Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_947561695.1
Location
OX387217.1:19278739-19280325[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.4 4.9e+03 -1.9 0.0 15 25 31 41 30 42 0.77
2 4 2.9e-18 3.2e-15 56.4 5.0 2 52 46 96 46 98 0.97
3 4 8.8e-05 0.099 13.2 0.6 33 54 91 112 90 118 0.90
4 4 7.2 8.1e+03 -2.6 0.0 22 39 142 159 136 167 0.73

Sequence Information

Coding Sequence
ATGACCGCTCCAATCATCATCACTGTGCCGAACAACTATCTAGCTGTGGATGAAATGGAGATGAAATCGAAGGTAGTGGTCGATGTGGTATCTCCAGCTCCATCCAGAAAGCGCCGCCTAGACCATTTATCATGGGAGGAAAAGATGCAAAGAAAGAAGTTGAAGAACCGTGTAGCGGCCCAGACATCGCGTGATAGGAAAAAAGCAAAAATGGACGAGATGGAGTCAAGAATTCAATACTTTATGGATATGAACGAGCGTCTTACTAGCGAAGTAGAGAGCTTAAAAGCTTTAAACGAGCGTTTGTTGAGTGAGAACGCATCTCTTCGCAGCAAGGCAGCGGCGCGGACCGTCGCGGGAGCCCCCAGACCAGCAGAGTCTGATCCTCCGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTATCGCAGACCTCCTCGCTCACTTCGACTCAGAAGAGTATCTCGACACCCTCAATCAACTTGCAGAATCACTCCTCAAAGAAATTGATGCAAGTGCTGCGGGAGCGGCTGAAGATGAGCCAGTCAGGGACTCTAGAGAGTGCCTTGAAGGAACTAAAGTGGTGGGGACCACAACAAAGCAACTGGAACCCAGTGAAAGTGCAGTCTTAG
Protein Sequence
MTAPIIITVPNNYLAVDEMEMKSKVVVDVVSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQYFMDMNERLTSEVESLKALNERLLSENASLRSKAAARTVAGAPRPAESDPPQKEGPPTAIRAARLLLAMCLLSQTSSLTSTQKSISTPSINLQNHSSKKLMQVLRERLKMSQSGTLESALKELKWWGPQQSNWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00869363;
80% Identity
-