Uoli019572.2
Basic Information
- Insect
- Udea olivalis
- Gene Symbol
- -
- Assembly
- GCA_947369235.1
- Location
- OX376350.1:6860963-6891201[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.00012 0.012 16.8 1.5 1 23 423 445 423 445 0.96 2 36 0.0059 0.58 11.5 0.6 1 20 451 470 451 473 0.94 3 36 3e-05 0.0029 18.7 5.6 1 23 492 514 492 514 0.98 4 36 0.00014 0.014 16.6 4.1 1 23 520 542 520 542 0.99 5 36 5e-05 0.0049 18.0 5.3 1 23 548 570 548 570 0.97 6 36 2.3e-05 0.0023 19.0 8.8 1 23 576 598 576 598 0.97 7 36 1.6e-05 0.0016 19.5 4.0 1 23 604 626 604 626 0.96 8 36 0.00014 0.014 16.6 6.7 1 23 632 654 632 654 0.97 9 36 0.00014 0.014 16.6 6.5 1 23 660 682 660 682 0.97 10 36 6.9e-07 6.8e-05 23.9 1.9 1 23 688 710 688 710 0.98 11 36 7e-05 0.0069 17.5 7.9 1 23 716 738 716 738 0.98 12 36 1.1e-05 0.0011 20.0 6.6 1 23 744 766 744 766 0.98 13 36 3.2e-05 0.0032 18.6 5.4 1 23 772 794 772 794 0.98 14 36 1.8e-05 0.0018 19.4 2.4 1 21 800 820 800 821 0.95 15 36 0.098 9.7 7.6 1.7 8 23 842 857 841 857 0.94 16 36 1.8e-05 0.0018 19.4 2.4 1 21 863 883 863 884 0.95 17 36 0.098 9.7 7.6 1.7 8 23 905 920 904 920 0.94 18 36 1.8e-05 0.0018 19.4 2.4 1 21 926 946 926 947 0.95 19 36 0.098 9.7 7.6 1.7 8 23 968 983 967 983 0.94 20 36 1.8e-05 0.0018 19.4 2.4 1 21 989 1009 989 1010 0.95 21 36 0.098 9.7 7.6 1.7 8 23 1031 1046 1030 1046 0.94 22 36 1.8e-05 0.0018 19.4 2.4 1 21 1052 1072 1052 1073 0.95 23 36 0.17 17 6.9 0.8 8 23 1094 1109 1093 1109 0.94 24 36 1.8e-05 0.0018 19.4 2.4 1 21 1115 1135 1115 1136 0.95 25 36 0.098 9.7 7.6 1.7 8 23 1157 1172 1156 1172 0.94 26 36 1.8e-05 0.0018 19.4 2.4 1 21 1178 1198 1178 1199 0.95 27 36 0.098 9.7 7.6 1.7 8 23 1220 1235 1219 1235 0.94 28 36 1.8e-05 0.0018 19.4 2.4 1 21 1241 1261 1241 1262 0.95 29 36 0.098 9.7 7.6 1.7 8 23 1283 1298 1282 1298 0.94 30 36 7.1e-06 0.0007 20.7 4.4 1 23 1304 1326 1304 1326 0.98 31 36 3.5e-05 0.0034 18.5 7.1 1 23 1332 1354 1332 1354 0.97 32 36 3.5e-05 0.0035 18.5 6.1 1 23 1360 1382 1360 1382 0.98 33 36 2.4e-05 0.0023 19.0 8.0 1 23 1388 1410 1388 1410 0.97 34 36 1.8e-06 0.00018 22.6 3.1 1 23 1416 1438 1416 1438 0.96 35 36 0.001 0.1 13.9 0.3 1 23 1445 1467 1445 1467 0.96 36 36 0.73 73 4.9 5.0 1 23 1476 1498 1476 1498 0.98
Sequence Information
- Coding Sequence
- ATGAATCCTGAACACCACAGTATGAACACGGGTGGTGGCCAGCCTCCTGGAAGTTCAGAGTCTCAGAACCAGAGGGTGCAAAGTGCGCAGCAGCAGCAGCAGGCCAATAACTTGCCTGCCACAACCTCAGCAACCGACCTGAGGGTGAATTCGGCCGCCGTGAACGTCGCTTTGTCTAGCGTCGCCAAATACTGGGTGTTTACAAATTTATTTCCTGGCCCTATACCTCAAGTATCCGTGTATGGATTGCCTACTGGTGCTAGAATCGAAAATGGAAAACCTGTTCAGGATATTGGACAGCATGCAAGTATACTCAATGGTGACCCAAATATCATTTTGGGACATCATGGTGGCCAACCACAGGTCACAGTATCAGCTGCTGGAAGCCAACAAATTCCTGTATCTCAAATCATTGCAACACAATCTGGACAAACTCATGAAACTTTGGTGGCCCACAGCCAACAACAGGAGCTTGCTGTACAGCAAGCGTCAAATGGCGCTCAGGTCACAGTTAGTGCAGGCCAACCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTTCAACACCATAACATTGATATGGTAAATCATGTGGGGCATCATTCACAACACTTAATGCAGCAGCAACTTATGGCCAGTGCCCGTCCAGAACACTCAAATCAGCAGATTCAGCTTACTGTCAGTGAAGATGGCATAGTAACTGTGGTCGAGCCGGGGGGCGGGAAACTGGTAGACAAGGAGGAGTTGCATGAAGCCATCAAGATGCCCACAGACCATCAGACACTTACTGTGCATCAGTTGCAACAGATTGTTGGCCAGCAGGTAATAGACAGCGTCGTCCGCATAGAACAAGCGACGGGAGAACCAGCGAATATCCTCGTCACCCACAACCCCGATGGGACAACTTCAATAGAAGCCAGCGCCGGTGATCAGCTGATCGTCAAAGATGAAAAGAGCGGCGGCAACAAGATTGAGACGGCGCAGTACGCTGAAATAAAAGATATAAAAGGGATAGACCTCAAGAGTGTCGGAGCGATGGGAATGGAGGGCGCCGTAGTGAAGATATCCGGCGCGTCGGAGCACGATCTGCACGCCATGTACAAAGTCAATGTGGAAGACCTGTCGCAGCTGCTCGCCTACCATGAGGTCTTCGGGAAACTCAATGCTGATGGACAGCCTCAGGCTAAGGTCATAGGCGAAGTGGAAGTGGAACCCGGCACCAGCGCCGCCATGTCGGCAGAGGAGTCGTCGCCGGGCCACCACGCCTGCGACATTTGCGGGAAGATATTCCAGTTTCGTTATCAGCTTATTGTGCATAGACGATATCATGGGGAGACTAAACCATTTACATGTCAAGTTTGTGGTTCCGCATTTGCCAATCCGGTTGAATTATCAAGACATGGGAAATGTCATCTTGCTGGGGACCCCGCTGAAAGGCATCAGAAGAGGCTGATGCAAGACAAGCCGTACGCCTGCACCACTTGCCATAAAACGTTCTCAAGAAAGGAACATCTAGACAACCATGTACGCAGCCATACAGGGGAGACGCCATACAGATGCGAGTTCTGCGCGAAGACATTCACGCGGAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACCCGCAAGGAACACTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCACACCATTGCCAAATGTGCGGTAAGAAGTATACTAGGAAGGAGCATTTACAGAACCATATGAGATCGCATACGAATGATACGGCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAAGAACACTTCAACAATCATTTTCTATGGCATACTGGCGAGACCCCCCACCGCTGCGACTTCTGCTCCAAGACTTTCACCCGCAAGGAACACTTGCTAAACCACGTCCGCCAGCACACGGGCGAGTCTCCGCACCGCTGCAACTTCTGCAGCAAGTCGTTCACGCGCCGCGAGCACCTGGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGGTACTGCCCGAAGGCTTTCACTAGGAAAGACCATCTTGTAAACCACGTCCGCCAACACACAGGCGAGTCTCCGCACAAATGCTCGTTCTGTACCAAATCCTTCACTCGCAAAGAGCACCTCACGAACCACGTGCGCCAACACACCGGCGAGTCCCCGCACCGCTGCACCTACTGCGCGAAATCCTTCACTAGGAAGGAACATCTAACTAACCATATAAGACAGCACACGGGCGAAACGCCGCACAAGTGCACGTTCTGCCCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGTGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCCCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCAAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGTATGTAGTGTGGCTTGGTCGGTCGAAGTCGCGATTGGTAACTCTGAATGTGGTGAATGTGTCGCGCGCCTTCTCGCGCAAGGAACACCTGAACAACCACGTGCGCCAGCACACCGGCGACATGCCCTACAACTGCTCCTACTGCACCAAGAGCTTCACCAGGAAGGAACATCTCGTCAACCATGTTCGGCAACACACAGGCGAGACTCCATTCAAGTGCTCGTACTGCACCAAATCGTTCTCGAGGAAGGAGCATCTCACCAACCACGTGCACCTGCACACCGGCGAGACGCCGCACAAGTGCGCGTTTTGCACTAAGACATTCTCCAGGAAAGAGCATTTGACCAATCACGTCAGAATTCATACCGGTGAGTCACCACACCGTTGCGAGTTCTGTCAAAAGACTTTCACTCGCAAGGAGCACCTCACGAATCATATGAAGCAGCATACGGGAGACAAGCCTCACGCCTGCAAGATCTGCAACAAGCCCTTCGCGAGGAAAGAGCATCTCGTCACGCATATGAGGTCGCACAGTTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAAGTCGGGCGCGGCGCGGCCTTATCGCTGCGAAGTTTGCTCGAAGGACTTCCTTTGTAAAGGACATCTAGTATCTCACCGGCGGACGCACGCGGAGGCGGCGGAGGGCGGCGCCGACGCGCCCGGCGACGCCGCGGACTGCGCCGACTGCGACAAACTGGAGCCCGAGCTGCCGGAGAGGAAACACGATATTAGAGCTTCGACGGAAAACAGGACAGCAGAGAGCAATGTAACACAAAACCAACAAACGAATGCGGCTGTGATGCAAATAACGACTCAGCAAGTGCGCGCCGCGACGGTAGCGGCGGCGCCCAGCGCGGGCGCCGTGCCGGGCTTCGCGCACGCCGCGCCCGCCGTCGCGCACCACCCCGTCACCGTCAACTACTAG
- Protein Sequence
- MNPEHHSMNTGGGQPPGSSESQNQRVQSAQQQQQANNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDIGQHASILNGDPNIILGHHGGQPQVTVSAAGSQQIPVSQIIATQSGQTHETLVAHSQQQELAVQQASNGAQVTVSAGQPTHQQVPNNRVEFVQHHNIDMVNHVGHHSQHLMQQQLMASARPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHQTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDQLIVKDEKSGGNKIETAQYAEIKDIKGIDLKSVGAMGMEGAVVKISGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVIGEVEVEPGTSAAMSAEESSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHQKRLMQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQMCGKKYTRKEHLQNHMRSHTNDTAFRCELCGKSFTRKEHFNNHFLWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFPRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRYVVWLGRSKSRLVTLNVVNVSRAFSRKEHLNNHVRQHTGDMPYNCSYCTKSFTRKEHLVNHVRQHTGETPFKCSYCTKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDKPHACKICNKPFARKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSGAARPYRCEVCSKDFLCKGHLVSHRRTHAEAAEGGADAPGDAADCADCDKLEPELPERKHDIRASTENRTAESNVTQNQQTNAAVMQITTQQVRAATVAAAPSAGAVPGFAHAAPAVAHHPVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -