Ufer000262.1
Basic Information
- Insect
- Udea ferrugalis
- Gene Symbol
- ttk
- Assembly
- GCA_950022985.1
- Location
- OX465515.1:3518113-3524474[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-16 6.9e-13 49.0 0.0 1 42 408 450 408 453 0.94
Sequence Information
- Coding Sequence
- ATGTCGCAGCAGTACAGTCTACGGTGGAATAACCACCAGCCGAACTTCATATCCATGTTCACGACACTGCTCAACACGCAGACGCTCGTGGACGTGACCCTGGCTGCGGAGGGAAAACACTTGCAGGCTCACAAAGTGGTCCTCTCTGCCTGCAGTACATACTTCCAGGCGTTGTTCGTGGACAATCCGTCGCGCCATCCCATCGTCATCCTGAAGGATGTCTCCTTCGCGGATCTCCGGACGATGGTCGACTTCATGTACTATGGAGAAGTCAACGTCACCGAGGAACAGTTACCACAGGTGCTGGACACAGCGAAGCTGCTGAAGATCAAGGGTCTGACGGAGATGCCGGACTCGACGTCGCTGACGCGGTCGCAGGGCACCTCGGCCGACTTCCAGTCGCCGGGGGAGTCCGTCGACTCGCAGCGACACTCCGCCTCGCCCGCAACATCGCCTAGCAACAAGCGCAAACGATTTGTGCGCAGGAAAAGCTCAACGGGCTCGACATCCCTGAACATGGTGAACGAAGAGGTTCGGCCGGAGGACGGCGCGCCCTCAGTGGACCTGGTCCATCGGGAGACCATCACGCTCAGCAGCGTCCCGCAGCAGCGCCGAAGGGAGTTCGACGAACGGGCCATGGAGAACCACCAGGCGAAGCACTTCATTTCTTTGGAGTGCCCCTTTATCACCCCAGATTGTTGGAGAACTACCTCCGAGGCAAAGAAGTTTTATGAGTGGAACAATGGAGTCCTCATCCATCGACCGCTCAAGTGTGAGTTCCTCTGGGGATCGTCTTTGAGTCCTCTTATGGAACCCAGGCCACAACCAGTCCTTACTCTATCTACACAGCGTGACGTGAAGAACCCAGTTTTTCCATGCACCCATAGCAAAACGGCAGAGCCCCACAACATGAACGTGGAAGCGCTGGCGATGGACGCCAACCCTGCGGGGATCCCCCAAGGGGGCCAGTGGAGTATGATGGAGCATACCTACCCGCGGTATTCGAACGCGTGCATCGGAGGGGGTGCCTTACAGGCTGATCCTGGCCTGTACATGAACAACGTAATGAACCCCCACATGGATGCAGAGCTAAACGACTACGGCCAGGGCTTGGGAGTGACTGGGCCTTCGCCCGGCCCCAGCTGCGTCGCCGAGGCCCAGACCCCCCAGGAACCCCCTCCACAAGTGCAGCCGAAGCGGAGACGCACCACCAATCCGCAATCGGAAGAAAACTTCCAAAGAGCGCTCGAGGCCGTCCGCTTCGGCGGCATCGGCTTCTGCAAAGCTGCTAGAATGTTCGGCGTCAACAACAGGACGCTCTGGCTCGAATACAAGAAGAAAGGATACCCGAACAACCGACCGAGCATAAAAAGTAGAATCAAGCGCGAACACACAACACCTCCTCCGGAGCACAAAGAAGAAATGCCTCAACCGGAACAACAGATGGCGTTGCTGTGCCCCCCACACCCGGTGCCAGTGAGTTTTATAGATTCGCGACCGATTGATTTCCCTCTTCAGGGGGTGCCTCACAATTCGCCCCTGAATATTTTGGGGGTTAATTTTAATACGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVSFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADFQSPGESVDSQRHSASPATSPSNKRKRFVRRKSSTGSTSLNMVNEEVRPEDGAPSVDLVHRETITLSSVPQQRRREFDERAMENHQAKHFISLECPFITPDCWRTTSEAKKFYEWNNGVLIHRPLKCEFLWGSSLSPLMEPRPQPVLTLSTQRDVKNPVFPCTHSKTAEPHNMNVEALAMDANPAGIPQGGQWSMMEHTYPRYSNACIGGGALQADPGLYMNNVMNPHMDAELNDYGQGLGVTGPSPGPSCVAEAQTPQEPPPQVQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEMPQPEQQMALLCPPHPVPVSFIDSRPIDFPLQGVPHNSPLNILGVNFNTMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01503098;
- 90% Identity
- iTF_01503098;
- 80% Identity
- iTF_01503098;