Ufer029224.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Udea ferrugalis
Gene Symbol
-
Assembly
GCA_950022985.1
Location
OX465545.1:2752274-2764942[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 6.6 6.3e+02 2.0 1.6 1 23 48 72 48 72 0.82
2 25 0.03 2.8 9.4 0.2 1 23 143 165 143 165 0.97
3 25 0.013 1.2 10.5 0.3 1 23 169 191 169 191 0.92
4 25 0.0091 0.87 11.0 0.2 1 23 196 218 196 218 0.93
5 25 0.63 60 5.2 5.1 1 23 224 247 224 247 0.92
6 25 2.7e-05 0.0026 19.0 1.1 2 23 258 280 257 280 0.96
7 25 0.00061 0.057 14.7 2.9 1 23 286 308 286 308 0.97
8 25 4.8 4.6e+02 2.5 0.2 1 23 535 557 535 557 0.93
9 25 0.0084 0.8 11.1 0.3 1 23 561 583 561 583 0.96
10 25 0.26 25 6.5 1.3 1 20 588 607 588 611 0.88
11 25 0.25 24 6.5 1.9 2 23 619 641 618 641 0.91
12 25 6.5e-05 0.0062 17.8 1.4 2 23 649 671 648 671 0.97
13 25 0.015 1.4 10.4 1.2 2 23 678 699 677 699 0.96
14 25 2e-05 0.0019 19.4 3.1 1 23 705 727 705 727 0.99
15 25 0.00014 0.013 16.8 5.5 1 23 733 756 733 756 0.98
16 25 0.47 45 5.6 2.4 1 23 855 880 855 880 0.92
17 25 1.2 1.1e+02 4.4 0.3 1 23 906 929 906 929 0.92
18 25 0.69 66 5.1 3.4 1 23 951 973 951 973 0.97
19 25 3.4e-05 0.0032 18.7 0.9 1 23 977 999 977 999 0.97
20 25 0.2 19 6.8 2.8 1 23 1004 1027 1004 1027 0.83
21 25 2.7 2.6e+02 3.2 0.1 1 23 1034 1057 1034 1057 0.89
22 25 0.0045 0.43 12.0 1.4 1 23 1065 1088 1065 1088 0.98
23 25 0.0062 0.59 11.6 3.5 1 23 1094 1116 1094 1116 0.95
24 25 5.8e-06 0.00055 21.1 0.8 3 23 1123 1143 1121 1143 0.97
25 25 0.00018 0.017 16.4 2.7 1 23 1149 1172 1149 1172 0.98

Sequence Information

Coding Sequence
ATGACAAGAGAGGAAAAGTCAATAGCTAAGAGGATGACTGAAAGGAAAAATGCTCGCGAGATGGAGAAACATCTACAAAATATTAGAGAGATTCTGTTGGGTACTAATGGCACTCCAATAAGATCTTTTGACGGTCTCGGATACACGTGCTGTTTTTGCTACGAAGGCTCGTTTTCTAGCTTACCAGAATTGAAAAAACACACGTTAGCGACACATACCGATTGCGAGAAGAAAAATTTCGCCAACAATTCACTAATATACAGTTATTTAGTAAAACTCGATATCACGGGGTTTCAGTGTTTACTATGCCGAAGCGATATCGATTGTTTAGAAGATATGATGAAACACTTGTCATCCATACATGGGAAAAAACTGTACATAGGTATAAAAAATCGCATCCTTCCCTTCAAAAACGAAAATGGTCATTTCCCATGTGTTCTCTGCGTAAAAAAATTCGCCAGTTTGAAAGGTATGATGGAGCATTTGAACTCGCACTACAAAAATTACTCTTGCAAGATTTGTGGCGCCACTTTTGTAACGGAACGGAACTCACGGGTTCATAGTGCCCGTCACAAGCGCGGAAAGTTTCCTTGCAAGGAATGTGCCAAAGTATTTGATACAAAAGTGGAAAGAGAGAAGCACGAGGGATCACACCCTGGTGTTAAAAAGCACAAATGTCCCACCTGCCGTCAAAAGTTCGAGAGTTATCACAAAAAGATGAAACATATGGTGGAAGACCATGGAAAAGAGAAAGAGAAACCACTTATGCAACGATGCAACGCATGCGACAAGTCTTTCCCTACTAAAAGTATGCTGAGCGCACATACAAGGAGATACCATTTAATGGAGAAGAAACATAAGTGTAAAATTTGCGATAAAAGGTTCTTCGCCTTAAGGGATTTAAACCGACATTTGGTGCGGCACACAGgtATCGGCAGAGTTACGGGCAAAGTAGGTACTGTaagtaaatcaataaaaaatcttaAGTCTGAAACGGATATTAAAAGAGAGCCGAAGGATGACGAGAAAGTTACTAAAGAGAAAATCTTAATGTCTAAGAAGATGATTAAAAGAAACACGGGCAAAGTAGGTACTGTAGATCCAcctgtaagtaaattattaaaaaatcttgAGTCTGAAACGGAGACTAAGAGAGAGCAGAAGGATGACGGCAAAGTTACTAAAGAGGAAATCCTAATATCTAAGAGAATGATTAAAAGGAATAATGTTCGCGAGATGGAAAAACATCTACAAAATATAAGAGAGATACTATTGTGTACTAATGGCACTCCAATAAGAACTTTTGACGGTCTAGGATACACGTGCTGTTTTTGCTACGAGGGCTCGTTTCCTATTTTACCAGAATTGAAAAAACATACGTTAGCGACACATACCGATTGCGAGAAGAAACAATTCGCTAACAAATCAACAATATCCACTTATTTAGTAAAACTCGATATCACGGGGTTTCAGTGTTTACTATGCCAAAGCGACATCGATTGTTTAGAAGATATGATGAAACACTTGTCATCCAACCATGGAAAAAAACTGTACTTAGGTATAGAAAATCACATCCTTCCCTTTAAGTACGAAGGTGGCCTATTCCCATGCGTTCTCTGCCCGAAAAAAATCGAGCGTTTCAAAGTTATGATGGAGCATTTGAGCTCGCACTACAGAAATTACTTTTGCAAGATTTGTGGCGCTACTTTTGTAACGGAACGAACTTCACGGGCTCATATTGCCCGTCACAAGCGCGGAGAGTTCCCTTGTAAGGAATGTGCCAAAGTATTCGATACAAAAGTGAAAAGAGTGGTTCACGAGAGATGTGTACACGCTGGTGAAACAAAGCGGAACAAATGTCCTATCTGCTTTCAAAAGTTCGAGACGTACCACAAAAAGACGGAGCATATGGTCGAGGAACATGGAAAAGAGAGAACATATAACAAATGCAATGCGTGTGACAAGTCTTTTGCTAGTAAAGGAATGCTGAGTAAACATACAAGAAGATATCATTTACTGGAGAGGAAACAGGAGTGTCAATTTTGCGATAAAAGGTTCTTCGCCATGAGGGAATTGAAACAACACTTGTTGTCGCACTCAGGTATAAAAGAGTTTCAATGTGAGGTGTGCCAGAAGTCTTACGGGCGTAAATGTACGCTTCGTGAGCACATGCGGATTCATCTGGATGAAAGGAGGTTCAAGTGCGAGCACTGCGACCAGGCGTTCGTGCAAAAGTGTAGTTGGAAGAGCCATATGCGATCACGTCATGgTAATGGCAGAAAAACGGCCAAAGTAGGTAATGTAGATATATCTGGAAGTCAAACATTCCAAGTATTCCAAAGGattgaaactgaaaataaaatcacaaaaaagcaAGACGACTGGAAAATCACCATAAAAAAGAACTTTACAACacatgtaaatgtaaaaaaacctgTAAATGTAAAAATTCATCCTGGCGTATTGAAACCGTTTCTAGAAATCGATAAACATGTTCACAACATAAGACAGATTTTGCTTTATACGAATGGCACTCCGATAAGAACGTTCGACGGCCTAGGGTATTCGTGTGGCTTCTGCACCCACGGCAAATCGTATACCGACATACATGATCTGAAAGAACACACATTAACCGCACACGACGATTTGGAGAAGGAAAATTTTGCAGACAAATCAACTATGTCCACATATTTAGTCAAACTCGACATCTCAGGTTTCAAATGCTCCTTGTGTCAGAAGAACATCGAATCATTAGAAGTAATGATGACGCACTTATCTTCGGAACATGGAAAGAAACTATTTATGAAAATTGATAACCACATCCTACCATTCAAATTTAAAGACGGCTTGTTTCACTGCGTCCATTGTCCAAAATCTACAGAGCGTTATAAGGTTATGCTGGAGCATTTGAATTCACATTACAGCAACTTCAACTGTCAGATCTGCGGTGCGACTTTTGTGACGGAGCGAAATTTAGCCATGCATATGCATCGCCATAGACGAGTTGCTTACCAGTGCAAACATTGCACAGAGGTTTTCGACACGAAGTTGAAGAGGGACACCCACGAGCGAGACACGCATGGTGGTGTTCAGAAACGGTATAAATGTGCAATATGCCTGGAAAAGTTCGTGTTGTACGCACAGAAAATTGGCCATATGGTCAAAGAGCACGGTATGGAGCGGATGAGTAATTACAAATGCAACGCGTGCACCAAGTCCTTTCAAAGCGAAATTAAATTAAGCGAACATACGAGGAAAGAGCATTTGTTAGAGAGGAATCACCGATGTCAATTttgcaacaaaacattttttgcaACTAGGGAATTAAAGCGTCACATGGTGGCTCACACAGGGGAAAAAGTTAATTGCGAGTTGTGTCAGAAATCATTCGGGCAGAAAAGAACCCTTAAGGCGCATATGCGAATTCACATGAACGATAGGCGGTTTAAGTGCGAGTATTGTGAGAAAGCCTTCGTGCATAAGGTCAGCTGGAAGAGCCACACGCTGACCCGTCATGGCTTCGATGTCAACGTCGGAACTAGTAATAGTGGTGTTTCGGAAAGTCGTTCTTAA
Protein Sequence
MTREEKSIAKRMTERKNAREMEKHLQNIREILLGTNGTPIRSFDGLGYTCCFCYEGSFSSLPELKKHTLATHTDCEKKNFANNSLIYSYLVKLDITGFQCLLCRSDIDCLEDMMKHLSSIHGKKLYIGIKNRILPFKNENGHFPCVLCVKKFASLKGMMEHLNSHYKNYSCKICGATFVTERNSRVHSARHKRGKFPCKECAKVFDTKVEREKHEGSHPGVKKHKCPTCRQKFESYHKKMKHMVEDHGKEKEKPLMQRCNACDKSFPTKSMLSAHTRRYHLMEKKHKCKICDKRFFALRDLNRHLVRHTGIGRVTGKVGTVSKSIKNLKSETDIKREPKDDEKVTKEKILMSKKMIKRNTGKVGTVDPPVSKLLKNLESETETKREQKDDGKVTKEEILISKRMIKRNNVREMEKHLQNIREILLCTNGTPIRTFDGLGYTCCFCYEGSFPILPELKKHTLATHTDCEKKQFANKSTISTYLVKLDITGFQCLLCQSDIDCLEDMMKHLSSNHGKKLYLGIENHILPFKYEGGLFPCVLCPKKIERFKVMMEHLSSHYRNYFCKICGATFVTERTSRAHIARHKRGEFPCKECAKVFDTKVKRVVHERCVHAGETKRNKCPICFQKFETYHKKTEHMVEEHGKERTYNKCNACDKSFASKGMLSKHTRRYHLLERKQECQFCDKRFFAMRELKQHLLSHSGIKEFQCEVCQKSYGRKCTLREHMRIHLDERRFKCEHCDQAFVQKCSWKSHMRSRHGNGRKTAKVGNVDISGSQTFQVFQRIETENKITKKQDDWKITIKKNFTTHVNVKKPVNVKIHPGVLKPFLEIDKHVHNIRQILLYTNGTPIRTFDGLGYSCGFCTHGKSYTDIHDLKEHTLTAHDDLEKENFADKSTMSTYLVKLDISGFKCSLCQKNIESLEVMMTHLSSEHGKKLFMKIDNHILPFKFKDGLFHCVHCPKSTERYKVMLEHLNSHYSNFNCQICGATFVTERNLAMHMHRHRRVAYQCKHCTEVFDTKLKRDTHERDTHGGVQKRYKCAICLEKFVLYAQKIGHMVKEHGMERMSNYKCNACTKSFQSEIKLSEHTRKEHLLERNHRCQFCNKTFFATRELKRHMVAHTGEKVNCELCQKSFGQKRTLKAHMRIHMNDRRFKCEYCEKAFVHKVSWKSHTLTRHGFDVNVGTSNSGVSESRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-