Ufer011292.3
Basic Information
- Insect
- Udea ferrugalis
- Gene Symbol
- kn
- Assembly
- GCA_950022985.1
- Location
- OX465524.1:12200715-12212277[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-142 3.1e-138 462.5 0.0 182 387 10 233 6 238 0.98 2 2 1.3e-08 0.00011 21.6 1.4 418 468 240 292 234 331 0.83
Sequence Information
- Coding Sequence
- ATGCGGTTCAATTTGAGTTTTTGTTACAGATTTTTCCTCAAATTCTTCCTCAAATGCAACCAGAACTGTTTGAAAAATGCCGGCAATCCACGAGACATGAGAAGATttcaaGTGGTAATATCAACGCAAGTGATGGTGGACGGCCCTCTCCTCGCGATATCTGACAACATGTTTGTGCACAACAACAGCAAGCACGGCCGGCGCGCCAAACGGCTCGACCCCACTGAAGGTATTGACGCCGCGCCCGAGACTACTTCGGGTCTGTACCCTCCGCTGCCAGTGGCGACGCCGTGCATCAAGGCTATTTCTCCCAGTGAAGGGTGGACGTCTGGTGGGTCCACGGTGATCATAGTAGGGGACAACTTCTTTGATGGCTTGCAAGTCGTCTTTGGAACCATGCTAGTTTGGAGTGAGCTAATAACATCCCACGCGATAAGGGTGCAAACCCCGCCCCGGCACATACCTGGAGTGGTGGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGAGCTCCGGGGAGATTCGTTTATGTTTCAGCTCTGAACGAGCCCACGATAGATTACGGCTTTCAGAGGCTACAGAAACTGATTCCGAGGCATCCTGGCGACCCAGAAAAGTTACCTAAGGAAATCATACTGAAAAGAGCGGCAGACCTAGCCGAGGCGCTGTACTCGATGCCGCGGAACAACCAGCTCGGGCTGAGCGCGCCCCGCTCGCCGCCCGCCAGCATGCCCTTCAACTCCTACACGGGGCAGCTCGCCGTTAGCGTGCAGGATACGGCCGCCTCGCAGTGGACCGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTCTCGCCGCGCTACTGCTCCGCCGCGTCCACGCCGCacgcgcccgccgccgccgcctacCCCCCGCACCCGCAGCACTACCCCGCGCCGCCGACCTCGCTCTTCAACTCTAGCTCGCTGTCCCTTGGCCCGTATCATCCAGCGAACATGAATGGACATTTGCCATCTGACCATCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAGGCGGCTGACTATCCGGCAAACACTCATGCAAAATGCACGGACGATGTGAAAGGGCCTCACAGTAGAGAGAGTAAACTGAGGAGCGCTTTTGCCGTCGTTCGGCACAGCCCGCCGCGGCAGAATGCTCACCACCATCAAAACTGGCAGCATCTCGCCGTACAGTtTCGTTTGTTCACAGGAATGGGCGGACTCGTATCATCTCCATTCTCCGTTAACCCGTTCTCACTACCGACGTGCAGCGCTCAGCAATACGCGCAGACAGCGCCTCTAGCGTCCAAGTAG
- Protein Sequence
- MRFNLSFCYRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPETTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLSAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAPAAAAYPPHPQHYPAPPTSLFNSSSLSLGPYHPANMNGHLPSDHHYNAYNTKDSGHYSERNGNSKAADYPANTHAKCTDDVKGPHSRESKLRSAFAVVRHSPPRQNAHHHQNWQHLAVQFRLFTGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01569051;
- 90% Identity
- iTF_01503637;
- 80% Identity
- -