Basic Information

Insect: Udea olivalis
Gene Symbol: L
Assembly: GCA_947369235.1
Location: OX376341.1:13566694-13572087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.2 1.2e+02 4.2 4.8 1 23 3 25 3 25 0.97

2 16 4.1e-07 4.1e-05 24.5 3.7 1 23 31 53 31 53 0.99

3 16 9.2e-06 0.00091 20.3 0.1 1 23 59 81 59 81 0.98

4 16 0.00053 0.053 14.8 0.0 2 23 97 119 96 119 0.95

5 16 4.9 4.8e+02 2.3 0.1 9 23 150 165 146 165 0.93

6 16 0.62 62 5.1 0.1 3 23 217 237 216 237 0.97

7 16 0.53 53 5.3 0.0 3 20 252 269 251 270 0.86

8 16 0.00024 0.024 15.8 0.6 1 23 280 303 280 303 0.94

9 16 0.026 2.6 9.4 0.1 1 23 308 331 308 331 0.92

10 16 0.00036 0.035 15.3 0.2 1 23 388 412 388 413 0.95

11 16 0.00071 0.071 14.4 0.0 2 23 470 491 469 491 0.96

12 16 0.047 4.7 8.6 0.0 1 23 499 521 499 521 0.98

13 16 1.5 1.5e+02 3.9 0.7 2 23 529 550 528 551 0.93

14 16 0.71 70 4.9 0.3 1 23 625 647 625 647 0.94

15 16 0.0028 0.28 12.5 0.1 1 20 655 674 655 677 0.95

16 16 0.11 11 7.5 0.4 1 23 684 706 684 706 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.2	1.2e+02	4.2	4.8	1	23	3	25	3	25	0.97
2	16	4.1e-07	4.1e-05	24.5	3.7	1	23	31	53	31	53	0.99
3	16	9.2e-06	0.00091	20.3	0.1	1	23	59	81	59	81	0.98
4	16	0.00053	0.053	14.8	0.0	2	23	97	119	96	119	0.95
5	16	4.9	4.8e+02	2.3	0.1	9	23	150	165	146	165	0.93
6	16	0.62	62	5.1	0.1	3	23	217	237	216	237	0.97
7	16	0.53	53	5.3	0.0	3	20	252	269	251	270	0.86
8	16	0.00024	0.024	15.8	0.6	1	23	280	303	280	303	0.94
9	16	0.026	2.6	9.4	0.1	1	23	308	331	308	331	0.92
10	16	0.00036	0.035	15.3	0.2	1	23	388	412	388	413	0.95
11	16	0.00071	0.071	14.4	0.0	2	23	470	491	469	491	0.96
12	16	0.047	4.7	8.6	0.0	1	23	499	521	499	521	0.98
13	16	1.5	1.5e+02	3.9	0.7	2	23	529	550	528	551	0.93
14	16	0.71	70	4.9	0.3	1	23	625	647	625	647	0.94
15	16	0.0028	0.28	12.5	0.1	1	20	655	674	655	677	0.95
16	16	0.11	11	7.5	0.4	1	23	684	706	684	706	0.94

Sequence Information

Coding Sequence: ATGCCGTTCCGCTGCGAGTTCTGCGCGCGCCTGTTCAAACACAAGCGGTCGCGGGACCGGCACGTGAAGCTGCATACGGGTGACAGAAAGTACCGCTGTCAACACTGTCCGGCTGCTTTCTCTAGAAGCGATCACCTCAAGATTCACATGAAGACCCACGACAACCAGAAGCCGTTCCAGTGCAACATCTGCAACCGCGGGTACAACACCGCGGCGGCTCTGACGTCACACATGCAGGGACACAAGCGCGACCGCGAGGGGCGCGAGCCGGACCGCCGTCGCGCGCTGCGCTGCCTGCGCTGCGGCGACGCCTTTAGGAGACCTGACTTACTGCAGGCTCACATGGCTAGTGCGCACGGTGTGGAATCATCAGCTATGACTCCACCACGTCGGGTGGCATCCCAGCCTCCGCCGACACTCCTCGCGTGCATATACTGCACTCGCGACACGTTCACCAGCATGGAACAACTGCAGCTTCACGTCCGAGCCGCTCACTCAGCGTTACTGAACGGGGAGACGCCAGCTACCATTGACCAGCCAGTTCCGACTGATCTTAGCAAGCGACCACCTGAAGAAGCTCCGCCGGTGAAACGGCCACGCTCCGGATCTATTACGCCGCAAACCGCGTTGTCGCCAAGTACATTGCTCTGCAACCAATGCGATGCAGCTCTGCCTGATTTTGAAGCATTTCGAACACATGTGAAGGGACACCTGGAAGAAGGTGGGGAGCTGAATCGCTCGAGCCCGGCGCCCTGCCTGCACTGCGGCGCCACCTTCGCTGACGCGGCTGCCTCGGAGCGCCACCTCGCGGCGTACTACCTCGCCGTCTCGTGCGAGTACACATGCCACAGCTGCGCCAGAAGCTTCTCGGCTCCGGACGACCTGCAGAAACATCTCCTAGATTTGCACGCCCACCACTTGTATAGATGTTCGCTTTGCAAAGAAATCTTCGATTCAAAAGTTGCGATTCAGGTCCACTTCGCAGTGGCGCACAGCGGTGAAAGCAAAGTGTGGATGTGCCGATCATGCGGCGGCAGCGGCGGCGCGCTTCGCTCCGAAGCAGAAGGCGCGGCCCACGTGCGGTCGCGGCACGCGGCGGCGGCCGTGCGGTGCGCGTGCGGTGCCGTGCTGGCGGGCGCGGGGCTGCGGCCGCACCGCGCATACCGCTGCCCCGCGCCCGCCTGTACTGAGACCTTCGCGGTGCAGTACCTGCTGGAGCGGCACATGCAAGCGCATCACGCTTCTCCGCATCCGGGCGTCAACGGCGACATGAGACAAGTAAAGCGACTAGAGAACAACAACGCCGTAGACGGCACAGACGGCGGCTGTTCTCCTTGCACTACCCTCGCGGAAGGCGCAACGCCAGGCGAGGAGCGGCAACGTCGCAAGAACGGCGTGGTCGCGCTGCAGTGTGCGTACTGCGGGGAACGCGCGCGCTCACGAGCGGATCTTGAGGCGCACACCCGCGCGCATTCTGGTGCTGCCGCGGCGAGGCATAAGTGCCTCATCTGTGACGAAGTGCTGCCGTCAGCGGCCGTGCTGGCTGAACACAAACTCACGCATTGCAAGGTGGTAGCAGGAGACACGTGTGCGAGATGCCGAGCCCGGCTCCCGTCTGAAGAATCATTCCTGTCCCACATGGCGCGGCATCACCCCACGCTGCCGGCGCCGTGCGTGGTGTGCCGGCAGACGCTCGCCTCCGAGGCCGAGGCGCGTCTGCACGCTCGCTTCCACCTGCGCCCTGCGGAGGACGAGCAAAGATGCGCAATATGTCTCCGCGCGCTAACTGAGGGAGAAGCGGGCGACGGCGCGCGCGCGTGCTCCTCGTGCTATGCGCGACATGCTGCACCCCGCCCTCCGCCCCCCGCCGACCACGACTGCCGTCTCTGTCGCCGCGCTCTAGGATCCCCCACGCGCCTGCAGGCCCACCTCATCGAGCATACCTTCGCCGGTATCAGCGCATTCACCTGCTACCTTTGCTCTGCCGTCTTCACGAGCGCAGCCGGCCTGCAACGTCATCTACCCGAGCACGCCTCCGCACCGAAACCTTTTGACTGCGGTCGTTGCGGTTTGAAGTTCTTCTTCCGCGCCGAATTGGACAACCACGCGTTCGTGCATCTGGAGGAGGCCGAGATAGCTCAGAGAGCGTTTTATGAGGCGTACGCGAGAGGCGCCGCGTCCGCTTGGGCCGCGCTGGCGCCGGAGAGCCTTACGCACGCGCCGGTGGCTACTCCCGCGCCGGCGGCCGAGGTTAAACGCGAACCGGATATCAAGGAAGAGCGGAACACTGACGAGTATATCGAAGTGTCCTCTCCCCCGCCGCCCGCGGCGGCGTCCCCGCCCGTGGTCAAGCAAGAGAAGCCCGACGAAGACTGA
Protein Sequence: MPFRCEFCARLFKHKRSRDRHVKLHTGDRKYRCQHCPAAFSRSDHLKIHMKTHDNQKPFQCNICNRGYNTAAALTSHMQGHKRDREGREPDRRRALRCLRCGDAFRRPDLLQAHMASAHGVESSAMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGETPATIDQPVPTDLSKRPPEEAPPVKRPRSGSITPQTALSPSTLLCNQCDAALPDFEAFRTHVKGHLEEGGELNRSSPAPCLHCGATFADAAASERHLAAYYLAVSCEYTCHSCARSFSAPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWMCRSCGGSGGALRSEAEGAAHVRSRHAAAAVRCACGAVLAGAGLRPHRAYRCPAPACTETFAVQYLLERHMQAHHASPHPGVNGDMRQVKRLENNNAVDGTDGGCSPCTTLAEGATPGEERQRRKNGVVALQCAYCGERARSRADLEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCARCRARLPSEESFLSHMARHHPTLPAPCVVCRQTLASEAEARLHARFHLRPAEDEQRCAICLRALTEGEAGDGARACSSCYARHAAPRPPPPADHDCRLCRRALGSPTRLQAHLIEHTFAGISAFTCYLCSAVFTSAAGLQRHLPEHASAPKPFDCGRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALAPESLTHAPVATPAPAAEVKREPDIKEERNTDEYIEVSSPPPPAAASPPVVKQEKPDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01437318;
90% Identity: iTF_00365139;
80% Identity: -