Ufer019773.1
Basic Information
- Insect
- Udea ferrugalis
- Gene Symbol
- Zfy1
- Assembly
- GCA_950022985.1
- Location
- OX465533.1:616365-621150[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.017 1.6 10.2 0.8 1 23 271 293 271 293 0.96 2 13 1.2 1.1e+02 4.4 1.2 3 23 335 356 333 356 0.93 3 13 2.9e-07 2.8e-05 25.2 1.1 2 23 382 403 382 403 0.97 4 13 0.00021 0.02 16.2 1.9 1 23 410 433 410 433 0.95 5 13 0.15 14 7.3 0.3 1 23 439 461 439 461 0.91 6 13 0.00016 0.015 16.6 2.0 1 23 467 489 467 489 0.98 7 13 0.16 15 7.1 3.2 1 23 627 649 627 649 0.96 8 13 5e-05 0.0047 18.2 4.5 2 23 656 678 655 678 0.92 9 13 0.00056 0.054 14.8 3.1 1 23 684 706 684 706 0.97 10 13 1.9e-06 0.00018 22.6 4.6 1 23 712 734 712 734 0.98 11 13 0.0012 0.12 13.8 2.8 1 23 740 762 740 762 0.97 12 13 9.2e-05 0.0088 17.3 1.5 1 23 768 790 768 790 0.96 13 13 3.4e-05 0.0033 18.7 1.8 1 23 796 819 796 819 0.97
Sequence Information
- Coding Sequence
- ATGAATAACGAAACAGAAGGAATATTTATAATCACTCCACCTGCGAACCAGCCGCCTGCTACGTCCCAAAAGCTTGAAGAAGCTTCTGTAACGACACCGCAAGATGTAGAAGACTTCTCCACAGTATGTCGGACATGTGCCACTGTCACTGAGTTTGTTATCCCTATATTTGATGGTGAGGGTCTTCAGAACAACCTAGCTGAGAAGATACACAAACATTTACCTATAAGAGTGTGTGAAACAGATATCCTCCCACGAGTAGTATGCTACCAATGTGCCAGCACACTTCTAGCATGGCACGAACTAGTCCAGTGCTGTGTGCAAGCAGACGCGGCCCTGCGCACGCGGCTCGCTGTGTGCGCAGCCGCTGCCGTCGCCAGTGCTGATAATACTCCTCAAGAAAAGCCTCTGgaATCGGAATGTAGTAGTAAAGAAGCCCAAAATACAGAAAATGAACAACAGAACAAGTCTCTACTCAGTATATGCGCCCTGCTTAAAAACTTACTGACTGAGTACTATCCCACATCAATGAATGGTGAAAATCTAGACATAAAGGTTGTCTGCCAAAAATGTGAAACTCTCCCTCCTGCGGATACCGTACAACAATTGGCTGATCACTTAATAGTTGCTCATCCTGAGATTGCTGATGCGTCAGCCGTCAGAGAGTTTATCAAAAACTATGTAATGTTCGAAGAAGCTCTGATATTTGAAGATTCCGACAAAGATGGTAGGTCAGATACTATAGAAAATACCCCAGACAGAGATGTACTATCAGAATCAATAGAAGAACCGGCAGAAGTTTTGCCAAGTTTCTTTTGTCCTTTCTGCAAAAGTGTATTTTCTTCAACGGCGCGACTGGCCTCTCATCTCAACCAACACATGGAATTGTCTTTAGAAAAGGGCGTGTCGTGCTGCGACAACACTTACTACACTACGAAAATGTTTGTGAATCATGTTCAAGAAAATCACATCTCTCGTGTACTGAGCGATTCGAAAGTACACTGCCGAACCTGTGGATTCGAAGCTGAAGATCTTCAGGAGCTTAGACATCATATCTCTCAAGAACATACAGAAATTAAATCTGTTGAAATGACAAAACAGGACAAGGAGCCTAGCGGCAAGAATCAGAAGTTTATCCCGGCCGTGTGTCCCGAATGTAACAAAACATTCTCTAACAAATACAACATGTTCGTCCATATGAAGAGTCACAAGGCAGAGACGTTGAAGTTCTATTGCGACAGATGCAGCAAGAGGTACAGCAATCAAGGGAGTTTAACTAATCATAAAAAACTAGCTCATGAGGGAGTATTAAAGTTCGTGTGCTGTACTTGCGGAGAAGCGTTTCCTTCGAAATTGGCGCGCGATGTTCACGCCCGACTGCACTCGGGGGACACTCCGTTCCAATGTAAGTTCTGCGAAAAGTCCTTTCGCGCTAAGAACACCCTCGATCGCCACCTTGAAATGCATTTAGACATAAGAAACTTCGCGTGGAACTGCAGCTTTAAAAATAATCCTGCGCCCTGCGACCCTGGTGCACTTGCTTCCACAGACTGCGATATAGATGAGGACGAAGATGACGAACCACTCTCAAGCATAGCGAGCAGAAAGCCTGCGAATGTGTACACCAACTTTTACAATGCcttattaaattttagaaatcaCTTTGCAAATGAACATGGTTCACAGAAGCGCAAGTATCCAGAATTTACAGATTCGAGTGATTCAGAAAAAGCGAGTGGTGAGGAAAATGAGACTGAAGAATTGAACGTAGATAACTATGATGATCTGACACATTGTAACATGAGAAAAGATAAGATGGACGAAGAAACTCGAATAGAATTGAGCCAAGTCCGAACAAAAATTAACGGGAAAGTTTATTATACTTGCCAGCTGTGCGGTAAGAACTTGAGTTCCTCACACACTTATGTGTTTCATAAACGTATTCACACCGGAGAGCGTCCCTGCGTATGTCATATATGTGGCAAACAATTCCGCTCGCCGAGTGGATTACATAGACATTTGACAGAAACTCACGATCGGGTTCGACGCCATTCTTGTCGATTATGTTTGAAATATTTCGCAAACTCTCAGAATTTGAAACAGCATCTTCGCATTCATACGGGCGAGAAGCCGTTCGTGTGTTCTCATTGCGGCAAACGGTTCACGCAGAGTGGTACGCTACACGTCCATCTGAAGACTCATAGTGAGCATTTCCCTCACCAGTGCGCGGAATGTGGATCGAAGTTTAGGCTACGGTCTTCTCTGACGAGACATAGTTTGAAGCATACTGGAGAGAGACCGCACGTTTGTGTGCAATGTGGGAAAGGCTTCCGCCAGAGACATGAGCTCGCAAACCACGCTCTCTCACACACAGACGCGAAGCCCTTCAGCTGCTCCGTCTGCGGCGTCGCGTTCCGGCAGCGGCGGGCCTTGCGCCATCACACCAAACGGGTGCACGAACTAACTGAACCGCCTAGAGGAATCTCTCATCCTTTAGTTTATACACATGTTTTGAATTATTAG
- Protein Sequence
- MNNETEGIFIITPPANQPPATSQKLEEASVTTPQDVEDFSTVCRTCATVTEFVIPIFDGEGLQNNLAEKIHKHLPIRVCETDILPRVVCYQCASTLLAWHELVQCCVQADAALRTRLAVCAAAAVASADNTPQEKPLESECSSKEAQNTENEQQNKSLLSICALLKNLLTEYYPTSMNGENLDIKVVCQKCETLPPADTVQQLADHLIVAHPEIADASAVREFIKNYVMFEEALIFEDSDKDGRSDTIENTPDRDVLSESIEEPAEVLPSFFCPFCKSVFSSTARLASHLNQHMELSLEKGVSCCDNTYYTTKMFVNHVQENHISRVLSDSKVHCRTCGFEAEDLQELRHHISQEHTEIKSVEMTKQDKEPSGKNQKFIPAVCPECNKTFSNKYNMFVHMKSHKAETLKFYCDRCSKRYSNQGSLTNHKKLAHEGVLKFVCCTCGEAFPSKLARDVHARLHSGDTPFQCKFCEKSFRAKNTLDRHLEMHLDIRNFAWNCSFKNNPAPCDPGALASTDCDIDEDEDDEPLSSIASRKPANVYTNFYNALLNFRNHFANEHGSQKRKYPEFTDSSDSEKASGEENETEELNVDNYDDLTHCNMRKDKMDEETRIELSQVRTKINGKVYYTCQLCGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRSPSGLHRHLTETHDRVRRHSCRLCLKYFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGTLHVHLKTHSEHFPHQCAECGSKFRLRSSLTRHSLKHTGERPHVCVQCGKGFRQRHELANHALSHTDAKPFSCSVCGVAFRQRRALRHHTKRVHELTEPPRGISHPLVYTHVLNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -