Basic Information

Insect: Udea olivalis
Gene Symbol: -
Assembly: GCA_947369235.1
Location: OX376367.1:915660-940997[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0043 0.43 11.9 1.9 1 23 200 222 200 222 0.99

2 12 0.45 45 5.5 2.7 1 23 229 251 229 251 0.97

3 12 0.12 12 7.4 3.3 1 23 255 277 255 278 0.94

4 12 0.024 2.4 9.5 3.1 1 23 282 305 282 305 0.95

5 12 0.00031 0.031 15.5 0.7 1 23 309 332 309 332 0.97

6 12 0.32 31 6.0 0.7 3 20 345 362 343 364 0.91

7 12 0.015 1.5 10.2 0.1 3 23 377 397 376 397 0.95

8 12 0.0023 0.23 12.8 0.5 2 23 404 426 403 426 0.96

9 12 2.7e-05 0.0027 18.8 0.8 2 23 442 463 441 463 0.97

10 12 3.1e-06 0.00031 21.8 1.1 1 23 469 491 469 491 0.99

11 12 4.4e-06 0.00044 21.3 0.5 1 23 497 519 497 519 0.94

12 12 1.5e-07 1.5e-05 25.9 2.4 1 23 525 548 525 548 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0043	0.43	11.9	1.9	1	23	200	222	200	222	0.99
2	12	0.45	45	5.5	2.7	1	23	229	251	229	251	0.97
3	12	0.12	12	7.4	3.3	1	23	255	277	255	278	0.94
4	12	0.024	2.4	9.5	3.1	1	23	282	305	282	305	0.95
5	12	0.00031	0.031	15.5	0.7	1	23	309	332	309	332	0.97
6	12	0.32	31	6.0	0.7	3	20	345	362	343	364	0.91
7	12	0.015	1.5	10.2	0.1	3	23	377	397	376	397	0.95
8	12	0.0023	0.23	12.8	0.5	2	23	404	426	403	426	0.96
9	12	2.7e-05	0.0027	18.8	0.8	2	23	442	463	441	463	0.97
10	12	3.1e-06	0.00031	21.8	1.1	1	23	469	491	469	491	0.99
11	12	4.4e-06	0.00044	21.3	0.5	1	23	497	519	497	519	0.94
12	12	1.5e-07	1.5e-05	25.9	2.4	1	23	525	548	525	548	0.98

Sequence Information

Coding Sequence: ATGTGTAGTGTGCTGCTTGTCAAGACGGACTCATTCAGGCAGATGTGCCAGAACTCACAAGAACTCCTCAGGTTTGCGGAGATGCATCAGCATTTGATATCAACAGAATACATTGAAAGCCTTAAACTGAACTCCTCTTTTCAAAAACTAACTGTCGAGAATAGTAATGAAATAATTGAATGTGTACACGCAGATGACCAAATCAAAGAAGAAAATAGCGTCCACAAACGAACAAAAAAAGATAATGCTACAATAGATTGTGTACACACCAAAGAAGAAATTACTGACGATGCCTTTTGGAACACATGGGAGCACGAAGACCTAATTCTTGGTAAAGAAGAATCCAGCGACGAGGAGCCATTATCTGCCAAAATCATATCTGTAACCAGAAAAACTGCAATTAAATTGGAAAAAGAAAAGAACGGAAATTCTGTAGCTAACACAAATAACGAAATCAAAAGTGAGAATTATTCGGATAACGATGATGACAGCAACGATTTTCCAGATGGTGAAGTTGATATTATAGTTTTAACGAAAGAACAGCAGATAGAAGACATTCAGTCTAGGAAGACATCTTTAAATTACCTGAATTCGTTTTACAAATGTGATCGTTGCTTTAAAGGTTTTATCACAGATTTGACATATAAAAACCATATGATACGACATGATCCGTCATTCGGTCCTCACGAGTGCGAAGTATGCCATACTCGTTGGAGCACCGGGTCGCGCCTGCGATCACATGTCAGCACGCACGAAAGAAAGTATGTGTGTAGGCTGTGCGACACAGTTACTAGATCTAAGCATCAGGCAAAAGAACATTCAAATTGGCACCATGGTCATACATTCGAATGCAAGTTTTGTGGAGCCTCCTTCACTAAATCTACCAGTCACCTAACGCACCTGCGATTACAACACCCGTCCAAGCACACCTGTAATATCTGTGGGGAATCCTTTATTGGAGTTAATGGGCTCAAGCAACATAAGAAGAAAGTCCATTGGGACAAGAAAGCGGAACCCAAGGCTGACAGCTGCTGCGCACACTGCAATGTGGAATTTCAGAATGTGGAGGCGTACGAGCGACATATTAGCAACTCAAAAGACGAAACGTGTGACCCAGACCTTAGGCCATGTGTACAATGTGGAGAAGGTTTAAGAACTGAAGAAGAATTCAAGAAACATGTAAAAGATCATTCGAAAGAAGAACCAGTCAAATGTGGAGAATGTTCGCGCACGTTCGCGCAAGAGCGCTCATATTCGCTGCACTACCAGCGCGCGCACATGCGCGGCGGGAGGCCGCGCCCGCAGGCCGCGCCCACTCACGTCGTCTGCGAAGTTTGCGGGAAGAAGTGCATTTCGAACGCAACTCTTCGCTACCACCAGCGGATCCACACCGGCGAGAAACCATACCAGTGCACCGAATGTCCTAAAAGGTTCAGCGTTTTGCAGCGGCTACAGATTCACCAACGGACGCATACAGGAGAGCGGCCATACGTGTGTCCTCTTTGTCCGAAGGCGTTCAAACACAAGGCGGCGCTCAATAGGCACGATAGAGTACATACGGGAGTAAAGCCCTACTCATGTTCGCACTGCGGTAAATCTTTCTCGCAATCCAACTCACTTAAAGGGCATATCAAGACTGTCCACCTGAAGATGCCTTCGCCCTACCGACCTAGAAGAGTCCCAGTGGACTGA
Protein Sequence: MCSVLLVKTDSFRQMCQNSQELLRFAEMHQHLISTEYIESLKLNSSFQKLTVENSNEIIECVHADDQIKEENSVHKRTKKDNATIDCVHTKEEITDDAFWNTWEHEDLILGKEESSDEEPLSAKIISVTRKTAIKLEKEKNGNSVANTNNEIKSENYSDNDDDSNDFPDGEVDIIVLTKEQQIEDIQSRKTSLNYLNSFYKCDRCFKGFITDLTYKNHMIRHDPSFGPHECEVCHTRWSTGSRLRSHVSTHERKYVCRLCDTVTRSKHQAKEHSNWHHGHTFECKFCGASFTKSTSHLTHLRLQHPSKHTCNICGESFIGVNGLKQHKKKVHWDKKAEPKADSCCAHCNVEFQNVEAYERHISNSKDETCDPDLRPCVQCGEGLRTEEEFKKHVKDHSKEEPVKCGECSRTFAQERSYSLHYQRAHMRGGRPRPQAAPTHVVCEVCGKKCISNATLRYHQRIHTGEKPYQCTECPKRFSVLQRLQIHQRTHTGERPYVCPLCPKAFKHKAALNRHDRVHTGVKPYSCSHCGKSFSQSNSLKGHIKTVHLKMPSPYRPRRVPVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -