Basic Information

Insect: Udea ferrugalis
Gene Symbol: HIVEP1
Assembly: GCA_950022985.1
Location: OX465516.1:7644139-7649012[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2e-06 0.00019 22.5 2.0 1 23 749 771 749 771 0.99

2 5 4.5e-05 0.0043 18.3 3.2 1 23 777 801 777 801 0.92

3 5 7.9e-06 0.00075 20.7 0.9 2 23 1205 1226 1205 1226 0.97

4 5 0.00022 0.021 16.1 1.5 1 23 1232 1256 1232 1256 0.92

5 5 0.00098 0.093 14.1 2.6 1 23 1277 1301 1277 1301 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2e-06	0.00019	22.5	2.0	1	23	749	771	749	771	0.99
2	5	4.5e-05	0.0043	18.3	3.2	1	23	777	801	777	801	0.92
3	5	7.9e-06	0.00075	20.7	0.9	2	23	1205	1226	1205	1226	0.97
4	5	0.00022	0.021	16.1	1.5	1	23	1232	1256	1232	1256	0.92
5	5	0.00098	0.093	14.1	2.6	1	23	1277	1301	1277	1301	0.93

Sequence Information

Coding Sequence: ATGAGTACAACTCAAAAAGATATTAAAGTTGTAAGacctgaaaatatatttatgcgTAGCAATTCTGTCAACGTGCGTTTGCCGGAGACACAACAAAGTTCATTCTGCAAGACAAACGCGCCAAACGCATCGACTACCCCTCTAAAAAGCAAACCAGATAACCTTGTAATTATGAAATCGGAACCCAGTGACATTGTAGCCCCATTGCCCTCGCCGGGGCCGCTACTAGGCAACACGAGACTTGTGGATTCCAAAAGCACACTAGACATATCacgaaaaaatgaaaatatgaaaCTTAAACCTATAGCCAGCCCTAAAAGGAGAATCGATAATAGATCGGAAAGTTATAGTCCACGACTGATAGAAAATGTATCTCCTCGTTCTGCAGATTTGTATTCCCAACCGAAAATAAGATGCATCGACGTGAGTTCATCAGGCCTTGTGTCACACCACATGAGACATAACTCTACGTCGTTACAAATGTTCGGAGGCGAAGTCAAAATAGTGGATCATTCTGGGAGTACTACAACATTACGCATTGAGCCAAGTAAAAATCAATTATCTCCAATATTAATTCAACACAATTTATCTCCTTCGAAGCTAGGCAGTGATTCAGAAGCGAGTAGTATTGTAGTTAGGTCTGGTCTACACTCGGGTGGAACTATCATGCACAACCCTCCCACACCGAAGGAAGTTATTGGGACACCGCAACCTCAAACTTCTAGAATATCACTGTGTAATACTCCTGGTATTTCAAGCTCAAATTTACCAAATTTACATGATATAACTCACTTTCAATTTCCACCCCTTAGCGCTATCACTGCTTACAATCCTTTGACATTGCCTCCTCTAAGTCCATCTGCATCACCAAGCGGCGCTACAACGATTTtacatggtggaaaattgataCCTCACGTGCCAGGTATGCCAGGCCCGACTAACGCTGGAGTATTTGTCGGAAATCAATcttcacaaacgaaaatctTTCTGAATAATGACATGATCAAAAACACTACAAAGAAGATTAGAGAGGATCTTCAAAATTCAGTTACTTCAGTGGACAGCAAATATACTACAGCAAATATTCAGACAGCAAATATACTAACAGGTACTAATTATGAACCGAAACATAGTACAAGGAGTCCTAATTTAAGAGCAGTTCATATTGATAGTGAAAAACATCAACAGTCAGAAATATTCACAAGCGATGTACCACAGCATATTCCTACAGTTCCTattataaaagttaaaaatgtgGACGAACCAGAAGCACCTTGCAAAACATTTTCAACTGGTATAATGAAGTCACTAATTCCTAAGCAAGATGGAGTTTTAAAAAGAAGCATAGATGGGTCACCTAGAGCAGCTTTTCTAAAAGAAAATGTTTCCTAttcagttaaaaacaaaaataaagacagAATACATTCGATCCCCATATCCAAGGGAAGCAACATGAATAATTCTGATGCAGAAATACGGaactttaattttgaaaatttaataacaaaagTAGAAATATATAATAATCAGCTTCCAAGTCCGTCAGAACTTCAAAAGAATGCGAACGCTCAAGATAACTCTCCGTCACTACAAAACGAACGATCTGaaacattatattttcaaaaaaatattggcaCGAAATCAACACCTGAAGAAACAAAACCTAAGTTTTTAAGACCAACAACTTTACCGTTAAAACCGGGAACATTCACACCTAAAAGACATCACGGTATTACGCCTAATGCAAATACTATGTCTTTAGTTTCGCCAGAGACGCCTCGACCGGCAAAGGCTTATGGTCAACTTTACCTAAATGGTAATGCGTATACATATTTGGGACTGAAATGTTCCACTAAAGTATTTTACTGTACCATCAATCGTCCGCAACCGACTTATGTTCCAAATCAACATTTCCTGTCTATGTATAGCAACTGGCAGTTGTTATCTGAGCTAACACCAGACCCGTTCGGATTGTCAGCATCATCTGCTATGTCCCTTTACGACTCACGTCATCGACCACAAAATATGACTGTATCTGTGATGAAACACGATCTCATATTAACACATTCTTCACAATGGAAAAATTCAAGAGACAGCAAACAGgCTATAATGACAATCGACCCTAAAAAGTTAGAAGACGACAAATTGAATTGTGAAAATGGCTCTAACGCGAAAAGAGAATTAGCTGGAGGTTTCGAAAGTAACGAAGAATATACATACGTGCGTGGTCGAGGCAGAGGACGTTACGTTTGTTCAGAATGTGGAATACGCTGTAAAAAACCATCAATGCTCAAGAAACATATTCGAACGCACACTGACGTACGTCCCTACACATGTGTGCACTGTGCCTTCAGttttaaaacaaaaggaAATTTGACTAAACATATGAAAAGTAAAGCACATTACAAAAAGTGTTGTGAGTTAGGAATAAATCCCAACGAAGGCACTGATATGGAAGGAGGCGACATGAACCAATGTTCGGGTGAGACAGATGATGAAACGGATTCTGAAGGTGATGAAGGAAATGAGGGAGAAACAGAGTCCAGTGATACAGAAGTTTGCAAATCCAGACTGCCCGAACACGAAGCTGCTCATTGTTTATTGTCTTTGGGTGGATCTAGGCCGACGAGTTCTGCTGCGCCAGGGCTGCTTACTAGTGCTAGACCGACAACTTATCCATATACTCCAACAGGGCTTGAAAATGTGAATTTAGAACTTTCACCTGAAAAACTAGGGTCGAGAAGTTCTTCTGTCGATTCGAGATTAGACGCAGAAAATGAACCGATGGACTTAAGTAAAAGTGATGTAAAAATGTCTCCAAACATTCCTGAAATACCCACTGCTCGTGAGTCTAGCGTATTAGCGTCTTTGGCTTCAAATACAGCGAAACTTCCGCAACATCAAAGTCAATGGTCAAATGGTGAGCCAATGTTGCATACCTATTTAACAGAAAGAGCGCTACTAGAttccaaaataaaacaaagccaACTGACATGCAGTTTATCGAAATTAAGAAAGATAGATTTAGAGAAACCTGCATTTGTTGAGAATAGCAGCACTAAAGACGATACACAAATCGTTACAACTAAAAACTGTATAACTACTTGTATAACATCACCTAAAGTAACTGTTGTATCGAAAGTTAAAAATGAAAGTGAGGACACTTCAAAGCTAGTGTCAGTGTCTAAAGAAGAAATCAATAATGTGAGAGATGCTACTTCACCGTCTCCTGTGTTAAATGTTGATAGCAAAAAAATCACCACGGCCAGTAACACTAACGCTGAAAACGCAAAACACGTTGTCTCTGAATATCTAAAACAAGCTAGAATCAACCTCATTAAATCCCAAGATGAAATATTGAATAGTCAGATTAATCAGGATAATTCTAGTGATGAAGGTAATAACGCCAAAATAAGCAATGAAGAGAATATTCAAGGCGATGAATTACTTTTGTCAGAAGCAGACCCATTAAAGTTGCCGTCTTTAGAACATGATCCAATTgcaagaaaagttgttattggagTAGGCGGTGTCGCGTTCAAAGTGACCAAAGGAAAAGAATTTGAAAGCTCCTCATTTCCTACGGGAAGACTTATGGAAGACGGACGTCGCGTATGCGACTTCTGCAATAAAACATTTACTAAACCTTCACAACTGAGACTGCATCTCAATATTCACTATATGGAGAGGCCATTCAGATGTAGTGTATGTGCTGTGAGTTTTCGAACGAGAGGTCATCTCCAGAAACACGAGCGTTCTGGATCTCATCATAACAAAGTCTCGATGACATCAACTTTTGGCGCTGCGACATCGTTTAACCCTAGACCTTTTCGCTGTTCAGATTGCAATATTGCCTTTAGAATACATGGGCATTTAGCGAAACATCTAAGGAGCAAAATGCATGTGATGCGGCTTGAATGTCTGTTTAAATTGCCTTTTGGGACATTTACTGAAATCGAGCGCGCCGGTGTCAGTTTAACAGACATTGATACGACTGATTGCGCTAGTTCGCTTGCTAGCCTACAGTCACTTGCACGAAAGCTTCACGAGAAAGACCCAACAAAGTTGGAGTATAGGGAGCCTTCCGGTTCAACCGTGGGAAGCTTGCCCGGTCGGGACTCCTCCGAGGACGATGATGCCGGTTTACTAAGTGAAAAGACAAGTGACAGTGAAAAGGACATAGAGatgaaaacaattgataataGTGAAAGTCATGGAAAAGAAACACGAGTTAATTTTAGTGCCACAGATAATTAG
Protein Sequence: MSTTQKDIKVVRPENIFMRSNSVNVRLPETQQSSFCKTNAPNASTTPLKSKPDNLVIMKSEPSDIVAPLPSPGPLLGNTRLVDSKSTLDISRKNENMKLKPIASPKRRIDNRSESYSPRLIENVSPRSADLYSQPKIRCIDVSSSGLVSHHMRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPSKNQLSPILIQHNLSPSKLGSDSEASSIVVRSGLHSGGTIMHNPPTPKEVIGTPQPQTSRISLCNTPGISSSNLPNLHDITHFQFPPLSAITAYNPLTLPPLSPSASPSGATTILHGGKLIPHVPGMPGPTNAGVFVGNQSSQTKIFLNNDMIKNTTKKIREDLQNSVTSVDSKYTTANIQTANILTGTNYEPKHSTRSPNLRAVHIDSEKHQQSEIFTSDVPQHIPTVPIIKVKNVDEPEAPCKTFSTGIMKSLIPKQDGVLKRSIDGSPRAAFLKENVSYSVKNKNKDRIHSIPISKGSNMNNSDAEIRNFNFENLITKVEIYNNQLPSPSELQKNANAQDNSPSLQNERSETLYFQKNIGTKSTPEETKPKFLRPTTLPLKPGTFTPKRHHGITPNANTMSLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPFGLSASSAMSLYDSRHRPQNMTVSVMKHDLILTHSSQWKNSRDSKQAIMTIDPKKLEDDKLNCENGSNAKRELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGTDMEGGDMNQCSGETDDETDSEGDEGNEGETESSDTEVCKSRLPEHEAAHCLLSLGGSRPTSSAAPGLLTSARPTTYPYTPTGLENVNLELSPEKLGSRSSSVDSRLDAENEPMDLSKSDVKMSPNIPEIPTARESSVLASLASNTAKLPQHQSQWSNGEPMLHTYLTERALLDSKIKQSQLTCSLSKLRKIDLEKPAFVENSSTKDDTQIVTTKNCITTCITSPKVTVVSKVKNESEDTSKLVSVSKEEINNVRDATSPSPVLNVDSKKITTASNTNAENAKHVVSEYLKQARINLIKSQDEILNSQINQDNSSDEGNNAKISNEENIQGDELLLSEADPLKLPSLEHDPIARKVVIGVGGVAFKVTKGKEFESSSFPTGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPSGSTVGSLPGRDSSEDDDAGLLSEKTSDSEKDIEMKTIDNSESHGKETRVNFSATDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -