Basic Information

Insect: Udea ferrugalis
Gene Symbol: RTase
Assembly: GCA_950022985.1
Location: OX465519.1:2072249-2085682[-]

Transcription Factor Domain

TF Family: TEA
Domain: TEA domain
PFAM: PF01285
TF Group: Helix-turn-helix
Description: The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.012 2e+02 3.2 0.0 34 51 877 894 858 898 0.83

2 8 0.013 2.3e+02 3.1 0.0 34 51 917 934 907 938 0.83

3 8 0.013 2.3e+02 3.1 0.0 34 51 957 974 947 978 0.83

4 8 0.013 2.3e+02 3.1 0.0 34 51 997 1014 987 1018 0.83

5 8 0.013 2.3e+02 3.1 0.0 34 51 1037 1054 1027 1058 0.83

6 8 0.013 2.3e+02 3.1 0.0 34 51 1077 1094 1067 1098 0.83

7 8 0.013 2.3e+02 3.1 0.0 34 51 1117 1134 1107 1138 0.83

8 8 0.013 2.3e+02 3.1 0.0 34 51 1157 1174 1147 1178 0.83

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.012	2e+02	3.2	34	51	877	894	858	898	0.83
2	8	0.013	2.3e+02	3.1	34	51	917	934	907	938	0.83
3	8	0.013	2.3e+02	3.1	34	51	957	974	947	978	0.83
4	8	0.013	2.3e+02	3.1	34	51	997	1014	987	1018	0.83
5	8	0.013	2.3e+02	3.1	34	51	1037	1054	1027	1058	0.83
6	8	0.013	2.3e+02	3.1	34	51	1077	1094	1067	1098	0.83
7	8	0.013	2.3e+02	3.1	34	51	1117	1134	1107	1138	0.83
8	8	0.013	2.3e+02	3.1	34	51	1157	1174	1147	1178	0.83

Sequence Information

Coding Sequence: ATGAAATTACAAAATCTTGATGTGCTACTGATCTCTGAAGCTCATCTTACAGACAAACTATCATTCCACATAAATGGCTTTAACACTTATGCAACTTACCATCCGAGCGGTTCAGCACATGCTGGCACAGCAATAATAATCAGACAAAGTATAAACCATCAATTACTACCAGAATTTCAGACTGACAAAATACAAGCCACGTCGATACTGATTTACGACAAGCAAAGTCCGATTACACTATCATCTGTGTACTGCCCTCCAAAACAAAATCGAAACCCTGAAACAGTTGAAGAGGATTTTAACGCCTATTTTGAGTCACTAGGCAACCGGTTCATAGCAGGAGGTGATTGGAACTCGAAACACACAATGTGGGGCTCGCGTCTTATCACAACCAGAGGCCGAAACCTCCACAAGTGCTTAAGAAGACGGCGTCTCAATATTCTTTCAACTGGACAACCAACTTATTGGCCTGCTGACCCAGCTAAATTACCAGACTTATTAGACTTCTTCATCTACAAGGGAGTACCAACACATTTTTTGGATGTAGAAAGTTGCTTTGACTCGTCATCAGACCACACCCCAGTAATTGCAACCGTAAGTTCTACAATAATAAAGAGAGCTGTCCCTCCATATTTGTATAATAGACACACAGATTGGGGAGCATTTCAACGATACCTAAACGAAAACTTGGAACTAAAAATTAGCCTTAAAACCGAGGAAGATATCGATAACGCTGCTGAATATTTAACTAAAGCAATACAAAGAGCTGCCTGGTCTTCCACACCGCCACTTCAGGAATCAAATACTCTGAAAGACCAAAACGTGGCGAACATTGTAAAAGAAAAAGTCCTAGAGAAGCGGCGCCTCAGAAGAGTGTGGCACAGCAGTCGCCACCCAGCAGATAAAAGAGATTTCAACAAAGCAGCTGCTGATCTTAAACAGCTCTTggtaaatttagaaaatgagaCACTGCAACAACATCTGCAAAGTCTAACCCCAACAGCTCCAGCCAAGAACGAATATTCACTATGGAAAACGGTGAAATCTCGTGAAAAGCCACTTCCTTCTCGACATccacttaaaaatgaaaatggaacGTGGGCAAAAACGGTCCAAGAAAGAGCAGAAGCGTACGCCTTATTCTTGAGCAACGTATTCACGCCCAACACTGACATTGGAAACGAAAGTGTTGATCGCGAGGTTATGACGTTCCTTGAAACTGACTTACAGCTAAGTCCCCCCCTTAGATGCTGTACCCCTGCCGAAGTTCGTCGTATAATTATGAATCTGGAACTCAAGAAAGCCCCAGGGTTCGACCTGATCACGGCTGAGGTGTTGCGTAACATGCCAcggaaatgtattgtttttatcacTTCATTGTTTAATGCTGTGTTACGAGTTGCGCACTTTCCAAGTATATGGAAAGTCTCGCAGATAATAATGATCCCCAAACCAGGGAAGCCACCGCATTTAGCATCTTCATATAGACCAATTAGCCTCCTACCTGTGCTATCAAAAGTTCTCGAGAAGATTATCTCACTGCGCCTCAATGAAACTCTGACTGATAATGCAATTATTCCTGAGCACCAATTTGGATTTCGAAAGAATCACTCGACCATCGAACAAGTTCACAGAGTGTatgacacagcCATACTGTCAAATGACACAGATCCTGAAGTAGCATCAGAAAAACTGCAAGAACATTTAAATGATGTACATTCCTGGATGCACTCTTGGAGAATTAAAGCTAGTGGAACTAAATCACATCATATCACATTCACCCTGAGAAGAGAAGATTGTCCTCCTGTTAAATTAGGTCAAGAGGTCCTACCACATAACACAAGCGTAAAATACCTTGGATTTTACCTTGATAGAAAACAAACCTGGAAAACAAACATTCAGAAAAAGCGTGATGAACTGAACTACAGATATAGATCCCTAGAGTGGCTTATGGGTAGGAACTCGCGACTCACTGTCGAGAACAAGAATCCGTCCCTCTACGACGAGATCAAGCTGAAGCTTCCCGCCGACCTGGGCGACCAGCACCATCTCCTGTTCACCTTCCTCCACGTCTCATGCCAGAGGAAACCCGTCGCGCCCGACCATGAGAAGAACGTTGAGACTGTCATTGGATACTCTTGGCTCCCCCTATGCCGCAACGGCAAGCTGACCTGCGGCGAGTTCAGCCTGCCGGCCATGCAGGAGGAGCCTCCGCCCAACTACTCGTACATCTTCCCCGACGTGCTGCTGCCCGGCACCAGGTGGATCGACAACCACAAGCCGATCTTCAATGTGGTGCTTGACGCGCATTCTACTGTGCATCCGCTGGACGGGTACATCGAGCGCTTCGCAATGGCTTGCGAGGCTGTGCAAGAGGGTAACATACCCCCTAGGATTGGACTCACCAACATGGAGGCGGAACTTAGAGCCAGTATAGCAGAGCTGCCGACCGCTAGCGTGGAGGCCTTGGCGCGCTACCTGCCGGTGGTGCTGGACAAACTATTGCGGTTGCTAGTGGCGCCACCACTGCTCGCCGGACAAACTCTGAACATCGCGCAGCAGGTGTTCCTCTGCCTCGCTCACCTCTTCAGCGAAGCTACGAACATAAGCGAAGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCCTCGCTCACTGACAGAGACATCGGCCTGCCGCTGCCGCCCACTGGCGCGACGTGCGACGTGCACGGGCGCAGCGCGCTCATCAGCACGTACATCCAGTACCAGGCCACCATCCCGCGGCCTTCACTCACAGATAGGGACATCGGCCTGCCCCTGCCCCCCACTGTAATGACGGACGGTTCCTGTAAGATCCTGCACGAAGAACTGGCGTTGCAGTGGGTAGTTGCCAGCGGGGCTACACGAGAGCTCGCGATGCAGAATTCctgGTCGATGTTCGAGCTGATGGTGAAGTCTATGGTGGAGTACTTGTACTGGAGCGGCGCGGACGAGGCTCCACGCAAGGCGCGCTTCCCCGACCAGTTCACTGACGACCTCACGACGCTCGTCAATAACGTCACTGCTGAGATTATCTCGGGCTACGGCAAGAACAGCCGCCTGACGCAGAGCCTCAACAACAGCCTCGCGTTCTTCCTGTTCGACCTGATCAGCATCATGGACCGCGGCTACGTGTTCGGCCTCATCCGGACCTACTACAAACAGATGAGCGCCAAGATTGCCTCCTTGCCGGACGCCGTGCCCTTGGTGCATTACAAGCTGGCGTTCCTCCGCATCATCTGCTCCCACGAGCACTACGTGTCCCTCTGCCTGCCCGTCCCCCCGGGctcgggcggcggcgcggcctCCCCGGCCCCCTCGGCGCACTCGGCCGCCTCCCACTCGTCCCACAGCCACGCCCTCACACACGagttcaggtccaggcattactTGGCGGGGTTGCTGCAGACTGAACTGACTACTGCTTTGGAGCTGCAGTAA
Protein Sequence: MKLQNLDVLLISEAHLTDKLSFHINGFNTYATYHPSGSAHAGTAIIIRQSINHQLLPEFQTDKIQATSILIYDKQSPITLSSVYCPPKQNRNPETVEEDFNAYFESLGNRFIAGGDWNSKHTMWGSRLITTRGRNLHKCLRRRRLNILSTGQPTYWPADPAKLPDLLDFFIYKGVPTHFLDVESCFDSSSDHTPVIATVSSTIIKRAVPPYLYNRHTDWGAFQRYLNENLELKISLKTEEDIDNAAEYLTKAIQRAAWSSTPPLQESNTLKDQNVANIVKEKVLEKRRLRRVWHSSRHPADKRDFNKAAADLKQLLVNLENETLQQHLQSLTPTAPAKNEYSLWKTVKSREKPLPSRHPLKNENGTWAKTVQERAEAYALFLSNVFTPNTDIGNESVDREVMTFLETDLQLSPPLRCCTPAEVRRIIMNLELKKAPGFDLITAEVLRNMPRKCIVFITSLFNAVLRVAHFPSIWKVSQIIMIPKPGKPPHLASSYRPISLLPVLSKVLEKIISLRLNETLTDNAIIPEHQFGFRKNHSTIEQVHRVYDTAILSNDTDPEVASEKLQEHLNDVHSWMHSWRIKASGTKSHHITFTLRREDCPPVKLGQEVLPHNTSVKYLGFYLDRKQTWKTNIQKKRDELNYRYRSLEWLMGRNSRLTVENKNPSLYDEIKLKLPADLGDQHHLLFTFLHVSCQRKPVAPDHEKNVETVIGYSWLPLCRNGKLTCGEFSLPAMQEEPPPNYSYIFPDVLLPGTRWIDNHKPIFNVVLDAHSTVHPLDGYIERFAMACEAVQEGNIPPRIGLTNMEAELRASIAELPTASVEALARYLPVVLDKLLRLLVAPPLLAGQTLNIAQQVFLCLAHLFSEATNISEGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTGATCDVHGRSALISTYIQYQATIPRPSLTDRDIGLPLPPTVMTDGSCKILHEELALQWVVASGATRELAMQNSWSMFELMVKSMVEYLYWSGADEAPRKARFPDQFTDDLTTLVNNVTAEIISGYGKNSRLTQSLNNSLAFFLFDLISIMDRGYVFGLIRTYYKQMSAKIASLPDAVPLVHYKLAFLRIICSHEHYVSLCLPVPPGSGGGAASPAPSAHSAASHSSHSHALTHEFRSRHYLAGLLQTELTTALELQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -