Basic Information

Insect: Udea olivalis
Gene Symbol: PLAGL2
Assembly: GCA_947369235.1
Location: OX376357.1:11790393-11791985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.6e-05 0.0056 17.8 1.4 1 23 111 133 111 133 0.97

2 7 7.5e-05 0.0074 17.4 1.7 1 23 139 161 139 161 0.96

3 7 9.9e-09 9.8e-07 29.7 1.9 1 23 167 189 167 189 0.97

4 7 0.014 1.4 10.3 0.5 1 23 196 220 196 220 0.93

5 7 6.6e-05 0.0065 17.6 0.5 2 23 228 249 227 249 0.97

6 7 0.00021 0.021 16.0 0.5 1 23 263 285 263 285 0.96

7 7 1.3e-05 0.0013 19.8 1.1 1 23 291 314 291 314 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.6e-05	0.0056	17.8	1.4	1	23	111	133	111	133	0.97
2	7	7.5e-05	0.0074	17.4	1.7	1	23	139	161	139	161	0.96
3	7	9.9e-09	9.8e-07	29.7	1.9	1	23	167	189	167	189	0.97
4	7	0.014	1.4	10.3	0.5	1	23	196	220	196	220	0.93
5	7	6.6e-05	0.0065	17.6	0.5	2	23	228	249	227	249	0.97
6	7	0.00021	0.021	16.0	0.5	1	23	263	285	263	285	0.96
7	7	1.3e-05	0.0013	19.8	1.1	1	23	291	314	291	314	0.94

Sequence Information

Coding Sequence: ATGGCCAGTCCGCCACCGAACCCTAGAGCAGGCGAGGAGGGCGGTTCAGAATGCGCGGAAGAGTCGAGCGGGGAACGCGCGCCCACCCCGCAGAAGATATTCATAGCACCGCCTGCCTCGCAACTGCCTAGCAAGCTGCAGTTCGTAGCCGTAGGCGCCGCCGGGCCCAGTGGCAGCATAAAACAATGTTTCCGTACAGTAAAGGCTGCTAGAAGAGTGCCCACCCTGCCACGTCGGCCCAAAGAGGGCGAGGGCTCCTCCTCGGGCTCAGGAGCTCCTGGGCCCTCCGCCGAGCCTGAACGACGCCCACGTCGCGACCGCAGCAAACGGCATGTATGCACCACCTGTGAAAAACGTTTTTCAAGCCCCGGAAAGCTCAGTCAGCATGTACTTTCGCACACTGGTGAGCTGCCATTTTCTTGTGAGCTCTGTGATAAGCGTTTTAACTCCAAATTTAAGCTTGTACGCCATAATCTGATCCATAGTGAGGCACGAGCCTTTGCTTGTAATGTTTGTGGCAAAACTTTTAACCGCAAAGATCATCTCACCAACCATATTAGAGTCCATAACCCAGTCAAAAAATTGTATATGTGTGACAGGCCAGACTGCAGAAAATCTTACACATCCTTGTTGAGTTACCGAAAACATGCTGCACTGCATTCTGCTGAAGAGGGAAACTTACAATGCAAAATATGCGATGAGACCTTTACCAGACGGCAAGACATAGTCTACCATCTAAAAGTACATACAGGAAGTCGCACAGTAAAAAATGAGACTGATAAAAAGTTCCCTTGCGATTATTGTGAACGAAAGTTTTTCACAGCAAAAGATGTGAGAAGACATCTGGTGGTGCATACTGGTAGGCGTGATTTTTTATGTCCATACTGCCCACAAAAATTTGGACGTAAAGATCATTTAGTGAGGCATGTCAAGAATGCTCATCCTGATGAATCATGGAGGTCAGCTGCAGTAGGTACATCCAGAGATCCTGTGCCGGAAGCAACCTCCTTTGAGGAGACATATTCTGAATTTAAATTAGACAGTTCTGATTACTCCATATGGAATCCACCATCAAAAGAAAGCACATCGGAAGGACCAACTCGAGTCCCCTCATCAGATATAATAGTAGAATCCACAGATACAATAGTAGAAATTCCACCAGATCTAGATATTAATATAAAAGTTGAACCATTAGATATAAAATTGGAGGATCCCTTGGATACAAGGCTTGAAGAACCAACGTCTCCAGGCTGTGACCTTTTGCCAGTGGATTACCCTGTGGTGTACATGGTAGGTCCACCTTACACAGTCCCATATTCTGAGCAGCCTCCTTCAGACTTGCCGTATATAACAACAGAGCCGTTAAACGACCCACACTTGCTTCATCCAGGGAATGTGCAGTCTCTACTGTTGGATTCTGGGGAGGGACCATCGAATTTGTCAGGTCAGATGCTAAGAGGGCTTTTAGAAGAGAGTGAGTCTACATACACAGTAGAGGAGGGTCGGCAGCAGCAGCGCTTGCCGGCTTTCACGCAGGCGTTCCAGACCGCACAAAGCCCGAAGCCCCCTCCACCTCCGCCGCCGCCCCACTAG
Protein Sequence: MASPPPNPRAGEEGGSECAEESSGERAPTPQKIFIAPPASQLPSKLQFVAVGAAGPSGSIKQCFRTVKAARRVPTLPRRPKEGEGSSSGSGAPGPSAEPERRPRRDRSKRHVCTTCEKRFSSPGKLSQHVLSHTGELPFSCELCDKRFNSKFKLVRHNLIHSEARAFACNVCGKTFNRKDHLTNHIRVHNPVKKLYMCDRPDCRKSYTSLLSYRKHAALHSAEEGNLQCKICDETFTRRQDIVYHLKVHTGSRTVKNETDKKFPCDYCERKFFTAKDVRRHLVVHTGRRDFLCPYCPQKFGRKDHLVRHVKNAHPDESWRSAAVGTSRDPVPEATSFEETYSEFKLDSSDYSIWNPPSKESTSEGPTRVPSSDIIVESTDTIVEIPPDLDINIKVEPLDIKLEDPLDTRLEEPTSPGCDLLPVDYPVVYMVGPPYTVPYSEQPPSDLPYITTEPLNDPHLLHPGNVQSLLLDSGEGPSNLSGQMLRGLLEESESTYTVEEGRQQQRLPAFTQAFQTAQSPKPPPPPPPPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00074845; iTF_01282689; iTF_01280698; iTF_01281598; iTF_00076876; iTF_00075846; iTF_01335313; iTF_00961243; iTF_00752361; iTF_00408727; iTF_01071871; iTF_00365182; iTF_01503249; iTF_01124860; iTF_01125761;
90% Identity: iTF_01503249;
80% Identity: -