Basic Information

Insect: Udea ferrugalis
Gene Symbol: -
Assembly: GCA_950022985.1
Location: OX465542.1:7950924-7972628[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00037 0.035 15.4 4.9 1 23 3 25 3 25 0.98

2 17 0.0033 0.31 12.4 2.2 1 23 32 55 32 55 0.93

3 17 0.00034 0.033 15.5 0.1 1 23 63 86 63 86 0.98

4 17 0.00025 0.024 16.0 3.2 2 23 93 114 92 114 0.96

5 17 3.3 3.1e+02 3.0 0.0 1 14 120 135 120 137 0.85

6 17 0.0096 0.91 11.0 0.7 5 23 138 156 138 156 0.96

7 17 3.3 3.1e+02 3.0 0.0 1 14 162 177 162 179 0.85

8 17 0.0094 0.89 11.0 0.9 6 23 181 198 180 198 0.96

9 17 8e-05 0.0076 17.5 0.4 1 23 204 228 204 228 0.93

10 17 1.9e-05 0.0018 19.5 0.6 2 23 234 256 233 256 0.95

11 17 0.035 3.3 9.2 0.1 6 23 296 314 295 314 0.97

12 17 0.01 0.94 10.9 0.3 3 23 323 344 322 344 0.93

13 17 0.56 53 5.4 0.3 1 23 351 374 351 374 0.95

14 17 0.0019 0.18 13.2 0.7 2 23 380 402 379 402 0.93

15 17 0.34 33 6.1 4.2 1 23 752 774 752 774 0.90

16 17 0.63 60 5.3 0.9 2 23 785 806 784 806 0.95

17 17 0.0052 0.49 11.8 2.5 1 23 928 950 928 950 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00037	0.035	15.4	4.9	1	23	3	25	3	25	0.98
2	17	0.0033	0.31	12.4	2.2	1	23	32	55	32	55	0.93
3	17	0.00034	0.033	15.5	0.1	1	23	63	86	63	86	0.98
4	17	0.00025	0.024	16.0	3.2	2	23	93	114	92	114	0.96
5	17	3.3	3.1e+02	3.0	0.0	1	14	120	135	120	137	0.85
6	17	0.0096	0.91	11.0	0.7	5	23	138	156	138	156	0.96
7	17	3.3	3.1e+02	3.0	0.0	1	14	162	177	162	179	0.85
8	17	0.0094	0.89	11.0	0.9	6	23	181	198	180	198	0.96
9	17	8e-05	0.0076	17.5	0.4	1	23	204	228	204	228	0.93
10	17	1.9e-05	0.0018	19.5	0.6	2	23	234	256	233	256	0.95
11	17	0.035	3.3	9.2	0.1	6	23	296	314	295	314	0.97
12	17	0.01	0.94	10.9	0.3	3	23	323	344	322	344	0.93
13	17	0.56	53	5.4	0.3	1	23	351	374	351	374	0.95
14	17	0.0019	0.18	13.2	0.7	2	23	380	402	379	402	0.93
15	17	0.34	33	6.1	4.2	1	23	752	774	752	774	0.90
16	17	0.63	60	5.3	0.9	2	23	785	806	784	806	0.95
17	17	0.0052	0.49	11.8	2.5	1	23	928	950	928	950	0.98

Sequence Information

Coding Sequence: ATGCCCTTCAAATGCACTTTATGCGACTACGCGTGCAGAGACAGTTCCACCCTGAGGAAGCACAAGAGCCGACACACGGGCACACTGAAGATGCACCCTTGCAGCATCTGCTCTCGCCAATTCGACTCAAAATGCGGCCTGCGCGTGCACATGACGGAAGTGCACATTGAGCCAGACGTCCGGAACTACAAGTGTGAAATCTGCGACGGTGCcttcaagaagaaatgggtactCAATCAACATATTGAGACAGTGCACGCCCGCTCAAAGGCCTGCGTCTGCTCCATATGCAACGTCAAGTTGACCAACTACCACAATCTGAAGGCTCACATGAGGATACACGTCGACATCAGGCCTTTCCACTGTGCCGTTGAGGGCTGTGGCCTGACCTTCAAGGATTGGgcgggaatcgaatgcAACGTCAAGTTGACCAACTACCACAATCTGAAGGCCCACATGAGGATACACGTCGACATCAGGCCTTTCCACTGTGCCGTTGAGGGCTGTGGTCTGACCTTCAAGGATTGGgcgggaatcgtatGCAACCTCAAGTTAACCAACTACCACAATCTGAAGGCTCACATGAGGATACACGTCGACATCAGGCCTTTCCACTGTGCCGTTGAGGGCTGTGGACTGACCTTCAAGGATTGGGATACGCTGAAAAGACACGGCAAGGTCCACAACAAGAAACATCTTATATGCGACGAATGCAGGAAGCGGTTCAGCAGAAAAAACCTGTTGATTCAGCATATAAAAGTCATGCATATGCAGAGAGAGAAGACGGAGATGTGCGGCTTTTGCGGCGTTGGCCTATATTTGGGTGAGTATAGTGGCATTtcgggttgtttggaagagattgctttgaACAAGAAGCGTGATGCATGCGGGAAGTGGTTCAGCAGGAAGAACCTGCTGATTCAGCATATAAAAGTCATGCATATGCAGAGAGAGAAGACGGAGATGTGCGGCTTTTGCGGCGTTGGGTTCTACTCACAGCAGTACCTATCGAAACACATAGAACAGAAGCACAGTAGAAGGAGAAAGAAATACATTTGTGATTGGTGTGACTTTGTCACACACAACAAACCTAGCATTGTGATGCATATCAAGTATGGACATAAGTTAGATAAGGGCAAGTGCAAGATTTGCGGCAAAGCTTACAAGAAGGACAGGTACCTGAGGCTGCACTACGCGAATACTCATAAACTTAAGTTCAAAACAGACACGAAAATAGAAGACATAGAAATTCCAGATATACCAgaattaaaactaaaagaaGAACCGTTTGATTTTCCTGACATTGAGATAGACCTGCTCGACATTGACAAGGAAGAGCCGTTTGCAGGATTCGACACAGCCGACCAAGAGCTGGTCTCCGAACTGCCTGATGTCCTGGATCGGATGAGAGAGAAGGAGCAGACGTTGCAAGAGTTCTTGGACCAAGTGATGCTCAACCCTGCTGATGACGTCACTGTTGCTGCAGAAAACGGTAATGATCAACAAAGTGACCAGTGCATTCAAATGCAGAGCCTCAACCAGGAATCGAACCAAACACCTCAGGAAAGCATTTCCATGCCGGTCGAAGAGTTCATTCAGCAAATGGTTGGAGATGTAGGAGGAACGCAGGATGAAGatttCAGCTTGCCAAATACAACTTGGACAACCGACAATGACACTGATCAGCAAAGCCTAAACAAGGACTCAAACACGCCCTCTATCGACAAACTACACAATACTACTCAAACAGAACAGTCAGGACGAACAGAGGGAGATGAAATACAAGAGaaagTTTCAAACCAATCAGAAACTACTACACCACCTGACAACAACAAGCAAAAACAGAAACCTAAgaaaaagtcgaaaaacaaacacaaaaccaAACTTCAAAGAAAACCGATGCCTGTTCAAGAGTTTATACAAAAATTCGTAGGCGACAACCAAGAAACGAAAGATAAATCTGTGATAGTAGACCACGACTCGCTGGAGGCTGCTGAAAGAAGGCTGAAGGAGCTTTTGATGAAGATGAACAGAACCGATTCAGGGAAGTTGGGCGTCATGAAGTATAAGGGGAGGAAGAGTCTCAAAGTGTTCACTGAGGAGGaatttgaaaatatgaaaagTAATCCAAAATCTGGCAAAGTAACTCAAAATGATGAGGGTGACGGAAATGATGATAAAAGTGGTGACGATGATGAAAAAAGTACCGAAAAGGAAGAGACCCCGCGGATTTTGAAGTCTTTCTGGAAAATGCATCAGTGTTATATTTGTTTTAAGATATTTGATACCAAACCAAAGTTGATAGACCACTGCAAAGAACACTTCGACGTTTGCAACGAAGTGACGCTCAAAAAGTGTCCTCTCTGCGCATACGTGACCACTAAAAGCGACATCAGAAAACACCTAAGTAAGAAACACAAGGaagatataaaaatatcattcaTGGACATAAAAGAAAAACGAAACGCGACAGGCTCAAAATACTACTACAACACTGAGAATGATAAAATCAAAGAATTAGACATAATTCCGAGCATTAAAATTCTTAATAAAAAAGCTGCTATGGATCTAGACAAAAAGAACAGAGAGAAGAAAGACAAACTTGTAGGTAAGCATAAATTAGTCAAAAAAGGTAACGAATGGATAGTTGAAAAGGAAAAAATTGATCTAAGCGGACATGTTTTACCAGATTCAAAAGATTTAGACAAAAATAGCGATAATTATTTAGAAACATTACAGAAATTAGGCAAAGAAGCTAAAAGAAAAGGCGTTAAAATGCTATATCCTTGCAATAAATGCGAAAAACTATGCCAAAATCTAAGCGCTCTGACGCTACACACTCGAAAGCATGACCCAAATCCAAAACCGTTCAGACCTAGAGGCTGGATTCGTAAAGATAGAGAAAAGAGAgaaaaaattgctaaaaaacGACAAGTAGATCCAGAAAATCGTCTAGCCGACCCAAAGCCAGTTGTTAACAACCACAAGTGTGATCCTAAACTGATAGATTTCTATGAAAATAACATAAAAGGCGGCGATATAGAGTTTTGGCAGTTTTTGAAGATATACAACAAAATGGACAGAGATCATGTtaatagttttgaagatttgCAAGCAAATCCTGAGTTTGGAATACATTTGAACGCAAATAATCCGAATAATAATACAGTGGAAAATAATTCAAGTCtagaaaaaaatagtaaaaatataaaagccaAAAATAAAGTCACTCCCAAAAATGCTAATTTAATCATAGATAAGAAAGTTACGAATAAAGATAAAGTTAAGAAAGTAAATAAGAATAATATCGTAAGAACGAATCGTTTGTCTAAATTAGAACATAAAAAACGAATGGAAATCAAGAGGAAATTACGGGAAAATATATTAATAgaagaaaaatctaaataa
Protein Sequence: MPFKCTLCDYACRDSSTLRKHKSRHTGTLKMHPCSICSRQFDSKCGLRVHMTEVHIEPDVRNYKCEICDGAFKKKWVLNQHIETVHARSKACVCSICNVKLTNYHNLKAHMRIHVDIRPFHCAVEGCGLTFKDWAGIECNVKLTNYHNLKAHMRIHVDIRPFHCAVEGCGLTFKDWAGIVCNLKLTNYHNLKAHMRIHVDIRPFHCAVEGCGLTFKDWDTLKRHGKVHNKKHLICDECRKRFSRKNLLIQHIKVMHMQREKTEMCGFCGVGLYLGEYSGISGCLEEIALNKKRDACGKWFSRKNLLIQHIKVMHMQREKTEMCGFCGVGFYSQQYLSKHIEQKHSRRRKKYICDWCDFVTHNKPSIVMHIKYGHKLDKGKCKICGKAYKKDRYLRLHYANTHKLKFKTDTKIEDIEIPDIPELKLKEEPFDFPDIEIDLLDIDKEEPFAGFDTADQELVSELPDVLDRMREKEQTLQEFLDQVMLNPADDVTVAAENGNDQQSDQCIQMQSLNQESNQTPQESISMPVEEFIQQMVGDVGGTQDEDFSLPNTTWTTDNDTDQQSLNKDSNTPSIDKLHNTTQTEQSGRTEGDEIQEKVSNQSETTTPPDNNKQKQKPKKKSKNKHKTKLQRKPMPVQEFIQKFVGDNQETKDKSVIVDHDSLEAAERRLKELLMKMNRTDSGKLGVMKYKGRKSLKVFTEEEFENMKSNPKSGKVTQNDEGDGNDDKSGDDDEKSTEKEETPRILKSFWKMHQCYICFKIFDTKPKLIDHCKEHFDVCNEVTLKKCPLCAYVTTKSDIRKHLSKKHKEDIKISFMDIKEKRNATGSKYYYNTENDKIKELDIIPSIKILNKKAAMDLDKKNREKKDKLVGKHKLVKKGNEWIVEKEKIDLSGHVLPDSKDLDKNSDNYLETLQKLGKEAKRKGVKMLYPCNKCEKLCQNLSALTLHTRKHDPNPKPFRPRGWIRKDREKREKIAKKRQVDPENRLADPKPVVNNHKCDPKLIDFYENNIKGGDIEFWQFLKIYNKMDRDHVNSFEDLQANPEFGIHLNANNPNNNTVENNSSLEKNSKNIKAKNKVTPKNANLIIDKKVTNKDKVKKVNKNNIVRTNRLSKLEHKKRMEIKRKLRENILIEEKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -