Basic Information

Insect: Udea ferrugalis
Gene Symbol: -
Assembly: GCA_950022985.1
Location: OX465531.1:15495350-15502625[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.7e-10 3.9e-07 30.6 0.1 5 38 508 540 504 544 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.7e-10	3.9e-07	30.6	0.1	5	38	508	540	504	544	0.90

Sequence Information

Coding Sequence: ATGGGTGATAATAACGACGTGAGGGCTTGTAGACTATGCCTCGCGTGTAATGTTAAAATATTCCTCATAGATTCATGTCTAGAAAATAGTTTGAGAACTTTTTTAGGACAAAATataaCATATACATCAGGATTGCCCAAGTATGCTTGTTATGAATGTACtgcattattgaaaaaaatcaaATGGTTCAAGAATAAATGCCTTGTAGCCCAAACTGTTCTTTTTAGTTTGCTGAAATTGCAAAAAGTGgtgaCTGAAAATAGCATTAAAAAGATTGACAGAAAAAAGATATCATTGCTATCAAATTTACACACAACCAAAATAGACGTTCATTCTTTTACTGATTCTGCAGAAGGAGAAAATAAACCTTATGAAGCTGATATTGAAAGTGTAGAAACAGGTGTATTTTTACAAGAGGATTATTTAGATAATGATGATATGGAAAATGGTGTTATCAATGATTCAGATTTACACACGTATGTTGTTGACTCCAAGATGGATGTTAATGGCTTGGATTTATCTTGTGAGGAAGATCATGCTTCAGATAATGAGGATAATATGACATTGCATAAAGTAGCTAAGATGAAAAAGtCAAACACTGTGTCTTCTGGAAGAAAAGGCTACACTTCCAAGAGCAGTAAAAAAAAGAAGTCaaccaaaaaaattacaacgaaTAAAATTACAGCCAAAGAAATGGCTGCCAGTAAAAGGAACATTAAAATAACTGCAGAAAAACTTCTTCAAGTCAGTGAAGAAAAAGATGTCAATTTTTGGGATTTAGCTAATGATTTCACCATAAATATACTGTCAATTATATTTCAGTTAGAAGAACAAAAAGCTGCAATCGAGCAGAGGAAGAATTCTGATTTCTTTAAATTATCAGAATTCAAATGTGACCTTTGTTACAAAGGTTATTCAGAGGAAGACAAGTATCTGAGCCACATGAAGTGCCACAATCCTGAACTGCAAGTGGTGTGTGAAGTGTGTCGCGCGCGCTTTTGCAGCGAAGCCGAACTAGTATCACACGCGGCGGAGCACTCGCGGGGTTACTCCTGTAACCGCTGCAGCTACGGGACCACTCAAATCCATCAAGCTAAACTACACAGACAGTCCCATAAAGCTGCCGATGTGATTCGGAATGGAGTAGATTCCATCAAGATGGACACGAATGGTGAAGCCGATTGGTCGTACGCTTGTGACCAGTGCGGGAAAGGGTTCGCCAGCAAGCGGAGTTTGGTTTGTCACAAGAACAGATCACATAGAGATCGTACGCGAATGAAAACCCCGGAGcacaatgatgatgattacgAAGCTTTGTCAGATCCAAACGACGTGGAGGCCGCGGCTGGCTCCGATTCGGACCACTCAGACTGGGACAGCAAACCGTCTGTCAAAGCAAAGTCCGAGCTGTTCTGCAAGAAATGCCGCATACAGTTCTCTACGAAGGCGGCTTGGAAGCGACACAAACTTTTAGGACACAAGAAAGCAGTGATCAAAAAGCCGGAATACGACCCAAGCGTTTTGGTCCTAGCAACCCACGCGGTTAGGCTGGGCGTCTCCAAAGCGAAAGCGGCTCGCACCTACAACATACCTAGATCAACGCTACATTACAGACTCAGCCAAAATAGAGAAATAAACGGCAAGGGCCCTGCTCCTATATTCAGCCCAGATGAAGAGAAAGGGATCGTTCGTTGGGTGATGGACACGGAACCGAAAAATGTAGAAATCGAAGTGCGggaaaaagtaaaggaaatgtTGAAAAACGATCCTAGGGCCAGCAAGTTCATCGACGGTGCGCCGGGAAGGAAATGGTTTACCGGCTTAAGAAAAAGGCAACCAGAGCTAAATAGATGGATGCAATTAAGGAAGCTTCAATAA
Protein Sequence: MGDNNDVRACRLCLACNVKIFLIDSCLENSLRTFLGQNITYTSGLPKYACYECTALLKKIKWFKNKCLVAQTVLFSLLKLQKVVTENSIKKIDRKKISLLSNLHTTKIDVHSFTDSAEGENKPYEADIESVETGVFLQEDYLDNDDMENGVINDSDLHTYVVDSKMDVNGLDLSCEEDHASDNEDNMTLHKVAKMKKSNTVSSGRKGYTSKSSKKKKSTKKITTNKITAKEMAASKRNIKITAEKLLQVSEEKDVNFWDLANDFTINILSIIFQLEEQKAAIEQRKNSDFFKLSEFKCDLCYKGYSEEDKYLSHMKCHNPELQVVCEVCRARFCSEAELVSHAAEHSRGYSCNRCSYGTTQIHQAKLHRQSHKAADVIRNGVDSIKMDTNGEADWSYACDQCGKGFASKRSLVCHKNRSHRDRTRMKTPEHNDDDYEALSDPNDVEAAAGSDSDHSDWDSKPSVKAKSELFCKKCRIQFSTKAAWKRHKLLGHKKAVIKKPEYDPSVLVLATHAVRLGVSKAKAARTYNIPRSTLHYRLSQNREINGKGPAPIFSPDEEKGIVRWVMDTEPKNVEIEVREKVKEMLKNDPRASKFIDGAPGRKWFTGLRKRQPELNRWMQLRKLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -