPYPTPDALADRVKYALLARHLERPLQQPERSPIRRDSDEVADNEEDEDDTLVIDEEPEDLNSEEHTAAHRAAAEILIATRHQELNKDFDLKIAGNLINKPVPLITDKTETGTDPIPLISNDAVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPITDALPQPQQVNDARTVPERPFKCASCPSSTFSSLETLKKHMSSRHGPGESQPGSPKAELNDDVPDGGLVFKCHLCEASFGERGGTLGHLASTHVAEYELLVSKGALDAASDKSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEASPPHTPAETENVMNGYRYQDDDGSGNEIPSNVNNNNSPPAAPYEKKLKLDMTSRKYSSEADNDMENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01503325;
80% Identity: -