Ufer028551.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Udea ferrugalis
Gene Symbol
-
Assembly
GCA_950022985.1
Location
OX465544.1:1853562-1914528[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 2.8e-06 0.00026 22.1 0.5 1 23 195 217 195 217 0.98
2 34 0.0014 0.13 13.6 1.1 1 23 223 246 223 246 0.95
3 34 1.5e-05 0.0015 19.8 0.4 1 23 252 274 252 274 0.98
4 34 3.7e-05 0.0035 18.6 3.6 1 23 280 302 280 302 0.99
5 34 2.8e-06 0.00026 22.1 0.5 1 23 365 387 365 387 0.98
6 34 0.0014 0.13 13.6 1.1 1 23 393 416 393 416 0.95
7 34 1.5e-05 0.0015 19.8 0.4 1 23 422 444 422 444 0.98
8 34 3.7e-05 0.0035 18.6 3.6 1 23 450 472 450 472 0.99
9 34 2.8e-06 0.00026 22.1 0.5 1 23 535 557 535 557 0.98
10 34 0.0014 0.13 13.6 1.1 1 23 563 586 563 586 0.95
11 34 1.5e-05 0.0015 19.8 0.4 1 23 592 614 592 614 0.98
12 34 3.7e-05 0.0035 18.6 3.6 1 23 620 642 620 642 0.99
13 34 2.8e-06 0.00026 22.1 0.5 1 23 705 727 705 727 0.98
14 34 0.0014 0.13 13.6 1.1 1 23 733 756 733 756 0.95
15 34 1.5e-05 0.0015 19.8 0.4 1 23 762 784 762 784 0.98
16 34 3.7e-05 0.0035 18.6 3.6 1 23 790 812 790 812 0.99
17 34 2.8e-06 0.00026 22.1 0.5 1 23 875 897 875 897 0.98
18 34 0.0014 0.13 13.6 1.1 1 23 903 926 903 926 0.95
19 34 1.5e-05 0.0015 19.8 0.4 1 23 932 954 932 954 0.98
20 34 3.7e-05 0.0035 18.6 3.6 1 23 960 982 960 982 0.99
21 34 2.8e-06 0.00026 22.1 0.5 1 23 1045 1067 1045 1067 0.98
22 34 0.0014 0.13 13.6 1.1 1 23 1073 1096 1073 1096 0.95
23 34 1.5e-05 0.0015 19.8 0.4 1 23 1102 1124 1102 1124 0.98
24 34 3.7e-05 0.0035 18.6 3.6 1 23 1130 1152 1130 1152 0.99
25 34 1.9e-05 0.0018 19.5 2.6 1 23 1158 1180 1158 1180 0.99
26 34 2.1e-06 0.0002 22.5 1.1 1 23 1186 1209 1186 1209 0.95
27 34 1.7e-05 0.0016 19.6 1.5 1 23 1215 1237 1215 1237 0.98
28 34 7.6e-05 0.0072 17.6 1.0 1 23 1243 1265 1243 1265 0.98
29 34 0.0029 0.27 12.6 2.0 1 23 1271 1293 1271 1293 0.99
30 34 4e-07 3.8e-05 24.8 0.7 1 23 1299 1321 1299 1321 0.98
31 34 2.6e-06 0.00025 22.2 0.7 1 23 1327 1349 1327 1349 0.98
32 34 0.045 4.3 8.9 1.0 1 23 1355 1374 1355 1374 0.95
33 34 4.4e-06 0.00042 21.5 0.7 1 23 1380 1402 1380 1402 0.98
34 34 0.00051 0.048 15.0 4.4 1 23 1408 1430 1408 1430 0.98

Sequence Information

Coding Sequence
ATGACTGACACGTGGAGCGTAAATGGCCTTTGTCGGTGTTGTCATACAGAGGGAAATTTCAAGAGCCTAGGAGTCTCTTATTCTTATGAAGGAATAGACGAAGTTTTTTCTGTGATGCTTCGCgatacttttcaaataaacCTAGTGCCAATAGCAGGGGAAGTCGGTGCCGGCACTTACAGTATTTGCATGGCCTGTGAACCTCGCCTTAGAGATGCAGCACTCTTCAAAAAGCAAGTGCTTGTGTGCGAAGAGAAATTCCAGCAGTATTATCAACAGCACAGATTCGAAAGTGCTGAACATTTTATTGGAGAAGTTAAAGTTGAATCTTTTAGTTCTCTTGGTCCCAAAGCAGAGGTTTCCTTCATTGAGGATGAGAAAGATATCAAATATGATGATGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGAAGAATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGACGGATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGACGGATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGACGGATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGACGGATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGATGACAAACTACCCTCAATGGAGATATTCATTCGACCGGAGAAGCCGATTCGCCCGCGTCGGTGTAAGAAGAAAGAGACAGAGAACATCGTCGACGGATCGGACGACGGTGATTGGTCGCCGGGACCGGCTGACGACCATGAGTATGAAGAAACTCCAGCACAGAAAGAGAAGTCTAAAAAATTCTCCTGCACCGTCTGCGAGAAACAGTTCACCTACAACGGATCTTTAGAAGTCCACATGAGAATTCACACCGGAGAAAAAACCTACGAATGCCAACTTTGCAACtcaaaatttgtcaaaaacaaGGATTTGACAAAACACATAGAACAGAGTCACTGCAAAAACGACGCATATCCTTGCACTATATGCCAAAAACCTTTCGACAAACCAAGACTTTTGAAAAAACACGTTAAAATTCACTTCGACGTCGAAAAATTCAAATGCAGTTATTGCAGTAAAGAGTTTCAACGGAAAAAAGGATTGAAAGAACATCTAAAAACGCATACAGGTGAAAGAAAATATTCATGTGAGGTATGCAGCAAATCGTTCGGACATAACCAGACTTTGAAATCTCATATGTTAACTCATACTGGTGAACGACCGTATGTTTGTGACGTTTGTGGAAGAAGATTCCCTCAACGGACACATTTGAAAAGGCATATCTTTATAATACACACTGGCGTTAAGCCTTTTTCTTGTAAAGTATGTAAGAAAGAATTCTCAAGCAAGAGTTATTTAGCTATACATGAAAGACAGCATACTGGTGAACGGCCGTTTTCTTGTGAAGTCTGCAAGAAGGATTTCAGAGCGTATACTACTCTGAAAGTTCATATGAGAGTACATACTGGACTCAAACCTTACACTTGCAGCTTCTGCAGTCGTCAATTCGCTCAAATGGCTAGCTTCAAACTCCATGAGAGAACTCATACAGGTGAACGGCCATTTTCCTGCAAAGTTTGCAAAAAACCGTTCTCTGACAACGGATATTTGAAAATTCACATGAGAGTACACACCGGGGAGAAACCATATCCTTGTGAGATTTGCAAAAGAAATTTCAGAGAGACTGGACAATTGAAAAGGCATATGAGAGTCCATACTGGAATTAAGCCTTATACTTGCAAGATTTGCAACAAACAGATTGGAAACTTATCTAAACATATGCGGGTACATTCAGACGAAAGACCTTACAATTGTACTGTTTGTAATAAACAGTTTTCTATAAGTGGCAACTTAAAGTTGCATATGAGGATACATACAGGGGAAAGGCCCTTTTCTTGTGAACTTTGCAATAGTCAGTTTACTCAGAGTAGCGGTTTGAAGAGACATAGGTGCACTCATGTAGGGAAAAACGATAGCTAa
Protein Sequence
MTDTWSVNGLCRCCHTEGNFKSLGVSYSYEGIDEVFSVMLRDTFQINLVPIAGEVGAGTYSICMACEPRLRDAALFKKQVLVCEEKFQQYYQQHRFESAEHFIGEVKVESFSSLGPKAEVSFIEDEKDIKYDDDDKLPSMEIFIRPEKPIRPRRCKKKETENIVEESDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTDDKLPSMEIFIRPEKPIRPRRCKKKETENIVDGSDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTDDKLPSMEIFIRPEKPIRPRRCKKKETENIVDGSDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTDDKLPSMEIFIRPEKPIRPRRCKKKETENIVDGSDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTDDKLPSMEIFIRPEKPIRPRRCKKKETENIVDGSDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTDDKLPSMEIFIRPEKPIRPRRCKKKETENIVDGSDDGDWSPGPADDHEYEETPAQKEKSKKFSCTVCEKQFTYNGSLEVHMRIHTGEKTYECQLCNSKFVKNKDLTKHIEQSHCKNDAYPCTICQKPFDKPRLLKKHVKIHFDVEKFKCSYCSKEFQRKKGLKEHLKTHTGERKYSCEVCSKSFGHNQTLKSHMLTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHTGVKPFSCKVCKKEFSSKSYLAIHERQHTGERPFSCEVCKKDFRAYTTLKVHMRVHTGLKPYTCSFCSRQFAQMASFKLHERTHTGERPFSCKVCKKPFSDNGYLKIHMRVHTGEKPYPCEICKRNFRETGQLKRHMRVHTGIKPYTCKICNKQIGNLSKHMRVHSDERPYNCTVCNKQFSISGNLKLHMRIHTGERPFSCELCNSQFTQSSGLKRHRCTHVGKNDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-