Basic Information

Insect: Udea ferrugalis
Gene Symbol: -
Assembly: GCA_950022985.1
Location: OX465519.1:6485585-6493482[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3 2.9e+02 3.1 1.3 1 23 54 77 54 77 0.95

2 19 0.083 7.9 8.0 2.1 1 23 84 107 84 107 0.97

3 19 0.0022 0.21 13.0 1.1 2 23 216 237 215 237 0.98

4 19 4.9 4.7e+02 2.4 2.6 1 23 243 265 243 266 0.94

5 19 0.062 5.9 8.4 3.1 2 22 502 522 501 522 0.96

6 19 3.6 3.4e+02 2.9 1.0 1 23 620 642 620 642 0.82

7 19 0.55 53 5.4 0.3 2 23 774 795 773 795 0.96

8 19 0.003 0.28 12.6 0.5 2 23 872 893 871 893 0.96

9 19 0.98 93 4.7 1.6 1 23 901 923 901 923 0.95

10 19 0.16 16 7.1 3.2 1 23 957 979 957 979 0.95

11 19 0.00025 0.024 15.9 4.0 1 23 987 1009 987 1009 0.99

12 19 1 95 4.6 1.1 1 19 1162 1180 1162 1184 0.90

13 19 1.6 1.5e+02 3.9 0.8 1 23 1190 1212 1190 1212 0.93

14 19 0.019 1.8 10.0 0.9 1 23 1277 1299 1277 1299 0.92

15 19 0.014 1.3 10.5 1.1 1 23 1305 1327 1305 1327 0.96

16 19 0.0071 0.67 11.4 2.6 1 23 1417 1439 1417 1439 0.97

17 19 0.00018 0.017 16.4 1.4 1 23 1445 1467 1445 1467 0.99

18 19 0.49 46 5.6 1.3 1 23 1557 1579 1557 1579 0.96

19 19 0.029 2.8 9.4 4.4 1 23 1590 1612 1590 1612 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3	2.9e+02	3.1	1.3	1	23	54	77	54	77	0.95
2	19	0.083	7.9	8.0	2.1	1	23	84	107	84	107	0.97
3	19	0.0022	0.21	13.0	1.1	2	23	216	237	215	237	0.98
4	19	4.9	4.7e+02	2.4	2.6	1	23	243	265	243	266	0.94
5	19	0.062	5.9	8.4	3.1	2	22	502	522	501	522	0.96
6	19	3.6	3.4e+02	2.9	1.0	1	23	620	642	620	642	0.82
7	19	0.55	53	5.4	0.3	2	23	774	795	773	795	0.96
8	19	0.003	0.28	12.6	0.5	2	23	872	893	871	893	0.96
9	19	0.98	93	4.7	1.6	1	23	901	923	901	923	0.95
10	19	0.16	16	7.1	3.2	1	23	957	979	957	979	0.95
11	19	0.00025	0.024	15.9	4.0	1	23	987	1009	987	1009	0.99
12	19	1	95	4.6	1.1	1	19	1162	1180	1162	1184	0.90
13	19	1.6	1.5e+02	3.9	0.8	1	23	1190	1212	1190	1212	0.93
14	19	0.019	1.8	10.0	0.9	1	23	1277	1299	1277	1299	0.92
15	19	0.014	1.3	10.5	1.1	1	23	1305	1327	1305	1327	0.96
16	19	0.0071	0.67	11.4	2.6	1	23	1417	1439	1417	1439	0.97
17	19	0.00018	0.017	16.4	1.4	1	23	1445	1467	1445	1467	0.99
18	19	0.49	46	5.6	1.3	1	23	1557	1579	1557	1579	0.96
19	19	0.029	2.8	9.4	4.4	1	23	1590	1612	1590	1612	0.97

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGTACAAGTCGGCGAGGTCGGCTCTCTTGTGCGCCCCTTCGAAGGCCGCCTCTGCGGCGACGCCTCGTCGGAGGCATCTTCTGACGCAGCCGATGAAGTTGAATTACCACAGTGCAAGATAAAAAGGAATTATAATTGCACAAAGTGCACTTTCTACACGCAAAACCCGCGTGCCTTCTTAGTGCACAAACGAGAAGTGCACTTTGAAAAGTTTAAGATCTATGATTGCCCAAGTTGCGTGTACGCTTCTAGACATCATCAGAAACTAATAAGACATATAAAAATGGTTCACGGGGCAAATGCAACCCCTGCTAAGATGGATGTCGACCTACCCTCTTCCGCTGCGGAAATCACACCTGCAGACCCGGTAGAGAGCATGGAAGATTTACTCGAGGAAGTCGAAGAATGTGATGATATTGAAATTGACGTCGATGACTGTAATGAGGAACCCTTCGAGCGCTCAGCTGATATCGAGGCAGACAGGTCGCCGACACACGATGGCGCTCTACCATTGAAGAACGACGAGAAATATTTCTCTTGCACCAAATGCAGTTACGCGACCCACATAAAAGCGAGGTTCACGAAGCACGTCAAGTATCATTCGATGCCACTGAACAAGTGTACCATATGTGATTTTCGTTCACCGTACAAGTGGAATCTAGACCGCCACATGAAGAATCACGGTGGTACCGGTAGTTTCAAGTGCTTCATGTGCAACTTCACAGCGGACATCAAGCAGAGTCTGACGTCGCACGAATTGAATCATCACACGCCGCCCGTGGGCCAATCGGTTGCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACATTATGGACGCGCTCGTGTTGAAGGAGGAGGAAGGGAGCGGCGACTCGCAGTCCTCATACTCGGCTTCGGACATGGGTATGCAGTGTGCAGATAAAGATATGATAAGCTGCAACAGTGATTCGAACGATACCGCCGCTTTTGATATGGCCTGCAAAAAGGATGTTATAATGAAACCAGACTCACAAAGCCACTCGCCGAACTCAACAGATGACGCTAAATCgcaaaaaaataacagaaaaattcCTAGGCCTTTGCCCCAGCTGATACCATTGCACACGTCTACGCCGACTCAAATTAAAACTTCTCCTGGAGAACCACCTTCGAAGAAATTCAAAGAAAATCCAAGCACGAATTCGACAGACGTCATGAAAGGAAACAAGTATGATAACTTACCTGTTGACATAACTCTAATACCAGTTAACAACATTCCCAAAGAAACTGCAGGTCGTAAGAAGAACGAGTCATTTTTCGACAAACTCAAAGAAAGACTACTAACAGAAACTGGAGAGGAAGGCTCTCTTATATGCAAAAGTTGCGGTTTCGAAAGTAAATGCTTGTCAGAACATTCCGTACACGAGAAAACTTGTACCGCCCAACTTAACCGGACTGCAACCAACACGTTGCTTCCAAGTCTAAGCTCAACACGTTGCCAAAATTGTAGACATAGATGTAAATCGAGTGCAGATCTAATTATACACATGAAGACATGCCGGAAGAACGAAAAGAATGGAGATGGTTCTTTCGAAATGAAGAGTCAAGATAGCAACGACGAATTCGTTCTAACACATGAAAAAGAAATAGAACCACATCCAATGGAAAATGTCGTTTTTGTTTGGAATAACATCAATCATGACACTAATAAATTTGATATTCCGTTAGATATCAATATTAACGACGATAGCACTCTTCCAGATATGCATAGAAGTTATGATTCTGAAATAGCAGAAGATAATGAAGGCATGAATTTATCTCCAAGTCAGGCTATTGGGAAAAAGGTGTTTAAGTGTCCACACTGTCCATTTTGGGCTTCCACGGCATCAAGATTCCACGTACATATTGTCGGTCATCTTAATAAGAAACCTTTCAAATGTTCTCTTTGTAAATATAAATCGAACTGGCGCTGGGATATTACTAAACACATCAAGCTGAAGTCAGCCAGAGACCCAGATCACCTCGAGGCAAAAGTTTTAATGACTGATGAGACTGGGCGCAGAAATTACAGCAAATACAACAAATTCTTAGCCATGTCCCTTTTGAATGAAAATGGCGAAACGGTTTTCCATTACATTGACCAAAACTCTTCAGGTGAACCCACCCTCGAAAACATTGATTCGTATAATGACATGAACGAAAATTTCAATCAGCCGTTTGACATGCAGCCTCTCAATCTACAGATGTACATTAATGATCCGTTTGATAATAATACTCCAGACCAGAAGAAACCTAAGAAAACTTTATGGAAATGCAAGAAATGTAACTACAGGGACCCATCCAAGGAGGCGCTACTCGAGCACGTCCGCGAGCATTCCCGAGCAGACGGCGGCCTGGACACAGACAACAAGGTCAAGAAACCTGAGAATCTCCCTGACCCTGCGGACCTGGCGTACCGGTGTGGTCACTGCAACCAACTCTCCAACTGGAAACATGTGATACAGagACACTGCCGCTTGAAACATGATGGCGTGATAAAAGTGATAACCACAGTGAAACCAAAACCAGACCCAGCATTGACAATCAACGATATCAACACAGATACGTGCAACAAGTGTCCGTATAGAACAAGCGATAAAAAGTTACTGTTAGCACATTTGCTACAACATCAACCTTCGCCTCAGTCTATATTTAAATGCTTCTTCTGTCCTTTCTTCGTTAAAGATGACCACGAACTAATTCAACATCTTGTGCTACATGGAGTCACTGAACCCGAGGAGTACATCGCAAAAGCAATGGGCCGAAAATCTCCCCCACCTGAGATATGTCAGAACCAGCCTAACACATCAACAAAGAGACACAGATGCACCGAATGCCCGTATGAAACAAACAGCAAGTCTCAGTATATGTATCACGAGCAGTTCCACCGACTGCCAGCCGATACGCCTTACAAGTGTCCCGAATGTAACTATAGCGTGTCCAAACGACATTTGCTACATCAACACTTGAGGGTTCACGGGATAGTTACCAAGAAAATAGAATCTGAATATGATGCAAAAGCTGAAacgaaaattgaaataaatcttgatgaaattccGTACGTGTGGGTTTCAGCGAAAAATGAATTCCATAAAATGTATAAGTGTCATTACTGTTCTTATGTGAACTCACAAAAATGCAAAATTCCTAATCATGAAAAGATTCACTGCATCATTTTTGAAAACAGTGAAATAACAGGATATAAATGTTTAGAATGTAAATTTACACATGACAGTGCTATCAGACTGGCCGAACATTCAAGAAGTCATGGCGAAATATATGGTCGCATTTACTGTCCTGTAGACGAAAATATCCCTGATGAAGAACAAATCGAAAAATTGCGAAAAGTAATTGAATCGGAGAAAACTGCAAATATTGAAGGAACTCCGAAAGAAGATGAAACAGCAAGCGAAACAAGAGAAACGAAAATCTTATATTATTGTCAAAAGTGTCCAGCCCGATTTTTCACCGATGAAGAACTAAGGGGCCATGACAAGTATCATAATTTGTCATTACCACATAAATGTAAACGTTGCGAATTTTCGGTTTCTGAAGAGACAGCTCTCAGTGCTCACTTCGTCGTTCATACAGATGAATaccatacaaaaacaaaaatgcttAAGTTCATTCACAATTCGAATGCAGCGCATCAACAACCCACGCTAGAACTAATACACTGCCAATTCACATCAGATATCACCTGGGTCGTTTCAAACCCACGTAAAAATTACGATGACACTAGCCATAAGAAatcaaatgaaacaaaacaacctAAGCAATATTTTTGTAAGGATTGTCCAGCAAAATTCTTTAAGAGTTCGGCTCTTAATTATCATTCGGCATTACATGGAAGTGATGGTGACCACAAATGTAAAAAATGCAGTTATGCGGTCAAGAATGTAGGCAATTTAGCAAAACATGAGTTACTCCATGAAAACGAAGGTAAAGCGTCCACGTGTGATTATGAATCAGGAGAAGATATGGATTATAAGAATATACCTTTATCCGGAACTGATTTATTCCAAAGAAAGACTGAGGCTCAAAAAAGAGTCTTAAAGGATTCCGACAAATTAGTGAAACCAAATGACCATTTTCCTCCAGTCTTGCAAGCGGATCCTCAATTTGGATATTTGATGCACGGAAATCCAGAATTTATATACCCCACATATCTGAAAAATGGCCGTCAAAAGGAAAAACGCTACAAGTGTCATAAATGCCCCTCTGCTTTTGAAAAAAGAGAACaatacaaaatacatttatcCCTACACGGCTCCAAACAAAGGTACAAATGTGAACTATGTGATTATTCCGTAAAGTATTATGCTAATTATGTGCAACATATGAGAAAACATCAAATGAACGATGAAGCTCTAGCTGAAAGAAAGAAGACCAGCAATGATTTCACTGTTACTGAAAATCAAGAACAAACACAAGAAGTCACTGAGAATACTAAGTTCGCAATCAAAACAATGCCCAGAACTGCAAAGAGCGATTTTCAACAATTTTCAATCAGTGATCAACAAACCCTCAGACTCTTGCAACGGAGACGTTCAATTAATAACAACGGTAAAGAGCAATCTTCACTTTCTGAAAACACACCCACAAAAGACCGCAAGCTGCACATGTGCTTATTGTGTCCTTATACGAATCAGCGCCAAGATGCTTTAGCTAATCATTACAGAAGGCATGACGATAAAGATGTTCTTACCTCAGGCAATCATAAATGCTCACACTGTGACCTGGTGGTAGTACAGTCACATTTCCTAAGGGATCACCTAAAAGCTCATTTTAATTACCAAAAGAATTTGACTCCTGAATGCTTTGTGGCGAATAACGACGTGAGCTTTACGATAACTAAAGTCGATGAAGATGATGTAGCAACTGATCTCAAATTAGACATCAAAGGGAAGAAATTCAAGTgcaatgaagataaaatatttgttaaaatgcAAACAGGAGAAGTTATGGTCGAATAA
Protein Sequence: MLQQMSSPPSVQVGEVGSLVRPFEGRLCGDASSEASSDAADEVELPQCKIKRNYNCTKCTFYTQNPRAFLVHKREVHFEKFKIYDCPSCVYASRHHQKLIRHIKMVHGANATPAKMDVDLPSSAAEITPADPVESMEDLLEEVEECDDIEIDVDDCNEEPFERSADIEADRSPTHDGALPLKNDEKYFSCTKCSYATHIKARFTKHVKYHSMPLNKCTICDFRSPYKWNLDRHMKNHGGTGSFKCFMCNFTADIKQSLTSHELNHHTPPVGQSVASRRRNRVGASDIMDALVLKEEEGSGDSQSSYSASDMGMQCADKDMISCNSDSNDTAAFDMACKKDVIMKPDSQSHSPNSTDDAKSQKNNRKIPRPLPQLIPLHTSTPTQIKTSPGEPPSKKFKENPSTNSTDVMKGNKYDNLPVDITLIPVNNIPKETAGRKKNESFFDKLKERLLTETGEEGSLICKSCGFESKCLSEHSVHEKTCTAQLNRTATNTLLPSLSSTRCQNCRHRCKSSADLIIHMKTCRKNEKNGDGSFEMKSQDSNDEFVLTHEKEIEPHPMENVVFVWNNINHDTNKFDIPLDININDDSTLPDMHRSYDSEIAEDNEGMNLSPSQAIGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFKCSLCKYKSNWRWDITKHIKLKSARDPDHLEAKVLMTDETGRRNYSKYNKFLAMSLLNENGETVFHYIDQNSSGEPTLENIDSYNDMNENFNQPFDMQPLNLQMYINDPFDNNTPDQKKPKKTLWKCKKCNYRDPSKEALLEHVREHSRADGGLDTDNKVKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPALTINDINTDTCNKCPYRTSDKKLLLAHLLQHQPSPQSIFKCFFCPFFVKDDHELIQHLVLHGVTEPEEYIAKAMGRKSPPPEICQNQPNTSTKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIVTKKIESEYDAKAETKIEINLDEIPYVWVSAKNEFHKMYKCHYCSYVNSQKCKIPNHEKIHCIIFENSEITGYKCLECKFTHDSAIRLAEHSRSHGEIYGRIYCPVDENIPDEEQIEKLRKVIESEKTANIEGTPKEDETASETRETKILYYCQKCPARFFTDEELRGHDKYHNLSLPHKCKRCEFSVSEETALSAHFVVHTDEYHTKTKMLKFIHNSNAAHQQPTLELIHCQFTSDITWVVSNPRKNYDDTSHKKSNETKQPKQYFCKDCPAKFFKSSALNYHSALHGSDGDHKCKKCSYAVKNVGNLAKHELLHENEGKASTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLKDSDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEALAERKKTSNDFTVTENQEQTQEVTENTKFAIKTMPRTAKSDFQQFSISDQQTLRLLQRRRSINNNGKEQSSLSENTPTKDRKLHMCLLCPYTNQRQDALANHYRRHDDKDVLTSGNHKCSHCDLVVVQSHFLRDHLKAHFNYQKNLTPECFVANNDVSFTITKVDEDDVATDLKLDIKGKKFKCNEDKIFVKMQTGEVMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365400;
90% Identity: -
80% Identity: -