Tjac012281.1
Basic Information
- Insect
- Tyria jacobaeae
- Gene Symbol
- HIVEP1
- Assembly
- GCA_947561695.1
- Location
- OX387209.1:8999892-9006291[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00015 0.012 16.5 0.6 1 23 145 167 145 167 0.98 2 8 0.00061 0.049 14.6 1.2 1 23 173 197 173 197 0.89 3 8 0.0018 0.14 13.1 0.0 1 21 418 438 418 439 0.95 4 8 2.5e-06 0.0002 22.1 2.0 1 23 1197 1219 1197 1219 0.99 5 8 5.6e-05 0.0045 17.9 3.2 1 23 1225 1249 1225 1249 0.92 6 8 9.2e-06 0.00074 20.3 0.9 2 23 1656 1677 1656 1677 0.97 7 8 0.00027 0.022 15.7 1.5 1 23 1683 1707 1683 1707 0.92 8 8 0.0012 0.097 13.7 2.6 1 23 1728 1752 1728 1752 0.93
Sequence Information
- Coding Sequence
- ATGCCGTTAACGCAGGAAAAACGTTTAGATAGTAACTTTGCCAATAACAATGACCACAGCTATCTACACAAGAAGTTCAAAAAAATGGCATCTACAATGTCTGTCTTCCCCGGTAATTTAACGAAATCCGGCGATACCAGACATAAAGAGGCAATCGTATCTACATCTTCTGGCAGTCTATCAATTTCTAATGGTAGTATTGCCGCAGCTCATCCAGAAATAGAGAAAATTAAAATGAAGGATTTAGAACTTCAGAACACTTTGAAAAATGTACAAATTAATTATAATGAAGAAAATCTTAGATTAAGTAATGTAAATAATATTGTTCAAGTATCTGGTCAGACCAGTTTTACTGATGAATTTTCAAATAAGACTGAAAATCTTGAAAATGATTTAATCAAAGACGCCCACAATGTTGCGGTAGGTGGACGATATATATGCCCCTACTGTAAATTATCTTGTGCCAAGCCTTCGGTTCTCCAAAAACATATCAGAGCTCATACTAATGAGAGACCATACCCTTGTGTACCCTGTGGATTTGCTTTTAAAACTAAATCTAATTTATACAAACATCGAAGATCAAGAACTCATGCATTAAGATTACAAGGGCAGGACGTGACAGTTACATTAAATGAAGAGGATTTATCAGGTGGGTCGGAAAGCGATACATCGATTCCACCTACATCCATATCAGAAAATAGCTCGGATGTTTCTATCATACGTGTTGAAAATGTGGAATCAAGTGATTCGACAGAAATATCCATTGATAACATGCCATCGACCAGCGTATATTTAAATGATAACATTAAGTCGAAATCAATATACAAGCCCAAATTTAGGGCAGCACTATACCAAGATTGTGAAGAAAAAGATAAAGCAAAGAAACCGATTTCACCGAATGCTGACTTCCTTACAGAACATATCTCTAAAATTATATCAGAAAACGAAGCTATTGTTGACGTTATAGATACCCCTTTGCAGAAGAAATATGGAAAGATAAAACAAAGAGCTGAAAATAAGCAGTTAATTGACTTGGTAGAAATAAAGTCAGAACCATCTCCACTGAATTTAACAAAATCGAATTATGAAAATGAAACTTCTTTTAGGAAAAGATCTCACTCGGAAAGTTTTTCTCAGAATGACTATCATAAACATCCACTAAATCCAGAAGGTTCCATCATAAAAGATCTCTTGCTTAAAACAAAAATGAATGGATTAGGGCCAGTGACAGAATTAGTTGATGGGCCACTATTTGTGTGCCCTCTATGTCAGATAATCTATCGAAGTGCAGATAATTTAGAAACACATAGAATGTATTATTGTAAAGGAAGTCTAAGTAACAACACATCTCAAAAAGACATGAAAGCTATGAGGCCCGAAAACGTGTTTGTAAGAAGTAATTCAGTCAACGTAAGATTACCCGAGGCATCATGCAATTCATTTTCTAGATGTAATAACACGACAAAATTGTCGCCGTCTAGAATTAAGCCAGAGAACCTGGTTATTATGAAGCCAGAACCAAATGATGTTGTAGCTCCATTGCCATCTCCAGGACCACTTCTTGGTAATACAAGACTTGTAGATACTAGAGTGCCATCAGATTTTACAAGAAAAACTGAAAATCTAAAAGTAAGACCTGTAGCAAGCCCAAAAAGAAGAATTGATAATAGGTCTGATTCTTATAGTCCTAGATTAATTGAAAACATTTCACCTAGAACAACTGATTTATATTCTCAACCCAAGATCAGATGTATCGATGTAAACTCTGCAGCACTAAGATCACTGGATGAAATATCGCAACACATAAAACATAATTCAACTTCTCTACAAATGTTTGGAGGTGAAGTAAAAATTCTCGATCAATCTGGGAGCACAACTACTCTACGAATAGAACCAAGCAAAAACCAATTATCCCCTATATTAATACAACAAAACCTTTCACCTTCAAAACTTGGTAATGACGCAGAAGCAAGTAGCGTTGTTGTAAGATCAGGATTACATTCAGGTGGAACAATAATGCATAATCCTCCAACACCTAAAGAAATGGTGGGGACTCCACAAGCACAAACACCTAGAATCACAATATCAACTGCAACATCTCTATCTAATTCAAATTTACCTAATATAAATGACATAACTCATTTTCAATTTCCGCCTCTTAGTGCTATTACAGCATTTAATCCATTAACTTTACCACCTCTAAGTCCTTCATCACCAAATGGTGCTACGACAATATTACATGCTGGAAAACTCATACCTCATGTGCCAGGTATGCCTGGACCAAATACAGCAGGAGTTTTTGTTGGAAACTCGAACTCCCAGTCAAAGAGCAGTATAGCAAACACGGATATTATTACAACTTCCTTACAGTCTACCAGAGGTGATATGAATGGATCTTTACTAGCCATGAGTGCTCAATGTGCAAAAGGTACAATATTTAAGTATGATACACCACAGTTACGTAATAGTAAAAGCCCGAATTCTAGATTACCGCACATAGAACTAGAACAACAGAGGTCAACTCCAGACGCCATTAACAATGATATACAACCTCATTATCTTTCTCATGTTCCTATAATAAAAGCAAAGAATGTGGAGGGGCCTAACTTGCTTTCGACAAAGACTTTAGTTAAATCAATGCACAGACAAGATGGAGCTATCAAAAGGAATTCTGAAGGGGTGCCAAGAACGTGTGTTTTAAAAGAGAATATTATTTACTCTTCAGGTAAACTTAAACTAAACAAAGATAAACTGAATAGCAATTTCTCATTTAAAAATGCAAATGAAAGTAAACCTGAAAAAGGTTTAAGAAATTTCAATTTCGAAAATTTAATAACGAAAGCTGAAATATATAATAATAATGAAATACCTAGTTCATCGGAGGTCCAAAAGAATACTAATGCTCAAGACACGCGAGCGGTCTCGATCCAAAATGAAAGGTCTGAAACATCTTACTTTCAGAAAAATATAATACCAAAAGCTGTTGAAGACGATAGAAAACCAAAATTTTTACGACCATCAACATTACCTTTAAAACCAGGTACCTTCACTCCTAAAAGACATCATGGCATTACTCCGAATGCAAATACTATGCCACTTGTATCACCCGAGACTCCTCGACCCGCTAAAGCTTATGGGCAACTATATTTAAATGGAAATGCTTACACGTATCTAGGACTAAAATGTTCAACAAAGGTTTTCTATTGTACAATCAATCGTCCTCAGCCAACATATGTTCCAAAGCAAGAGTTTCTATCAATGTACAGCAACTGGCAGTTATTATCTGAGTTGACGCCAGATCCACTGGGGCTCTCAGCATCGTCTGCCATGTCTCTTTATGACTCACGTCATCGACCGCAAAACGTAGCTGTTGCTGTGATAAAACAGGATCTAATTCTGACTCATTCATCGCAATGGAATACATTTTCCAAAGATAATAAACAGATTACCCATTCGATTGATTCTAAGAAAATGGAGGAAAATAAATACCCAGTTTGTGACAACATGGTCACTCCTAAAAAAGAGCTAACTGGTGGTTTTGAAAGTAACGAAGAATATACGTATGTCCGCGGCCGTGGAAGGGGACGGTATGTTTGCTCTGAATGTGGAATACGATGTAAAAAACCTTCGATGTTGAAGAAACATATACGTACTCATACCGACGTACGTCCTTATACCTGCGTACACTGTGCATTCAGTTTCAAGACAAAGGGGAATCTAACGAAACACATGAAAAGTAAAGCGCATTACAAAAAGTGTTGTGAATTAGGAATAAATCCAAATGAAGGTAATGACGCAGAGAGTGCAGAAATGGCTCAATGCTCGGGCGAAACAGACGACGACACAGATTCTGAAGGTGACGAGGGGAATGAAGGAGAAACTGAGTCAAGTGACACGGAAGTTTACAAATCCCGATTGCCAGAACACGAGGCTGCTCATTGTTTATTATCTCTGGGAAGTGCAAGGCCGACAACGTCAGCAACACCTGGTTTAATTACAAGCGCTAGACCAACCACTTACCCATATACACCAACAGGACTAGACAATATTTCTGTTGAAATAAACCAAGAAAGGGCAAATAATGCTAAGTGTTCTCCCATAGAATCGGTAGCTAGTTCTGATAATGAACCAATGGACTTAAGTAAAAGTGATTTGAAACCATCCTCACCAAACATTCCTGAAATTCCAACTGCTAGGGAATCAAGTGTTTTAGCCTCTTTAGCTTCAAATACTGCTAAGGCTAAACTTCCAAATAATCAGATTCAATGGTCCAATGGAGAGCCGATGTTGCATACCTACCTGACCGAAAGAGCATTACAAGATTCTAAGATTAAGCAAAGTCAACTAACAAGCAGCTTAAGTAAAGTTAGGAAAATTGATGCGGAAAAGTCATCTTTCATCGATAGCTACACCTCTATAGATACAAAAAATAAAACGACCAACTCTGTCAAAAGTTCCCTAATGACGACAGCGTCTTCTGGTCAAATGATTTATACAGAATCAAAAAAAATTGATGTGAATGCATCTGACAATAATGATACAATAGTTTCGACTGATATCCCGGATATCCCGAAGAGTAAAGAAAGTTCTAATTCAAGTAATTTGGTGAATAATGTGAAAGGAAATGTTACACAGCCTTCAAGTAACGCGGAAAATGCTAAGCATGTGGTATCTGAATATTTAAAACACGCTAGAATAAATCTTATCAAAACACATGAAGACGGCCCTCAAAATCAGAATGAGAATATAAGCGATGATAACACTATCAAAAGTAACGAGGATAGTACCAAGGACGATGAATTTTCATCGGAAGTAGAAACAAAGAAACTTCCTTCTTTAGATCATGACCCTGTTGCTAGGAAAGTAGTTATAGGTGTTGGAGGTGTAGCCTTTAAAGTTACAAAAGGAAAAGATTACGAAAATGCATCTTACTCACCAGGACGGTTGATGGAAGACGGGCGCAGAGTTTGTGACTTTTGTAATAAAACTTTTACAAAACCATCACAGTTAAAATTACATCTCAATATACATTATATGGAACGCCCTTTTAGATGCAGTGTATGTGCCGTAAGTTTTCGAACTAGAGGACATCTTCAAAAACATGAACGTTCAGGTTCGCATCATAATAAAGTCTCAATGACTTCAACATTTGGAGCTGCAACATCTTTTAACCCGAGACCATTTCGCTGTTCCGATTGTAATATAGCGTTTAGAATACATGGTCACTTGGCTAAGCATCTTCGTAGTAAAATGCACGTAATGCGTCTGGAATGTTTATTTAAATTGCCTTTCGGAACATTCACGGAAATTGAGCGTGCAGGTGTTAGTTTAACTGATATTGATACCACAGACTGCGCCAGTTCCCTCGCCAGTTTGCAGACTCTCGCTCGTAAACTCCATGAAAAGGATCCAACGAAACTGGAATATAGGGAACCTAACAGTGCAAACCTAGTGGGACCACCTGCTGGCAGGGAGTCCTCGGAAGATGAAGATTCTGTTCCCTGTGAAATTATGTGTGAAAGTGACAAAGACAGTGAAGCTAAAACTATTGAGAGTAGTGATAGTCAGGATAATGGTCAAGATAAAGACGTACGAGTTAATTATAGTGCCACAGATATTTAG
- Protein Sequence
- MPLTQEKRLDSNFANNNDHSYLHKKFKKMASTMSVFPGNLTKSGDTRHKEAIVSTSSGSLSISNGSIAAAHPEIEKIKMKDLELQNTLKNVQINYNEENLRLSNVNNIVQVSGQTSFTDEFSNKTENLENDLIKDAHNVAVGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRTHALRLQGQDVTVTLNEEDLSGGSESDTSIPPTSISENSSDVSIIRVENVESSDSTEISIDNMPSTSVYLNDNIKSKSIYKPKFRAALYQDCEEKDKAKKPISPNADFLTEHISKIISENEAIVDVIDTPLQKKYGKIKQRAENKQLIDLVEIKSEPSPLNLTKSNYENETSFRKRSHSESFSQNDYHKHPLNPEGSIIKDLLLKTKMNGLGPVTELVDGPLFVCPLCQIIYRSADNLETHRMYYCKGSLSNNTSQKDMKAMRPENVFVRSNSVNVRLPEASCNSFSRCNNTTKLSPSRIKPENLVIMKPEPNDVVAPLPSPGPLLGNTRLVDTRVPSDFTRKTENLKVRPVASPKRRIDNRSDSYSPRLIENISPRTTDLYSQPKIRCIDVNSAALRSLDEISQHIKHNSTSLQMFGGEVKILDQSGSTTTLRIEPSKNQLSPILIQQNLSPSKLGNDAEASSVVVRSGLHSGGTIMHNPPTPKEMVGTPQAQTPRITISTATSLSNSNLPNINDITHFQFPPLSAITAFNPLTLPPLSPSSPNGATTILHAGKLIPHVPGMPGPNTAGVFVGNSNSQSKSSIANTDIITTSLQSTRGDMNGSLLAMSAQCAKGTIFKYDTPQLRNSKSPNSRLPHIELEQQRSTPDAINNDIQPHYLSHVPIIKAKNVEGPNLLSTKTLVKSMHRQDGAIKRNSEGVPRTCVLKENIIYSSGKLKLNKDKLNSNFSFKNANESKPEKGLRNFNFENLITKAEIYNNNEIPSSSEVQKNTNAQDTRAVSIQNERSETSYFQKNIIPKAVEDDRKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPKQEFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVAVAVIKQDLILTHSSQWNTFSKDNKQITHSIDSKKMEENKYPVCDNMVTPKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNDAESAEMAQCSGETDDDTDSEGDEGNEGETESSDTEVYKSRLPEHEAAHCLLSLGSARPTTSATPGLITSARPTTYPYTPTGLDNISVEINQERANNAKCSPIESVASSDNEPMDLSKSDLKPSSPNIPEIPTARESSVLASLASNTAKAKLPNNQIQWSNGEPMLHTYLTERALQDSKIKQSQLTSSLSKVRKIDAEKSSFIDSYTSIDTKNKTTNSVKSSLMTTASSGQMIYTESKKIDVNASDNNDTIVSTDIPDIPKSKESSNSSNLVNNVKGNVTQPSSNAENAKHVVSEYLKHARINLIKTHEDGPQNQNENISDDNTIKSNEDSTKDDEFSSEVETKKLPSLDHDPVARKVVIGVGGVAFKVTKGKDYENASYSPGRLMEDGRRVCDFCNKTFTKPSQLKLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQTLARKLHEKDPTKLEYREPNSANLVGPPAGRESSEDEDSVPCEIMCESDKDSEAKTIESSDSQDNGQDKDVRVNYSATDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -