Basic Information

Insect
Udea olivalis
Gene Symbol
-
Assembly
GCA_947369235.1
Location
OX376347.1:11840693-11843377[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-07 0.00014 22.3 0.0 1 44 21 64 21 65 0.93

Sequence Information

Coding Sequence
ATGCCACCAACGCCTAAAAAAACAAAAAAGAAGAAGCTAGGAAGGACCAATTTTGGGTACACCGAAGAAGCTTTAGCTAATGCTTTGAGGGACATCCGCGAAAACAATAGAGGCATAAGGGAAACTTGTCGCCAATACTGTATACCACGAAGTACTATTCAAGACCGACTGTCAGGAAAAGTTACCGAAAAGCCGAGAAAAGTTGGCCCTGATCCAATATTTGGTTTCGAAGGCGAATCCAAAATTGTTAACTGGATAATCGAACTGGCCAAATGTGGTCTTCCGGTGAATAAAGAAGACCTTTTAACCACAGCCGGAGAGCTGGCTAAAGACCTAAAAAAGGAAAATTGTTTTCCTGGGGGAAAACCTGGAATTAGGTGGTACAAAAATTTCTTGAAGAGACACCCAGAAATCAGTGTGCGTGAACCTGAATCAATCAACAAAGCCAGGGAAGCTGTCAAAGAAAGTGGTATAAGAAAAtggtttgcagatctagaagtctttttagcagaaagaggcttatctgacattttgaaagacccaaaacgtatcctcaacggcgacgaaacgggaatttcgctttgtcctaagacgggaaaagtccttgctcccaaaggttttaaaaacgtgtatactgtgaacaaaggcaatgaaaaggagacaatcacagtattgatcgtgatgacagcagctggcgacatatgtccgcctttagtcgtgtacccatacataaagccgccaagagctgtcgtacagagcgtgcctgatgattgggtattaggcaaaactgaatctggctggatgcgaagcgatgtattctatgaatacatcgcgaatgattttaataaatggctattggagaaagaagtccaaaaaccagttttactctttgtagatgggcacaaatcccatatgtcgatgccgctaagtgagttttgtgaaggcaacgatataatattatatgctttaccaccaaacacaactcatattctccagccggctgatgtcagcgtctttagacccctaaaacaaaactggaagcggactgttataaattggcagaGCCAGCCTGAAAACATTAATAAAACGGTTACCAAAACAAATTTCTGTAAAGTTTTCAAGGATACATTAAATGAGGATATGGTTGACACAATAAAAAATGGATTCCGAAAATGCGGACTCTACCCATTCAACGTAAATAATGTGGATTTCACAAAATGTGTTAAGGACGCACAGATTCGGAATTCGTTAAGTGAACCAAAGACTCTAAATGAAAGACATTTCACTATAGCCAAAGCAGTTTTTTCGCTAATGTCAGATAATATTGCCAAACTTGGAATTGATCCCCGTCTTATAATATCCGAGCTTGAGAAAACAAAATCATCGTATTTAAAAGAACGCCGGTCGAAGTCAAGAACACCCCGAAATTCTAAAACTCCTCGACACTCCCGCGATTCCACGCTCTGCAAAGAAAATACTCCAACTGCAGTGTTGATTGAAGAGAGTTCCACATCGATTCAGCATCCTTGTGATTCCTCGCTTACATCAGGAAATCCTCAGACTCTACCTCTAACTGAAGAGTGTTCCATTCAGATTCCTGAAATTGGATCTCTGGTGTCATTAAGTGAAGTATCCCTGATGCCTTTTGACGAAATACATATTTCGGACATTATATCTCAGAATGAAAATTTTCAAATCGTATGCACTGCGTCAAATGTTATCAACAGTGATGAGATACACGCCTCGATAGGCAGAGTAAATCCAACAACAACAGAAAATCTGTACAACAGCAATCAAGAGTCAGTACCTGACTCTGACGGGAATGCACCTATGTGTAAAAATAAGGATGGATCAACAAAGCAACCAGAAGATACGGTAAATAATGTCATCGTCTCTGTTGATGTTCATCCTGAGCCTTCGCCCAAGAGGAAACGGCCTATTCCCTTTAAAGAAAACTTGCCCGACATCAACTCGTCTGTATTTTCGAAGGACATTTCCGCAATAGAAAATGATTTAAATATGATCAATGTTGATGTTCATGCTAAGCCTACGGCCAAGAGTATTCCCTTTGAAAAAAACTTGTCCGACATCAACTCGTCTGTATTTTTGAAGGATATTTCCGCAATGGAAAATAATTTAAATATAATCACTGCGGATTTTGATGCTGAGCCTACGGCCCAGAGTACTCCCGTTGTTATTGATCCATTTCAAAAACATTTGAAATTTCCAATTCCTCCTGCCACAACTAAAAAAAGAGGGTTTGTTCATATGCCAAGTGCGATTTCTGGAAAGGCCTGGCGAGACCACCATGAAATGAAAGACAAAATTAAGCAAGAAAAAGACGACCTGAAAAAGAAAAGAAAGTTAGAAAGGGATGCTAGGAAAAATGACCCTCCTGCGAAGAAAAAGAAAAAAAATCAGATAGCTAAAACAAAAAATGATGAAAAACAAAACAAGGATAGACAAAAATGCAGTGATTGTCAGGATGACCTTATAAGCGACACCGAAGAAGATGCCGAAAAAAACATAGGCTGTGACAGTTGCGTCCGCTGGTATCATTTAAGATGCACTTCCCTAAAGAATTTGACATATGTTGAAGCTGCTGATGCTGAATATCAGTGTGAAATCTGTCAAAGAGTGAAAAAAATTAGAGACGAAATATTAAAACCATATTATAATAACTAA
Protein Sequence
MPPTPKKTKKKKLGRTNFGYTEEALANALRDIRENNRGIRETCRQYCIPRSTIQDRLSGKVTEKPRKVGPDPIFGFEGESKIVNWIIELAKCGLPVNKEDLLTTAGELAKDLKKENCFPGGKPGIRWYKNFLKRHPEISVREPESINKAREAVKESGIRKWFADLEVFLAERGLSDILKDPKRILNGDETGISLCPKTGKVLAPKGFKNVYTVNKGNEKETITVLIVMTAAGDICPPLVVYPYIKPPRAVVQSVPDDWVLGKTESGWMRSDVFYEYIANDFNKWLLEKEVQKPVLLFVDGHKSHMSMPLSEFCEGNDIILYALPPNTTHILQPADVSVFRPLKQNWKRTVINWQSQPENINKTVTKTNFCKVFKDTLNEDMVDTIKNGFRKCGLYPFNVNNVDFTKCVKDAQIRNSLSEPKTLNERHFTIAKAVFSLMSDNIAKLGIDPRLIISELEKTKSSYLKERRSKSRTPRNSKTPRHSRDSTLCKENTPTAVLIEESSTSIQHPCDSSLTSGNPQTLPLTEECSIQIPEIGSLVSLSEVSLMPFDEIHISDIISQNENFQIVCTASNVINSDEIHASIGRVNPTTTENLYNSNQESVPDSDGNAPMCKNKDGSTKQPEDTVNNVIVSVDVHPEPSPKRKRPIPFKENLPDINSSVFSKDISAIENDLNMINVDVHAKPTAKSIPFEKNLSDINSSVFLKDISAMENNLNIITADFDAEPTAQSTPVVIDPFQKHLKFPIPPATTKKRGFVHMPSAISGKAWRDHHEMKDKIKQEKDDLKKKRKLERDARKNDPPAKKKKKNQIAKTKNDEKQNKDRQKCSDCQDDLISDTEEDAEKNIGCDSCVRWYHLRCTSLKNLTYVEAADAEYQCEICQRVKKIRDEILKPYYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01503827;
90% Identity
iTF_01503827;
80% Identity
iTF_01503827;