Uoli009448.1
Basic Information
- Insect
- Udea olivalis
- Gene Symbol
- ZFY
- Assembly
- GCA_947369235.1
- Location
- OX376368.1:916612-919840[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.043 4.3 8.8 1.0 2 21 124 143 123 144 0.92 2 17 0.0042 0.42 11.9 0.5 1 23 175 198 175 198 0.92 3 17 0.006 0.59 11.5 0.3 1 23 203 225 203 225 0.95 4 17 3.8 3.8e+02 2.6 4.6 5 20 231 246 229 248 0.90 5 17 0.00011 0.011 16.9 1.9 1 23 264 287 264 287 0.95 6 17 4.3e-05 0.0043 18.2 1.7 1 23 293 315 293 315 0.98 7 17 3 3e+02 3.0 0.4 1 23 349 372 349 372 0.86 8 17 0.00017 0.017 16.4 3.2 2 20 502 520 501 522 0.93 9 17 0.06 6 8.3 0.0 3 23 529 550 528 550 0.97 10 17 0.0026 0.26 12.6 0.4 1 23 555 578 555 578 0.96 11 17 0.00012 0.012 16.8 0.1 2 23 584 605 583 605 0.96 12 17 0.46 46 5.5 3.6 2 21 609 628 609 629 0.91 13 17 0.0002 0.02 16.1 0.3 1 23 655 678 655 678 0.95 14 17 0.00029 0.029 15.6 0.5 1 23 684 706 684 706 0.95 15 17 1.2 1.2e+02 4.2 0.2 3 23 714 734 712 734 0.97 16 17 0.00093 0.092 14.0 0.9 1 23 740 763 740 763 0.96 17 17 0.00015 0.015 16.5 2.0 1 23 769 792 769 792 0.96
Sequence Information
- Coding Sequence
- ATGAGGAACAGACTGATGATGGCGTCCTTTCAGGTGGAGGAAGACGGCGCCTTTCCTCGGGGGGTCTGCCGCGACTGCGCAGAGAGCGCCCTCGGAGCGGCCACCTTCAGACAAGGCTGCAAGGACTCCTTCAACCAATGGTCCCAAGCGGCCGCCTTTCTGACCTCCATTATTCCTCCAACGAGCAACGACAAAGCCTATTACATATTCTACAACGTTCAAGAGAGAAGCATCATCGGAGACCAGGTAGCGAGTGCTGGCGATAAAAAAAAAGCAGTCCAAAGACTAAACGCGCAATTTCAAAGTACAACTAGTGAAGAAGCAGTAGAAAAGGGGGTAACCAGAAGAATTAGGAAATTTCGGCACTGCGTTTGTCCAGATTGCAAGAAGAAGTTCCTGTTGCCGCAATATTTAAATTCGCATATTAAAAATACTTTGAAGAGAGCTTGTGAAGTGTGTGGTAGTGTCATGCACAAGTCAAAGATAGCAGAGCATATGAGCGAGGTGCACAGGAAGGTCGTGTTCACTTGCGGCCTCTGCCAACAAATGTTTGACGATCCGCAAACTCTGAACACCCATTTCATAAACCGTCATAGCGAAACTTCTCATATCTGCAAAGTTTGCGGCAGTGGATTCAATACTGAACGAGCGTTAAGCGCTCATGTGTACTCCCACACACTTTTCCACTGTAAATGCGGTCGGAGTTTCAGTAATCGCAAATGTTATTTCTACCACAAAACACAATGCAAGCGTGCGGGTAAAACAGAAAAAAAGAAAATAGTAAACGTGTACCAGTGTCATGATTGTGGCAATAAATATACTAAGAAGCCGTCGTTGCGCGTCCATATAATACAAAAACATCTCCGCGTGCTGCCATATGTCTGTGAGACGTGCGGTAAGCGAACTTCAACTATTGGACATTTGAGGTCTCACGAAAAAACTCACATGCTAGAGAGGCAAACTTTTGAATGCTACTGCGGCGCGACAATGCGGACTGAGTTAGGATACCAGCTCCATGTTAGAATCCATTCGGGTGAGAAGCCGTACGAATGTGGCGAGTGTGGGGACAAGTTCCTGTCCGCGTCGAGGAGGCTAGACCATATAAAACGGAAGCATAGAAGCGCTAAGGACATGCCACATGCCTGTGACGAGTGCTCTGCTAGATTCATGGAAGAAGACACTCACCTTCCTCTAGGCGCATGCGCGACGTGTGCCTCCAGCGCCCTCGCTGCTCAAGAGTTCCGAACTACGACACAAAACTCACAAAAAATGTGGTATAAAGCCGTGAACGCTCTTCGGGATATACCCATATCAGCCTCCTCCGGTGTTAGGTCCCTATGTGCTTTTGTTAAACACGATAACTTATCCATTCACGTCGTGAAAGATTTCTCAAGTGGAAATGCGAAAACTTTAATGAATAGACTTAAAAATAGGCTCAAGAAAAAAGGAAAAAAGGATGTTCCGGAAAAGAAGCCTAGAATGACGCGCGCCGGACAGGCTTGCAGCTGCCCTGACTGCGGCAAGTCATTTTACAGTCCTTTCTACTTGTGCCAGCATTTAAGCAACAGCGGGCAGAAAGAGGCCTGTGCTATTTGTGGCCTCGTCGTGCCTAGAGGCGAAGAGATGAAAAAACATCTACTGACAGTGCACGGAGAAAACATTTTCACCTGCGAGCAATGCCCTCAGCTCTTCACAAGCAATTGGCGGTTAGAAAAGCACGTTGCAAAGTCGCATAAACCCGGTTCTTTGACGTGCGCGGACTGCGGGCGTACTTTTCCGAGGAAGGCGACGTTTGATGCGCATGCGCAGATGCACGCAGTCCGCACCTGCAGAACGTGCGGAAGACAATTCACAAACCGTCTCTGCTACAGAGAACACAGGTCTAAATGTGAGCCTGACGCTCGGCCAGATACCCAGTTTTTGTCGCGAAATAAACGTTCCAATATTCGTGATCCGGCTACTTTTACGTGCGATTACTGCGGAAAAACTTATTTATCGCGACCTCAATTGAAGAACCATATTATTTGGATTCACATGGATGTGCGACCACATCAGTGCCAGTGGTGCGGTAAAAGGTTCTATACTCCGGCCCGCTTAGCGGAGCACACAGTAGTCCACACGAGGGAACGCAACTTCGGTTGCGACGTCTGCGGAATGAAACTAGTCTCACGGATGGCTGCTATCTATCACAAAAGGCGTCATACCGGTGAAAAGCCCTACACCTGTGAAGATTGTGGTGAGAAGTTCATCTCTTCGTCTCGTAGAACTGAGCATGCCAAGCGTCGGCACGGCAAAGGGCCTTTATTTCAATGCGAGCATTGCGAGTCTGTTTTTGTTCGTAATGCAGAATTGAAGAAGCATAAAGAAAAGTCGCATCGCTTGGAGTTTTCGGCGAAGTCAGTTTTTCCTCCAGGAAAGAGGTCTGCTCTGGAGGTTGAAAAAGTAGAGATCCGAGGAAACACTGAAGATGAGTCAGAGAGGCATATAGACAGAACGGAGGGCGCTCCGTTGACGCTAGTTGAATATAAGATGGTAACTGATTGTTAG
- Protein Sequence
- MRNRLMMASFQVEEDGAFPRGVCRDCAESALGAATFRQGCKDSFNQWSQAAAFLTSIIPPTSNDKAYYIFYNVQERSIIGDQVASAGDKKKAVQRLNAQFQSTTSEEAVEKGVTRRIRKFRHCVCPDCKKKFLLPQYLNSHIKNTLKRACEVCGSVMHKSKIAEHMSEVHRKVVFTCGLCQQMFDDPQTLNTHFINRHSETSHICKVCGSGFNTERALSAHVYSHTLFHCKCGRSFSNRKCYFYHKTQCKRAGKTEKKKIVNVYQCHDCGNKYTKKPSLRVHIIQKHLRVLPYVCETCGKRTSTIGHLRSHEKTHMLERQTFECYCGATMRTELGYQLHVRIHSGEKPYECGECGDKFLSASRRLDHIKRKHRSAKDMPHACDECSARFMEEDTHLPLGACATCASSALAAQEFRTTTQNSQKMWYKAVNALRDIPISASSGVRSLCAFVKHDNLSIHVVKDFSSGNAKTLMNRLKNRLKKKGKKDVPEKKPRMTRAGQACSCPDCGKSFYSPFYLCQHLSNSGQKEACAICGLVVPRGEEMKKHLLTVHGENIFTCEQCPQLFTSNWRLEKHVAKSHKPGSLTCADCGRTFPRKATFDAHAQMHAVRTCRTCGRQFTNRLCYREHRSKCEPDARPDTQFLSRNKRSNIRDPATFTCDYCGKTYLSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRERNFGCDVCGMKLVSRMAAIYHKRRHTGEKPYTCEDCGEKFISSSRRTEHAKRRHGKGPLFQCEHCESVFVRNAELKKHKEKSHRLEFSAKSVFPPGKRSALEVEKVEIRGNTEDESERHIDRTEGAPLTLVEYKMVTDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -